data_1RFX # _model_server_result.job_id jXnSafJbDRZG-NXGJQOnRQ _model_server_result.datetime_utc '2025-04-27 14:59:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rfx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":510}' # _entry.id 1RFX # _exptl.entry_id 1RFX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1RFX _cell.length_a 44.298 _cell.length_b 174.67 _cell.length_c 90.163 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RFX _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA hexameric 6 software_defined_assembly 2 PISA hexameric 6 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z 2 1,2 A,D,E,F,G,H,I,J,K,X 3 3,4 B,C,L,M,N,O,P,Q,R,S,T,U,V,W,Y,Z 3 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 5_545 x+1/2,y-1/2,z 1 0 0 0 1 0 0 0 1 22.149 -87.335 0 4 'crystal symmetry operation' 8_555 x+1/2,-y+1/2,-z 1 0 0 0 -1 0 0 0 -1 22.149 87.335 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 T N N ? 2 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 C SG CYS 6 C CYS 6 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? disulf ? disulf2 A SG CYS 35 A CYS 35 1_555 A SG CYS 88 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf3 A SG CYS 47 A CYS 47 1_555 A SG CYS 87 A CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf4 A SG CYS 56 A CYS 56 1_555 A SG CYS 73 A CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 A SG CYS 58 A CYS 58 1_555 A SG CYS 75 A CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 A SG CYS 62 A CYS 62 1_555 A SG CYS 77 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf7 B SG CYS 6 B CYS 6 1_555 B SG CYS 6 B CYS 6 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? disulf ? disulf8 B SG CYS 35 B CYS 35 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf9 B SG CYS 47 B CYS 47 1_555 B SG CYS 87 B CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf10 B SG CYS 56 B CYS 56 1_555 B SG CYS 73 B CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf11 B SG CYS 58 B CYS 58 1_555 B SG CYS 75 B CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf12 B SG CYS 62 B CYS 62 1_555 B SG CYS 77 B CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? disulf ? disulf13 C SG CYS 35 C CYS 35 1_555 C SG CYS 88 C CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf14 C SG CYS 47 C CYS 47 1_555 C SG CYS 87 C CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf15 C SG CYS 56 C CYS 56 1_555 C SG CYS 73 C CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf16 C SG CYS 58 C CYS 58 1_555 C SG CYS 75 C CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf17 C SG CYS 62 C CYS 62 1_555 C SG CYS 77 C CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1RFX _atom_sites.fract_transf_matrix[1][1] 0.022574 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005725 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011091 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CL A 1 501 501 CL CL . E 2 CL A 1 505 505 CL CL . F 2 CL A 1 507 507 CL CL . G 2 CL A 1 508 508 CL CL . H 2 CL A 1 509 509 CL CL . I 3 ACT A 1 601 601 ACT ACT . J 3 ACT A 1 602 602 ACT ACT . K 3 ACT A 1 607 607 ACT ACT . L 2 CL B 1 502 502 CL CL . M 2 CL B 1 503 503 CL CL . N 2 CL B 1 506 506 CL CL . O 2 CL B 1 511 511 CL CL . P 3 ACT B 1 603 603 ACT ACT . Q 3 ACT B 1 604 604 ACT ACT . R 4 PGE B 1 9181 9181 PGE PGE . S 5 PEG B 1 9180 9180 PEG PEG . T 2 CL C 1 504 504 CL CL . U 2 CL C 1 510 510 CL CL . V 3 ACT C 1 605 605 ACT ACT . W 3 ACT C 1 606 606 ACT ACT . X 6 HOH A 1 608 3 HOH HOH . X 6 HOH A 2 609 10 HOH HOH . X 6 HOH A 3 610 11 HOH HOH . X 6 HOH A 4 611 14 HOH HOH . X 6 HOH A 5 612 15 HOH HOH . X 6 HOH A 6 613 20 HOH HOH . X 6 HOH A 7 614 21 HOH HOH . X 6 HOH A 8 615 24 HOH HOH . X 6 HOH A 9 616 25 HOH HOH . X 6 HOH A 10 617 26 HOH HOH . X 6 HOH A 11 618 30 HOH HOH . X 6 HOH A 12 619 33 HOH HOH . X 6 HOH A 13 620 34 HOH HOH . X 6 HOH A 14 621 36 HOH HOH . X 6 HOH A 15 622 37 HOH HOH . X 6 HOH A 16 623 43 HOH HOH . X 6 HOH A 17 624 47 HOH HOH . X 6 HOH A 18 625 50 HOH HOH . X 6 HOH A 19 626 51 HOH HOH . X 6 HOH A 20 627 52 HOH HOH . X 6 HOH A 21 628 53 HOH HOH . X 6 HOH A 22 629 54 HOH HOH . X 6 HOH A 23 630 55 HOH HOH . X 6 HOH A 24 631 65 HOH HOH . X 6 HOH A 25 632 69 HOH HOH . X 6 HOH A 26 633 71 HOH HOH . X 6 HOH A 27 634 72 HOH HOH . X 6 HOH A 28 635 75 HOH HOH . X 6 HOH A 29 636 78 HOH HOH . X 6 HOH A 30 637 89 HOH HOH . X 6 HOH A 31 638 92 HOH HOH . X 6 HOH A 32 639 93 HOH HOH . X 6 HOH A 33 640 94 HOH HOH . X 6 HOH A 34 641 95 HOH HOH . X 6 HOH A 35 642 96 HOH HOH . X 6 HOH A 36 643 99 HOH HOH . X 6 HOH A 37 644 104 HOH HOH . X 6 HOH A 38 645 107 HOH HOH . X 6 HOH A 39 646 108 HOH HOH . X 6 HOH A 40 647 109 HOH HOH . X 6 HOH A 41 648 120 HOH HOH . X 6 HOH A 42 649 123 HOH HOH . X 6 HOH A 43 650 124 HOH HOH . X 6 HOH A 44 651 126 HOH HOH . X 6 HOH A 45 652 133 HOH HOH . X 6 HOH A 46 653 134 HOH HOH . X 6 HOH A 47 654 139 HOH HOH . X 6 HOH A 48 655 142 HOH HOH . X 6 HOH A 49 656 143 HOH HOH . X 6 HOH A 50 657 144 HOH HOH . X 6 HOH A 51 658 145 HOH HOH . X 6 HOH A 52 659 146 HOH HOH . X 6 HOH A 53 660 147 HOH HOH . X 6 HOH A 54 661 148 HOH HOH . X 6 HOH A 55 662 151 HOH HOH . X 6 HOH A 56 663 152 HOH HOH . X 6 HOH A 57 664 153 HOH HOH . X 6 HOH A 58 665 155 HOH HOH . X 6 HOH A 59 666 156 HOH HOH . X 6 HOH A 60 667 161 HOH HOH . X 6 HOH A 61 668 162 HOH HOH . X 6 HOH A 62 669 174 HOH HOH . X 6 HOH A 63 670 175 HOH HOH . X 6 HOH A 64 671 179 HOH HOH . X 6 HOH A 65 672 182 HOH HOH . X 6 HOH A 66 673 189 HOH HOH . X 6 HOH A 67 674 190 HOH HOH . X 6 HOH A 68 675 191 HOH HOH . X 6 HOH A 69 676 192 HOH HOH . X 6 HOH A 70 677 198 HOH HOH . X 6 HOH A 71 678 200 HOH HOH . X 6 HOH A 72 679 201 HOH HOH . X 6 HOH A 73 680 204 HOH HOH . Y 6 HOH B 1 9182 1 HOH HOH . Y 6 HOH B 2 9183 5 HOH HOH . Y 6 HOH B 3 9184 6 HOH HOH . Y 6 HOH B 4 9185 7 HOH HOH . Y 6 HOH B 5 9186 9 HOH HOH . Y 6 HOH B 6 9187 18 HOH HOH . Y 6 HOH B 7 9188 22 HOH HOH . Y 6 HOH B 8 9189 23 HOH HOH . Y 6 HOH B 9 9190 27 HOH HOH . Y 6 HOH B 10 9191 28 HOH HOH . Y 6 HOH B 11 9192 32 HOH HOH . Y 6 HOH B 12 9193 38 HOH HOH . Y 6 HOH B 13 9194 39 HOH HOH . Y 6 HOH B 14 9195 40 HOH HOH . Y 6 HOH B 15 9196 41 HOH HOH . Y 6 HOH B 16 9197 42 HOH HOH . Y 6 HOH B 17 9198 46 HOH HOH . Y 6 HOH B 18 9199 49 HOH HOH . Y 6 HOH B 19 9200 57 HOH HOH . Y 6 HOH B 20 9201 59 HOH HOH . Y 6 HOH B 21 9202 60 HOH HOH . Y 6 HOH B 22 9203 62 HOH HOH . Y 6 HOH B 23 9204 64 HOH HOH . Y 6 HOH B 24 9205 68 HOH HOH . Y 6 HOH B 25 9206 70 HOH HOH . Y 6 HOH B 26 9207 77 HOH HOH . Y 6 HOH B 27 9208 81 HOH HOH . Y 6 HOH B 28 9209 85 HOH HOH . Y 6 HOH B 29 9210 86 HOH HOH . Y 6 HOH B 30 9211 90 HOH HOH . Y 6 HOH B 31 9212 91 HOH HOH . Y 6 HOH B 32 9213 97 HOH HOH . Y 6 HOH B 33 9214 98 HOH HOH . Y 6 HOH B 34 9215 100 HOH HOH . Y 6 HOH B 35 9216 101 HOH HOH . Y 6 HOH B 36 9217 110 HOH HOH . Y 6 HOH B 37 9218 111 HOH HOH . Y 6 HOH B 38 9219 114 HOH HOH . Y 6 HOH B 39 9220 115 HOH HOH . Y 6 HOH B 40 9221 121 HOH HOH . Y 6 HOH B 41 9222 122 HOH HOH . Y 6 HOH B 42 9223 128 HOH HOH . Y 6 HOH B 43 9224 129 HOH HOH . Y 6 HOH B 44 9225 137 HOH HOH . Y 6 HOH B 45 9226 138 HOH HOH . Y 6 HOH B 46 9227 140 HOH HOH . Y 6 HOH B 47 9228 141 HOH HOH . Y 6 HOH B 48 9229 157 HOH HOH . Y 6 HOH B 49 9230 158 HOH HOH . Y 6 HOH B 50 9231 160 HOH HOH . Y 6 HOH B 51 9232 164 HOH HOH . Y 6 HOH B 52 9233 169 HOH HOH . Y 6 HOH B 53 9234 170 HOH HOH . Y 6 HOH B 54 9235 172 HOH HOH . Y 6 HOH B 55 9236 178 HOH HOH . Y 6 HOH B 56 9237 180 HOH HOH . Y 6 HOH B 57 9238 181 HOH HOH . Y 6 HOH B 58 9239 183 HOH HOH . Y 6 HOH B 59 9240 193 HOH HOH . Y 6 HOH B 60 9241 194 HOH HOH . Y 6 HOH B 61 9242 195 HOH HOH . Y 6 HOH B 62 9243 203 HOH HOH . Y 6 HOH B 63 9244 205 HOH HOH . Z 6 HOH C 1 607 2 HOH HOH . Z 6 HOH C 2 608 4 HOH HOH . Z 6 HOH C 3 609 8 HOH HOH . Z 6 HOH C 4 610 12 HOH HOH . Z 6 HOH C 5 611 13 HOH HOH . Z 6 HOH C 6 612 16 HOH HOH . Z 6 HOH C 7 613 17 HOH HOH . Z 6 HOH C 8 614 19 HOH HOH . Z 6 HOH C 9 615 29 HOH HOH . Z 6 HOH C 10 616 31 HOH HOH . Z 6 HOH C 11 617 35 HOH HOH . Z 6 HOH C 12 618 44 HOH HOH . Z 6 HOH C 13 619 45 HOH HOH . Z 6 HOH C 14 620 48 HOH HOH . Z 6 HOH C 15 621 56 HOH HOH . Z 6 HOH C 16 622 58 HOH HOH . Z 6 HOH C 17 623 61 HOH HOH . Z 6 HOH C 18 624 63 HOH HOH . Z 6 HOH C 19 625 66 HOH HOH . Z 6 HOH C 20 626 67 HOH HOH . Z 6 HOH C 21 627 73 HOH HOH . Z 6 HOH C 22 628 74 HOH HOH . Z 6 HOH C 23 629 76 HOH HOH . Z 6 HOH C 24 630 79 HOH HOH . Z 6 HOH C 25 631 80 HOH HOH . Z 6 HOH C 26 632 82 HOH HOH . Z 6 HOH C 27 633 83 HOH HOH . Z 6 HOH C 28 634 84 HOH HOH . Z 6 HOH C 29 635 87 HOH HOH . Z 6 HOH C 30 636 88 HOH HOH . Z 6 HOH C 31 637 102 HOH HOH . Z 6 HOH C 32 638 103 HOH HOH . Z 6 HOH C 33 639 105 HOH HOH . Z 6 HOH C 34 640 106 HOH HOH . Z 6 HOH C 35 641 112 HOH HOH . Z 6 HOH C 36 642 113 HOH HOH . Z 6 HOH C 37 643 116 HOH HOH . Z 6 HOH C 38 644 117 HOH HOH . Z 6 HOH C 39 645 118 HOH HOH . Z 6 HOH C 40 646 119 HOH HOH . Z 6 HOH C 41 647 125 HOH HOH . Z 6 HOH C 42 648 127 HOH HOH . Z 6 HOH C 43 649 130 HOH HOH . Z 6 HOH C 44 650 131 HOH HOH . Z 6 HOH C 45 651 132 HOH HOH . Z 6 HOH C 46 652 135 HOH HOH . Z 6 HOH C 47 653 136 HOH HOH . Z 6 HOH C 48 654 149 HOH HOH . Z 6 HOH C 49 655 150 HOH HOH . Z 6 HOH C 50 656 154 HOH HOH . Z 6 HOH C 51 657 159 HOH HOH . Z 6 HOH C 52 658 163 HOH HOH . Z 6 HOH C 53 659 165 HOH HOH . Z 6 HOH C 54 660 166 HOH HOH . Z 6 HOH C 55 661 167 HOH HOH . Z 6 HOH C 56 662 168 HOH HOH . Z 6 HOH C 57 663 171 HOH HOH . Z 6 HOH C 58 664 173 HOH HOH . Z 6 HOH C 59 665 176 HOH HOH . Z 6 HOH C 60 666 177 HOH HOH . Z 6 HOH C 61 667 184 HOH HOH . Z 6 HOH C 62 668 185 HOH HOH . Z 6 HOH C 63 669 186 HOH HOH . Z 6 HOH C 64 670 187 HOH HOH . Z 6 HOH C 65 671 188 HOH HOH . Z 6 HOH C 66 672 196 HOH HOH . Z 6 HOH C 67 673 197 HOH HOH . Z 6 HOH C 68 674 199 HOH HOH . Z 6 HOH C 69 675 202 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id U _atom_site.label_entity_id 2 _atom_site.Cartn_x 9.808 _atom_site.Cartn_y 44.54 _atom_site.Cartn_z 20.017 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 65.62 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 510 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #