data_1RFI
#
_model_server_result.job_id            WN1JBil7UkgIB-5DlSMD_Q 
_model_server_result.datetime_utc      '2024-12-01 01:29:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1rfi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":699}' 
#
_entry.id    1RFI 
#
_exptl.entry_id    1RFI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              114.939 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'VANADATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1RFI 
_cell.length_a            49.82 
_cell.length_b            104.832 
_cell.length_c            193.539 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1RFI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
? trimeric 3 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,G,H,J,L,N 1 1 
B,D,F,I,K,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O3' DC 4 D DC 806 1_555 G V VO4 . A VO4 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.818 ? 
metalc ? metalc2 B O3' DC 4 F DC 806 1_555 I V VO4 . B VO4 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.833 ? 
metalc ? metalc3 C NE2 HIS 140 A HIS 263 1_555 G V VO4 . A VO4 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
metalc ? metalc4 G V VO4 . A VO4 699 1_555 E OH TYR 4 C TYR 723 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc5 D NE2 HIS 140 B HIS 263 1_555 I V VO4 . B VO4 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? 
metalc ? metalc6 I V VO4 . B VO4 699 1_555 F OH TYR 4 E TYR 723 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? 
#
_chem_comp.formula           'O4 V -3' 
_chem_comp.formula_weight    114.939 
_chem_comp.id                VO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'VANADATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
V O1 VO4 doub 564 n n 
V O2 VO4 sing 565 n n 
V O3 VO4 sing 566 n n 
V O4 VO4 sing 567 n n 
#
_atom_sites.entry_id                     1RFI 
_atom_sites.fract_transf_matrix[1][1]    0.020072 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009539 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005167 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 VO4 A 1 699 699 VO4 VO4 . 
H 5 SPM A 1 999 999 SPM SPM . 
I 4 VO4 B 1 699 699 VO4 VO4 . 
J 6 HOH D 1 700 700 HOH HOH . 
J 6 HOH D 2 704 704 HOH HOH . 
J 6 HOH D 3 912 912 HOH HOH . 
J 6 HOH D 4 913 913 HOH HOH . 
J 6 HOH D 5 1001 1001 HOH HOH . 
K 6 HOH F 1 809 809 HOH HOH . 
K 6 HOH F 2 919 919 HOH HOH . 
L 6 HOH A 1 701 701 HOH HOH . 
L 6 HOH A 2 705 705 HOH HOH . 
L 6 HOH A 3 706 706 HOH HOH . 
L 6 HOH A 4 707 707 HOH HOH . 
L 6 HOH A 5 708 708 HOH HOH . 
L 6 HOH A 6 709 709 HOH HOH . 
L 6 HOH A 7 710 710 HOH HOH . 
L 6 HOH A 8 711 711 HOH HOH . 
L 6 HOH A 9 712 712 HOH HOH . 
L 6 HOH A 10 713 713 HOH HOH . 
L 6 HOH A 11 714 714 HOH HOH . 
L 6 HOH A 12 715 715 HOH HOH . 
L 6 HOH A 13 716 716 HOH HOH . 
L 6 HOH A 14 717 717 HOH HOH . 
L 6 HOH A 15 718 718 HOH HOH . 
L 6 HOH A 16 719 719 HOH HOH . 
L 6 HOH A 17 720 720 HOH HOH . 
L 6 HOH A 18 721 721 HOH HOH . 
L 6 HOH A 19 722 722 HOH HOH . 
L 6 HOH A 20 723 723 HOH HOH . 
L 6 HOH A 21 724 724 HOH HOH . 
L 6 HOH A 22 726 726 HOH HOH . 
L 6 HOH A 23 727 727 HOH HOH . 
L 6 HOH A 24 728 728 HOH HOH . 
L 6 HOH A 25 729 729 HOH HOH . 
L 6 HOH A 26 730 730 HOH HOH . 
L 6 HOH A 27 731 731 HOH HOH . 
L 6 HOH A 28 732 732 HOH HOH . 
L 6 HOH A 29 734 734 HOH HOH . 
L 6 HOH A 30 735 735 HOH HOH . 
L 6 HOH A 31 736 736 HOH HOH . 
L 6 HOH A 32 737 737 HOH HOH . 
L 6 HOH A 33 738 738 HOH HOH . 
L 6 HOH A 34 739 739 HOH HOH . 
L 6 HOH A 35 740 740 HOH HOH . 
L 6 HOH A 36 741 741 HOH HOH . 
L 6 HOH A 37 742 742 HOH HOH . 
L 6 HOH A 38 743 743 HOH HOH . 
L 6 HOH A 39 744 744 HOH HOH . 
L 6 HOH A 40 745 745 HOH HOH . 
L 6 HOH A 41 746 746 HOH HOH . 
L 6 HOH A 42 747 747 HOH HOH . 
L 6 HOH A 43 748 748 HOH HOH . 
L 6 HOH A 44 749 749 HOH HOH . 
L 6 HOH A 45 750 750 HOH HOH . 
L 6 HOH A 46 751 751 HOH HOH . 
L 6 HOH A 47 752 752 HOH HOH . 
L 6 HOH A 48 753 753 HOH HOH . 
L 6 HOH A 49 754 754 HOH HOH . 
L 6 HOH A 50 755 755 HOH HOH . 
L 6 HOH A 51 756 756 HOH HOH . 
L 6 HOH A 52 757 757 HOH HOH . 
L 6 HOH A 53 758 758 HOH HOH . 
L 6 HOH A 54 759 759 HOH HOH . 
L 6 HOH A 55 760 760 HOH HOH . 
L 6 HOH A 56 761 761 HOH HOH . 
L 6 HOH A 57 762 762 HOH HOH . 
L 6 HOH A 58 824 824 HOH HOH . 
L 6 HOH A 59 825 825 HOH HOH . 
L 6 HOH A 60 826 826 HOH HOH . 
L 6 HOH A 61 827 827 HOH HOH . 
L 6 HOH A 62 829 829 HOH HOH . 
L 6 HOH A 63 830 830 HOH HOH . 
L 6 HOH A 64 831 831 HOH HOH . 
L 6 HOH A 65 832 832 HOH HOH . 
L 6 HOH A 66 833 833 HOH HOH . 
L 6 HOH A 67 834 834 HOH HOH . 
L 6 HOH A 68 835 835 HOH HOH . 
L 6 HOH A 69 836 836 HOH HOH . 
L 6 HOH A 70 837 837 HOH HOH . 
L 6 HOH A 71 838 838 HOH HOH . 
L 6 HOH A 72 839 839 HOH HOH . 
L 6 HOH A 73 840 840 HOH HOH . 
L 6 HOH A 74 841 841 HOH HOH . 
L 6 HOH A 75 842 842 HOH HOH . 
L 6 HOH A 76 843 843 HOH HOH . 
L 6 HOH A 77 844 844 HOH HOH . 
L 6 HOH A 78 845 845 HOH HOH . 
L 6 HOH A 79 846 846 HOH HOH . 
L 6 HOH A 80 847 847 HOH HOH . 
L 6 HOH A 81 848 848 HOH HOH . 
L 6 HOH A 82 849 849 HOH HOH . 
L 6 HOH A 83 850 850 HOH HOH . 
L 6 HOH A 84 851 851 HOH HOH . 
L 6 HOH A 85 914 914 HOH HOH . 
L 6 HOH A 86 915 915 HOH HOH . 
L 6 HOH A 87 935 935 HOH HOH . 
L 6 HOH A 88 937 937 HOH HOH . 
L 6 HOH A 89 938 938 HOH HOH . 
L 6 HOH A 90 940 940 HOH HOH . 
L 6 HOH A 91 943 943 HOH HOH . 
L 6 HOH A 92 946 946 HOH HOH . 
L 6 HOH A 93 989 989 HOH HOH . 
L 6 HOH A 94 1006 1006 HOH HOH . 
L 6 HOH A 95 1008 1008 HOH HOH . 
L 6 HOH A 96 1015 1015 HOH HOH . 
L 6 HOH A 97 1018 1018 HOH HOH . 
L 6 HOH A 98 1033 1033 HOH HOH . 
L 6 HOH A 99 1080 1080 HOH HOH . 
L 6 HOH A 100 1113 1113 HOH HOH . 
L 6 HOH A 101 1114 1114 HOH HOH . 
L 6 HOH A 102 1116 1116 HOH HOH . 
L 6 HOH A 103 1136 1136 HOH HOH . 
L 6 HOH A 104 1137 1137 HOH HOH . 
L 6 HOH A 105 1138 1138 HOH HOH . 
L 6 HOH A 106 1139 1139 HOH HOH . 
L 6 HOH A 107 1140 1140 HOH HOH . 
L 6 HOH A 108 1141 1141 HOH HOH . 
L 6 HOH A 109 1142 1142 HOH HOH . 
L 6 HOH A 110 1143 1143 HOH HOH . 
L 6 HOH A 111 1144 1144 HOH HOH . 
L 6 HOH A 112 1145 1145 HOH HOH . 
M 6 HOH B 1 763 763 HOH HOH . 
M 6 HOH B 2 764 764 HOH HOH . 
M 6 HOH B 3 765 765 HOH HOH . 
M 6 HOH B 4 766 766 HOH HOH . 
M 6 HOH B 5 767 767 HOH HOH . 
M 6 HOH B 6 768 768 HOH HOH . 
M 6 HOH B 7 769 769 HOH HOH . 
M 6 HOH B 8 770 770 HOH HOH . 
M 6 HOH B 9 771 771 HOH HOH . 
M 6 HOH B 10 772 772 HOH HOH . 
M 6 HOH B 11 773 773 HOH HOH . 
M 6 HOH B 12 774 774 HOH HOH . 
M 6 HOH B 13 775 775 HOH HOH . 
M 6 HOH B 14 776 776 HOH HOH . 
M 6 HOH B 15 777 777 HOH HOH . 
M 6 HOH B 16 778 778 HOH HOH . 
M 6 HOH B 17 780 780 HOH HOH . 
M 6 HOH B 18 781 781 HOH HOH . 
M 6 HOH B 19 782 782 HOH HOH . 
M 6 HOH B 20 783 783 HOH HOH . 
M 6 HOH B 21 784 784 HOH HOH . 
M 6 HOH B 22 785 785 HOH HOH . 
M 6 HOH B 23 786 786 HOH HOH . 
M 6 HOH B 24 787 787 HOH HOH . 
M 6 HOH B 25 788 788 HOH HOH . 
M 6 HOH B 26 789 789 HOH HOH . 
M 6 HOH B 27 790 790 HOH HOH . 
M 6 HOH B 28 791 791 HOH HOH . 
M 6 HOH B 29 793 793 HOH HOH . 
M 6 HOH B 30 794 794 HOH HOH . 
M 6 HOH B 31 795 795 HOH HOH . 
M 6 HOH B 32 796 796 HOH HOH . 
M 6 HOH B 33 797 797 HOH HOH . 
M 6 HOH B 34 798 798 HOH HOH . 
M 6 HOH B 35 799 799 HOH HOH . 
M 6 HOH B 36 800 800 HOH HOH . 
M 6 HOH B 37 801 801 HOH HOH . 
M 6 HOH B 38 802 802 HOH HOH . 
M 6 HOH B 39 803 803 HOH HOH . 
M 6 HOH B 40 804 804 HOH HOH . 
M 6 HOH B 41 805 805 HOH HOH . 
M 6 HOH B 42 806 806 HOH HOH . 
M 6 HOH B 43 807 807 HOH HOH . 
M 6 HOH B 44 808 808 HOH HOH . 
M 6 HOH B 45 810 810 HOH HOH . 
M 6 HOH B 46 811 811 HOH HOH . 
M 6 HOH B 47 812 812 HOH HOH . 
M 6 HOH B 48 813 813 HOH HOH . 
M 6 HOH B 49 815 815 HOH HOH . 
M 6 HOH B 50 816 816 HOH HOH . 
M 6 HOH B 51 817 817 HOH HOH . 
M 6 HOH B 52 818 818 HOH HOH . 
M 6 HOH B 53 819 819 HOH HOH . 
M 6 HOH B 54 820 820 HOH HOH . 
M 6 HOH B 55 821 821 HOH HOH . 
M 6 HOH B 56 822 822 HOH HOH . 
M 6 HOH B 57 823 823 HOH HOH . 
M 6 HOH B 58 852 852 HOH HOH . 
M 6 HOH B 59 853 853 HOH HOH . 
M 6 HOH B 60 854 854 HOH HOH . 
M 6 HOH B 61 855 855 HOH HOH . 
M 6 HOH B 62 856 856 HOH HOH . 
M 6 HOH B 63 857 857 HOH HOH . 
M 6 HOH B 64 858 858 HOH HOH . 
M 6 HOH B 65 859 859 HOH HOH . 
M 6 HOH B 66 860 860 HOH HOH . 
M 6 HOH B 67 861 861 HOH HOH . 
M 6 HOH B 68 862 862 HOH HOH . 
M 6 HOH B 69 863 863 HOH HOH . 
M 6 HOH B 70 864 864 HOH HOH . 
M 6 HOH B 71 865 865 HOH HOH . 
M 6 HOH B 72 866 866 HOH HOH . 
M 6 HOH B 73 867 867 HOH HOH . 
M 6 HOH B 74 869 869 HOH HOH . 
M 6 HOH B 75 870 870 HOH HOH . 
M 6 HOH B 76 871 871 HOH HOH . 
M 6 HOH B 77 872 872 HOH HOH . 
M 6 HOH B 78 873 873 HOH HOH . 
M 6 HOH B 79 874 874 HOH HOH . 
M 6 HOH B 80 875 875 HOH HOH . 
M 6 HOH B 81 876 876 HOH HOH . 
M 6 HOH B 82 877 877 HOH HOH . 
M 6 HOH B 83 878 878 HOH HOH . 
M 6 HOH B 84 879 879 HOH HOH . 
M 6 HOH B 85 880 880 HOH HOH . 
M 6 HOH B 86 881 881 HOH HOH . 
M 6 HOH B 87 882 882 HOH HOH . 
M 6 HOH B 88 896 896 HOH HOH . 
M 6 HOH B 89 900 900 HOH HOH . 
M 6 HOH B 90 922 922 HOH HOH . 
M 6 HOH B 91 926 926 HOH HOH . 
M 6 HOH B 92 942 942 HOH HOH . 
M 6 HOH B 93 955 955 HOH HOH . 
M 6 HOH B 94 957 957 HOH HOH . 
M 6 HOH B 95 968 968 HOH HOH . 
M 6 HOH B 96 969 969 HOH HOH . 
M 6 HOH B 97 971 971 HOH HOH . 
M 6 HOH B 98 972 972 HOH HOH . 
M 6 HOH B 99 973 973 HOH HOH . 
M 6 HOH B 100 975 975 HOH HOH . 
M 6 HOH B 101 977 977 HOH HOH . 
M 6 HOH B 102 979 979 HOH HOH . 
M 6 HOH B 103 980 980 HOH HOH . 
M 6 HOH B 104 981 981 HOH HOH . 
M 6 HOH B 105 983 983 HOH HOH . 
M 6 HOH B 106 985 985 HOH HOH . 
M 6 HOH B 107 986 986 HOH HOH . 
M 6 HOH B 108 1019 1019 HOH HOH . 
M 6 HOH B 109 1021 1021 HOH HOH . 
M 6 HOH B 110 1022 1022 HOH HOH . 
M 6 HOH B 111 1024 1024 HOH HOH . 
M 6 HOH B 112 1050 1050 HOH HOH . 
M 6 HOH B 113 1098 1098 HOH HOH . 
M 6 HOH B 114 1125 1125 HOH HOH . 
M 6 HOH B 115 1126 1126 HOH HOH . 
M 6 HOH B 116 1135 1135 HOH HOH . 
M 6 HOH B 117 1146 1146 HOH HOH . 
M 6 HOH B 118 1147 1147 HOH HOH . 
M 6 HOH B 119 1148 1148 HOH HOH . 
M 6 HOH B 120 1149 1149 HOH HOH . 
M 6 HOH B 121 1150 1150 HOH HOH . 
M 6 HOH B 122 1151 1151 HOH HOH . 
M 6 HOH B 123 1152 1152 HOH HOH . 
N 6 HOH C 1 828 828 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 V V VO4 . . . G 4 7.164 52.484 0.793 1 20.14 ? V VO4 699 A 1 
HETATM 2 O O1 VO4 . . . G 4 5.805 52.255 1.392 1 16.72 ? O1 VO4 699 A 1 
HETATM 3 O O3 VO4 . . . G 4 7.984 53.664 1.237 1 20.78 ? O3 VO4 699 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           3 
#