data_1RFT # _model_server_result.job_id S0VJDnstySxe7rGOWu29XA _model_server_result.datetime_utc '2024-10-16 10:36:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rft # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":403}' # _entry.id 1RFT # _exptl.entry_id 1RFT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1RFT _cell.length_a 103.687 _cell.length_b 103.687 _cell.length_c 58.604 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RFT _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 113 A ASP 113 1_555 C K K . A K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.394 ? metalc ? metalc2 A O THR 148 A THR 148 1_555 C K K . A K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc3 A OG1 THR 186 A THR 186 1_555 C K K . A K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.453 ? metalc ? metalc4 D O2G ACP . A ACP 401 1_555 B ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc5 D O1B ACP . A ACP 401 1_555 B ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc6 D O1B ACP . A ACP 401 1_555 C K K . A K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.919 ? metalc ? metalc7 C K K . A K 404 1_555 F O HOH . A HOH 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.045 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1RFT _atom_sites.fract_transf_matrix[1][1] 0.009644 _atom_sites.fract_transf_matrix[1][2] 0.005568 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011136 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017064 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 403 403 ZN ZN2 . C 3 K A 1 404 404 K K1 . D 4 ACP A 1 401 401 ACP ACP . E 5 PXM A 1 402 402 PXM PYM . F 6 HOH A 1 405 1 HOH WAT . F 6 HOH A 2 406 2 HOH WAT . F 6 HOH A 3 407 3 HOH WAT . F 6 HOH A 4 408 4 HOH WAT . F 6 HOH A 5 409 5 HOH WAT . F 6 HOH A 6 410 6 HOH WAT . F 6 HOH A 7 411 7 HOH WAT . F 6 HOH A 8 412 8 HOH WAT . F 6 HOH A 9 413 9 HOH WAT . F 6 HOH A 10 414 10 HOH WAT . F 6 HOH A 11 415 11 HOH WAT . F 6 HOH A 12 416 12 HOH WAT . F 6 HOH A 13 417 13 HOH WAT . F 6 HOH A 14 418 14 HOH WAT . F 6 HOH A 15 419 15 HOH WAT . F 6 HOH A 16 420 16 HOH WAT . F 6 HOH A 17 421 17 HOH WAT . F 6 HOH A 18 422 18 HOH WAT . F 6 HOH A 19 423 19 HOH WAT . F 6 HOH A 20 424 20 HOH WAT . F 6 HOH A 21 425 21 HOH WAT . F 6 HOH A 22 426 22 HOH WAT . F 6 HOH A 23 427 23 HOH WAT . F 6 HOH A 24 428 24 HOH WAT . F 6 HOH A 25 429 25 HOH WAT . F 6 HOH A 26 430 26 HOH WAT . F 6 HOH A 27 431 27 HOH WAT . F 6 HOH A 28 432 28 HOH WAT . F 6 HOH A 29 433 29 HOH WAT . F 6 HOH A 30 434 30 HOH WAT . F 6 HOH A 31 435 31 HOH WAT . F 6 HOH A 32 436 32 HOH WAT . F 6 HOH A 33 437 33 HOH WAT . F 6 HOH A 34 438 34 HOH WAT . F 6 HOH A 35 439 35 HOH WAT . F 6 HOH A 36 440 36 HOH WAT . F 6 HOH A 37 441 37 HOH WAT . F 6 HOH A 38 442 38 HOH WAT . F 6 HOH A 39 443 39 HOH WAT . F 6 HOH A 40 444 40 HOH WAT . F 6 HOH A 41 445 41 HOH WAT . F 6 HOH A 42 446 42 HOH WAT . F 6 HOH A 43 447 43 HOH WAT . F 6 HOH A 44 448 44 HOH WAT . F 6 HOH A 45 449 45 HOH WAT . F 6 HOH A 46 450 46 HOH WAT . F 6 HOH A 47 451 47 HOH WAT . F 6 HOH A 48 452 48 HOH WAT . F 6 HOH A 49 453 49 HOH WAT . F 6 HOH A 50 454 50 HOH WAT . F 6 HOH A 51 455 51 HOH WAT . F 6 HOH A 52 456 52 HOH WAT . F 6 HOH A 53 457 53 HOH WAT . F 6 HOH A 54 458 54 HOH WAT . F 6 HOH A 55 459 55 HOH WAT . F 6 HOH A 56 460 56 HOH WAT . F 6 HOH A 57 461 57 HOH WAT . F 6 HOH A 58 462 58 HOH WAT . F 6 HOH A 59 463 59 HOH WAT . F 6 HOH A 60 464 60 HOH WAT . F 6 HOH A 61 465 61 HOH WAT . F 6 HOH A 62 466 62 HOH WAT . F 6 HOH A 63 467 63 HOH WAT . F 6 HOH A 64 468 64 HOH WAT . F 6 HOH A 65 469 65 HOH WAT . F 6 HOH A 66 470 66 HOH WAT . F 6 HOH A 67 471 67 HOH WAT . F 6 HOH A 68 472 68 HOH WAT . F 6 HOH A 69 473 69 HOH WAT . F 6 HOH A 70 474 70 HOH WAT . F 6 HOH A 71 475 71 HOH WAT . F 6 HOH A 72 476 72 HOH WAT . F 6 HOH A 73 477 73 HOH WAT . F 6 HOH A 74 478 74 HOH WAT . F 6 HOH A 75 479 75 HOH WAT . F 6 HOH A 76 480 76 HOH WAT . F 6 HOH A 77 481 77 HOH WAT . F 6 HOH A 78 482 78 HOH WAT . F 6 HOH A 79 483 79 HOH WAT . F 6 HOH A 80 484 80 HOH WAT . F 6 HOH A 81 485 81 HOH WAT . F 6 HOH A 82 486 82 HOH WAT . F 6 HOH A 83 487 83 HOH WAT . F 6 HOH A 84 488 84 HOH WAT . F 6 HOH A 85 489 85 HOH WAT . F 6 HOH A 86 490 86 HOH WAT . F 6 HOH A 87 491 87 HOH WAT . F 6 HOH A 88 492 88 HOH WAT . F 6 HOH A 89 493 89 HOH WAT . F 6 HOH A 90 494 90 HOH WAT . F 6 HOH A 91 495 91 HOH WAT . F 6 HOH A 92 496 92 HOH WAT . F 6 HOH A 93 497 93 HOH WAT . F 6 HOH A 94 498 94 HOH WAT . F 6 HOH A 95 499 95 HOH WAT . F 6 HOH A 96 500 96 HOH WAT . F 6 HOH A 97 501 97 HOH WAT . F 6 HOH A 98 502 98 HOH WAT . F 6 HOH A 99 503 99 HOH WAT . F 6 HOH A 100 504 100 HOH WAT . F 6 HOH A 101 505 101 HOH WAT . F 6 HOH A 102 506 102 HOH WAT . F 6 HOH A 103 507 103 HOH WAT . F 6 HOH A 104 508 104 HOH WAT . F 6 HOH A 105 509 105 HOH WAT . F 6 HOH A 106 510 106 HOH WAT . F 6 HOH A 107 511 107 HOH WAT . F 6 HOH A 108 512 108 HOH WAT . F 6 HOH A 109 513 109 HOH WAT . F 6 HOH A 110 514 110 HOH WAT . F 6 HOH A 111 515 111 HOH WAT . F 6 HOH A 112 516 112 HOH WAT . F 6 HOH A 113 517 113 HOH WAT . F 6 HOH A 114 518 114 HOH WAT . F 6 HOH A 115 519 115 HOH WAT . F 6 HOH A 116 520 116 HOH WAT . F 6 HOH A 117 521 117 HOH WAT . F 6 HOH A 118 522 118 HOH WAT . F 6 HOH A 119 523 119 HOH WAT . F 6 HOH A 120 524 120 HOH WAT . F 6 HOH A 121 525 121 HOH WAT . F 6 HOH A 122 526 122 HOH WAT . F 6 HOH A 123 527 123 HOH WAT . F 6 HOH A 124 528 124 HOH WAT . F 6 HOH A 125 529 125 HOH WAT . F 6 HOH A 126 530 126 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 48.379 _atom_site.Cartn_y 46.416 _atom_site.Cartn_z -8.609 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.89 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #