data_1RGU # _model_server_result.job_id iyEIrvMwcoR4nGw3f3dDaw _model_server_result.datetime_utc '2024-11-04 23:05:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rgu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":996}' # _entry.id 1RGU # _exptl.entry_id 1RGU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 153.178 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(2S-AMINO-1-HYDROXYETHYL)PHENOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1RGU _cell.length_a 49.716 _cell.length_b 104.557 _cell.length_c 193.18 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RGU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,J,L 1 1 B,D,H,I,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O3' DG 4 D DG 806 1_555 E V VO4 . A VO4 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.75 ? metalc ? metalc2 B O3' DG 4 F DG 806 1_555 H V VO4 . B VO4 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? metalc ? metalc3 C NE2 HIS 140 A HIS 263 1_555 E V VO4 . A VO4 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc4 E V VO4 . A VO4 699 1_555 G O4 OTS . A OTS 995 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc5 D NE2 HIS 140 B HIS 263 1_555 H V VO4 . B VO4 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc6 H V VO4 . B VO4 699 1_555 I O4 OTS . B OTS 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? # _chem_comp.formula 'C8 H11 N O2' _chem_comp.formula_weight 153.178 _chem_comp.id OTS _chem_comp.mon_nstd_flag . _chem_comp.name 4-(2S-AMINO-1-HYDROXYETHYL)PHENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms S-OCTOPAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 OTS doub 351 n y C2 C1 OTS sing 352 n y C2 H2 OTS sing 353 n n C3 C4 OTS sing 354 n y C3 H3 OTS sing 355 n n C4 O4 OTS sing 356 n n C4 C5 OTS doub 357 n y O4 HO4 OTS sing 358 n n C5 C6 OTS sing 359 n y C5 H5 OTS sing 360 n n C6 C1 OTS doub 361 n y C6 H6 OTS sing 362 n n C1 C7 OTS sing 363 n n C7 O7 OTS sing 364 n n C7 C8 OTS sing 365 n n C7 H7 OTS sing 366 n n O7 HO7 OTS sing 367 n n C8 N8 OTS sing 368 n n C8 H81 OTS sing 369 n n C8 H82 OTS sing 370 n n N8 HN81 OTS sing 371 n n N8 HN82 OTS sing 372 n n # _atom_sites.entry_id 1RGU _atom_sites.fract_transf_matrix[1][1] 0.020114 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009564 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005177 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 VO4 A 1 699 699 VO4 VO4 . F 4 SPM A 1 999 999 SPM SPM . G 5 OTS A 1 995 995 OTS OTS . H 3 VO4 B 1 699 699 VO4 VO4 . I 5 OTS B 1 996 996 OTS OTS . J 6 HOH D 1 633 633 HOH HOH . J 6 HOH D 2 675 675 HOH HOH . K 6 HOH F 1 638 638 HOH HOH . K 6 HOH F 2 812 812 HOH HOH . K 6 HOH F 3 1145 1145 HOH HOH . K 6 HOH F 4 1153 1153 HOH HOH . L 6 HOH A 1 616 616 HOH HOH . L 6 HOH A 2 626 626 HOH HOH . L 6 HOH A 3 627 627 HOH HOH . L 6 HOH A 4 629 629 HOH HOH . L 6 HOH A 5 636 636 HOH HOH . L 6 HOH A 6 642 642 HOH HOH . L 6 HOH A 7 647 647 HOH HOH . L 6 HOH A 8 653 653 HOH HOH . L 6 HOH A 9 664 664 HOH HOH . L 6 HOH A 10 667 667 HOH HOH . L 6 HOH A 11 672 672 HOH HOH . L 6 HOH A 12 677 677 HOH HOH . L 6 HOH A 13 678 678 HOH HOH . L 6 HOH A 14 679 679 HOH HOH . L 6 HOH A 15 680 680 HOH HOH . L 6 HOH A 16 681 681 HOH HOH . L 6 HOH A 17 684 684 HOH HOH . L 6 HOH A 18 687 687 HOH HOH . L 6 HOH A 19 688 688 HOH HOH . L 6 HOH A 20 689 689 HOH HOH . L 6 HOH A 21 690 690 HOH HOH . L 6 HOH A 22 691 691 HOH HOH . L 6 HOH A 23 692 692 HOH HOH . L 6 HOH A 24 694 694 HOH HOH . L 6 HOH A 25 700 700 HOH HOH . L 6 HOH A 26 701 701 HOH HOH . L 6 HOH A 27 702 702 HOH HOH . L 6 HOH A 28 706 706 HOH HOH . L 6 HOH A 29 708 708 HOH HOH . L 6 HOH A 30 713 713 HOH HOH . L 6 HOH A 31 720 720 HOH HOH . L 6 HOH A 32 722 722 HOH HOH . L 6 HOH A 33 755 755 HOH HOH . L 6 HOH A 34 758 758 HOH HOH . L 6 HOH A 35 763 763 HOH HOH . L 6 HOH A 36 766 766 HOH HOH . L 6 HOH A 37 768 768 HOH HOH . L 6 HOH A 38 770 770 HOH HOH . L 6 HOH A 39 776 776 HOH HOH . L 6 HOH A 40 781 781 HOH HOH . L 6 HOH A 41 789 789 HOH HOH . L 6 HOH A 42 794 794 HOH HOH . L 6 HOH A 43 803 803 HOH HOH . L 6 HOH A 44 833 833 HOH HOH . L 6 HOH A 45 835 835 HOH HOH . L 6 HOH A 46 852 852 HOH HOH . L 6 HOH A 47 855 855 HOH HOH . L 6 HOH A 48 856 856 HOH HOH . L 6 HOH A 49 857 857 HOH HOH . L 6 HOH A 50 858 858 HOH HOH . L 6 HOH A 51 860 860 HOH HOH . L 6 HOH A 52 861 861 HOH HOH . L 6 HOH A 53 862 862 HOH HOH . L 6 HOH A 54 865 865 HOH HOH . L 6 HOH A 55 866 866 HOH HOH . L 6 HOH A 56 867 867 HOH HOH . L 6 HOH A 57 870 870 HOH HOH . L 6 HOH A 58 873 873 HOH HOH . L 6 HOH A 59 874 874 HOH HOH . L 6 HOH A 60 876 876 HOH HOH . L 6 HOH A 61 901 901 HOH HOH . L 6 HOH A 62 908 908 HOH HOH . L 6 HOH A 63 913 913 HOH HOH . L 6 HOH A 64 930 930 HOH HOH . L 6 HOH A 65 933 933 HOH HOH . L 6 HOH A 66 939 939 HOH HOH . L 6 HOH A 67 941 941 HOH HOH . L 6 HOH A 68 943 943 HOH HOH . L 6 HOH A 69 945 945 HOH HOH . L 6 HOH A 70 949 949 HOH HOH . L 6 HOH A 71 1007 1007 HOH HOH . L 6 HOH A 72 1009 1009 HOH HOH . L 6 HOH A 73 1014 1014 HOH HOH . L 6 HOH A 74 1015 1015 HOH HOH . L 6 HOH A 75 1033 1033 HOH HOH . L 6 HOH A 76 1105 1105 HOH HOH . L 6 HOH A 77 1117 1117 HOH HOH . L 6 HOH A 78 1120 1120 HOH HOH . L 6 HOH A 79 1136 1136 HOH HOH . L 6 HOH A 80 1140 1140 HOH HOH . L 6 HOH A 81 1149 1149 HOH HOH . L 6 HOH A 82 1151 1151 HOH HOH . M 6 HOH B 1 613 613 HOH HOH . M 6 HOH B 2 614 614 HOH HOH . M 6 HOH B 3 615 615 HOH HOH . M 6 HOH B 4 617 617 HOH HOH . M 6 HOH B 5 618 618 HOH HOH . M 6 HOH B 6 622 622 HOH HOH . M 6 HOH B 7 624 624 HOH HOH . M 6 HOH B 8 625 625 HOH HOH . M 6 HOH B 9 628 628 HOH HOH . M 6 HOH B 10 631 631 HOH HOH . M 6 HOH B 11 632 632 HOH HOH . M 6 HOH B 12 634 634 HOH HOH . M 6 HOH B 13 635 635 HOH HOH . M 6 HOH B 14 640 640 HOH HOH . M 6 HOH B 15 641 641 HOH HOH . M 6 HOH B 16 643 643 HOH HOH . M 6 HOH B 17 645 645 HOH HOH . M 6 HOH B 18 648 648 HOH HOH . M 6 HOH B 19 649 649 HOH HOH . M 6 HOH B 20 651 651 HOH HOH . M 6 HOH B 21 652 652 HOH HOH . M 6 HOH B 22 654 654 HOH HOH . M 6 HOH B 23 661 661 HOH HOH . M 6 HOH B 24 663 663 HOH HOH . M 6 HOH B 25 668 668 HOH HOH . M 6 HOH B 26 669 669 HOH HOH . M 6 HOH B 27 673 673 HOH HOH . M 6 HOH B 28 674 674 HOH HOH . M 6 HOH B 29 676 676 HOH HOH . M 6 HOH B 30 682 682 HOH HOH . M 6 HOH B 31 686 686 HOH HOH . M 6 HOH B 32 693 693 HOH HOH . M 6 HOH B 33 695 695 HOH HOH . M 6 HOH B 34 703 703 HOH HOH . M 6 HOH B 35 726 726 HOH HOH . M 6 HOH B 36 730 730 HOH HOH . M 6 HOH B 37 731 731 HOH HOH . M 6 HOH B 38 735 735 HOH HOH . M 6 HOH B 39 737 737 HOH HOH . M 6 HOH B 40 739 739 HOH HOH . M 6 HOH B 41 745 745 HOH HOH . M 6 HOH B 42 746 746 HOH HOH . M 6 HOH B 43 749 749 HOH HOH . M 6 HOH B 44 752 752 HOH HOH . M 6 HOH B 45 753 753 HOH HOH . M 6 HOH B 46 756 756 HOH HOH . M 6 HOH B 47 765 765 HOH HOH . M 6 HOH B 48 798 798 HOH HOH . M 6 HOH B 49 819 819 HOH HOH . M 6 HOH B 50 836 836 HOH HOH . M 6 HOH B 51 851 851 HOH HOH . M 6 HOH B 52 864 864 HOH HOH . M 6 HOH B 53 880 880 HOH HOH . M 6 HOH B 54 881 881 HOH HOH . M 6 HOH B 55 882 882 HOH HOH . M 6 HOH B 56 883 883 HOH HOH . M 6 HOH B 57 886 886 HOH HOH . M 6 HOH B 58 887 887 HOH HOH . M 6 HOH B 59 888 888 HOH HOH . M 6 HOH B 60 889 889 HOH HOH . M 6 HOH B 61 890 890 HOH HOH . M 6 HOH B 62 892 892 HOH HOH . M 6 HOH B 63 893 893 HOH HOH . M 6 HOH B 64 895 895 HOH HOH . M 6 HOH B 65 897 897 HOH HOH . M 6 HOH B 66 898 898 HOH HOH . M 6 HOH B 67 899 899 HOH HOH . M 6 HOH B 68 900 900 HOH HOH . M 6 HOH B 69 902 902 HOH HOH . M 6 HOH B 70 923 923 HOH HOH . M 6 HOH B 71 926 926 HOH HOH . M 6 HOH B 72 954 954 HOH HOH . M 6 HOH B 73 958 958 HOH HOH . M 6 HOH B 74 959 959 HOH HOH . M 6 HOH B 75 961 961 HOH HOH . M 6 HOH B 76 966 966 HOH HOH . M 6 HOH B 77 967 967 HOH HOH . M 6 HOH B 78 968 968 HOH HOH . M 6 HOH B 79 969 969 HOH HOH . M 6 HOH B 80 970 970 HOH HOH . M 6 HOH B 81 972 972 HOH HOH . M 6 HOH B 82 974 974 HOH HOH . M 6 HOH B 83 982 982 HOH HOH . M 6 HOH B 84 983 983 HOH HOH . M 6 HOH B 85 984 984 HOH HOH . M 6 HOH B 86 985 985 HOH HOH . M 6 HOH B 87 1004 1004 HOH HOH . M 6 HOH B 88 1029 1029 HOH HOH . M 6 HOH B 89 1054 1054 HOH HOH . M 6 HOH B 90 1071 1071 HOH HOH . M 6 HOH B 91 1098 1098 HOH HOH . M 6 HOH B 92 1126 1126 HOH HOH . M 6 HOH B 93 1135 1135 HOH HOH . M 6 HOH B 94 1137 1137 HOH HOH . M 6 HOH B 95 1147 1147 HOH HOH . M 6 HOH B 96 1152 1152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 OTS . . . I 5 6.468 38.823 65.732 1 31.48 ? C2 OTS 996 B 1 HETATM 2 C C3 OTS . . . I 5 7.005 39.171 64.492 1 30.73 ? C3 OTS 996 B 1 HETATM 3 C C4 OTS . . . I 5 8.303 38.801 64.157 1 28.37 ? C4 OTS 996 B 1 HETATM 4 O O4 OTS . . . I 5 8.815 39.149 62.952 1 28.82 ? O4 OTS 996 B 1 HETATM 5 C C5 OTS . . . I 5 9.077 38.084 65.066 1 27.39 ? C5 OTS 996 B 1 HETATM 6 C C6 OTS . . . I 5 8.538 37.732 66.295 1 30.01 ? C6 OTS 996 B 1 HETATM 7 C C1 OTS . . . I 5 7.235 38.097 66.638 1 34.02 ? C1 OTS 996 B 1 HETATM 8 C C7 OTS . . . I 5 6.654 37.707 68.015 1 38.69 ? C7 OTS 996 B 1 HETATM 9 O O7 OTS . . . I 5 5.934 36.477 67.946 1 45.33 ? O7 OTS 996 B 1 HETATM 10 C C8 OTS . . . I 5 5.687 38.781 68.485 1 41.81 ? C8 OTS 996 B 1 HETATM 11 N N8 OTS . . . I 5 6.459 39.784 69.24 1 43.69 ? N8 OTS 996 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #