data_1RHO # _model_server_result.job_id r-2-oSHSyI90WMh9fRsMHw _model_server_result.datetime_utc '2024-12-23 07:02:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rho # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":909}' # _entry.id 1RHO # _exptl.entry_id 1RHO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1RHO _cell.length_a 156.57 _cell.length_b 156.57 _cell.length_c 132.59 _cell.Z_PDB 54 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RHO _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA dimeric 2 software_defined_assembly 4 PISA dimeric 2 software_defined_assembly 5 PISA hexameric 6 software_defined_assembly 6 PISA hexameric 6 software_defined_assembly 7 PISA dimeric 2 software_defined_assembly 8 PISA dimeric 2 software_defined_assembly 9 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,M 1 1 B,G,H,I,N 2 1 C,J,K,L,O 3 1 A,C,D,E,F,J,K,L,M,O 4 1 B,G,H,I,N 5 1,2 A,C,D,E,F,J,K,L,M,O 6 1,3,4 B,G,H,I,N 7 1,5,6,7,8,2 B,G,H,I,N 8 1,7 A,D,E,F,M 9 1 C,J,K,L,O 9 4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 -x+2/3,-x+y+1/3,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 78.285 45.197866 44.196667 3 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 5 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 78.285 135.593597 0 6 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -78.285 135.593597 0 7 'crystal symmetry operation' 10_455 y-1/3,x+1/3,-z+1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 -78.285 45.197866 44.196667 8 'crystal symmetry operation' 11_565 x-y+2/3,-y+4/3,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 180.791463 44.196667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 67 A GLY 125 1_555 A N MSE 68 A MSE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale2 A C MSE 68 A MSE 126 1_555 A N LYS 69 A LYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C TYR 86 A TYR 144 1_555 A N MSE 87 A MSE 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C MSE 87 A MSE 145 1_555 A N VAL 88 A VAL 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale5 A C GLY 110 A GLY 168 1_555 A N MSE 111 A MSE 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale6 A C MSE 111 A MSE 169 1_555 A N LEU 112 A LEU 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale7 B C GLY 67 B GLY 125 1_555 B N MSE 68 B MSE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale8 B C MSE 68 B MSE 126 1_555 B N LYS 69 B LYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale9 B C TYR 86 B TYR 144 1_555 B N MSE 87 B MSE 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale10 B C MSE 87 B MSE 145 1_555 B N VAL 88 B VAL 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale11 B C GLY 110 B GLY 168 1_555 B N MSE 111 B MSE 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale12 B C MSE 111 B MSE 169 1_555 B N LEU 112 B LEU 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 C C GLY 67 C GLY 125 1_555 C N MSE 68 C MSE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale14 C C MSE 68 C MSE 126 1_555 C N LYS 69 C LYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale15 C C TYR 86 C TYR 144 1_555 C N MSE 87 C MSE 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale16 C C MSE 87 C MSE 145 1_555 C N VAL 88 C VAL 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale17 C C GLY 110 C GLY 168 1_555 C N MSE 111 C MSE 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale18 C C MSE 111 C MSE 169 1_555 C N LEU 112 C LEU 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 309 n n S O2 SO4 doub 310 n n S O3 SO4 sing 311 n n S O4 SO4 sing 312 n n # _atom_sites.entry_id 1RHO _atom_sites.fract_transf_matrix[1][1] 0.006387 _atom_sites.fract_transf_matrix[1][2] 0.003687 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007375 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007542 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 902 902 SO4 SO4 . E 2 SO4 A 1 904 904 SO4 SO4 . F 2 SO4 A 1 907 907 SO4 SO4 . G 2 SO4 B 1 903 903 SO4 SO4 . H 2 SO4 B 1 906 906 SO4 SO4 . I 2 SO4 B 1 909 909 SO4 SO4 . J 2 SO4 C 1 901 901 SO4 SO4 . K 2 SO4 C 1 905 905 SO4 SO4 . L 2 SO4 C 1 908 908 SO4 SO4 . M 3 HOH A 1 501 501 HOH HOH . M 3 HOH A 2 502 502 HOH HOH . M 3 HOH A 3 505 505 HOH HOH . M 3 HOH A 4 507 507 HOH HOH . M 3 HOH A 5 515 515 HOH HOH . M 3 HOH A 6 516 516 HOH HOH . M 3 HOH A 7 517 517 HOH HOH . M 3 HOH A 8 518 518 HOH HOH . M 3 HOH A 9 519 519 HOH HOH . M 3 HOH A 10 520 520 HOH HOH . M 3 HOH A 11 522 522 HOH HOH . M 3 HOH A 12 524 524 HOH HOH . M 3 HOH A 13 525 525 HOH HOH . M 3 HOH A 14 526 526 HOH HOH . M 3 HOH A 15 527 527 HOH HOH . M 3 HOH A 16 531 531 HOH HOH . M 3 HOH A 17 541 541 HOH HOH . M 3 HOH A 18 553 553 HOH HOH . M 3 HOH A 19 570 570 HOH HOH . M 3 HOH A 20 590 590 HOH HOH . M 3 HOH A 21 591 591 HOH HOH . M 3 HOH A 22 592 592 HOH HOH . M 3 HOH A 23 593 593 HOH HOH . M 3 HOH A 24 594 594 HOH HOH . M 3 HOH A 25 598 598 HOH HOH . M 3 HOH A 26 599 599 HOH HOH . M 3 HOH A 27 601 601 HOH HOH . M 3 HOH A 28 602 602 HOH HOH . M 3 HOH A 29 603 603 HOH HOH . M 3 HOH A 30 606 606 HOH HOH . M 3 HOH A 31 608 608 HOH HOH . M 3 HOH A 32 611 611 HOH HOH . M 3 HOH A 33 613 613 HOH HOH . M 3 HOH A 34 614 614 HOH HOH . M 3 HOH A 35 616 616 HOH HOH . M 3 HOH A 36 619 619 HOH HOH . M 3 HOH A 37 620 620 HOH HOH . M 3 HOH A 38 627 627 HOH HOH . M 3 HOH A 39 628 628 HOH HOH . M 3 HOH A 40 632 632 HOH HOH . M 3 HOH A 41 633 633 HOH HOH . M 3 HOH A 42 638 638 HOH HOH . M 3 HOH A 43 640 640 HOH HOH . M 3 HOH A 44 643 643 HOH HOH . M 3 HOH A 45 650 650 HOH HOH . M 3 HOH A 46 652 652 HOH HOH . M 3 HOH A 47 653 653 HOH HOH . M 3 HOH A 48 654 654 HOH HOH . M 3 HOH A 49 663 663 HOH HOH . M 3 HOH A 50 664 664 HOH HOH . M 3 HOH A 51 665 665 HOH HOH . M 3 HOH A 52 668 668 HOH HOH . M 3 HOH A 53 671 671 HOH HOH . M 3 HOH A 54 675 675 HOH HOH . M 3 HOH A 55 681 681 HOH HOH . M 3 HOH A 56 684 684 HOH HOH . M 3 HOH A 57 688 688 HOH HOH . M 3 HOH A 58 691 691 HOH HOH . N 3 HOH B 1 503 503 HOH HOH . N 3 HOH B 2 504 504 HOH HOH . N 3 HOH B 3 534 534 HOH HOH . N 3 HOH B 4 535 535 HOH HOH . N 3 HOH B 5 539 539 HOH HOH . N 3 HOH B 6 540 540 HOH HOH . N 3 HOH B 7 543 543 HOH HOH . N 3 HOH B 8 544 544 HOH HOH . N 3 HOH B 9 545 545 HOH HOH . N 3 HOH B 10 546 546 HOH HOH . N 3 HOH B 11 547 547 HOH HOH . N 3 HOH B 12 548 548 HOH HOH . N 3 HOH B 13 550 550 HOH HOH . N 3 HOH B 14 551 551 HOH HOH . N 3 HOH B 15 552 552 HOH HOH . N 3 HOH B 16 554 554 HOH HOH . N 3 HOH B 17 555 555 HOH HOH . N 3 HOH B 18 556 556 HOH HOH . N 3 HOH B 19 557 557 HOH HOH . N 3 HOH B 20 558 558 HOH HOH . N 3 HOH B 21 559 559 HOH HOH . N 3 HOH B 22 560 560 HOH HOH . N 3 HOH B 23 561 561 HOH HOH . N 3 HOH B 24 562 562 HOH HOH . N 3 HOH B 25 565 565 HOH HOH . N 3 HOH B 26 566 566 HOH HOH . N 3 HOH B 27 567 567 HOH HOH . N 3 HOH B 28 569 569 HOH HOH . N 3 HOH B 29 589 589 HOH HOH . N 3 HOH B 30 595 595 HOH HOH . N 3 HOH B 31 597 597 HOH HOH . N 3 HOH B 32 600 600 HOH HOH . N 3 HOH B 33 617 617 HOH HOH . N 3 HOH B 34 621 621 HOH HOH . N 3 HOH B 35 622 622 HOH HOH . N 3 HOH B 36 629 629 HOH HOH . N 3 HOH B 37 630 630 HOH HOH . N 3 HOH B 38 631 631 HOH HOH . N 3 HOH B 39 634 634 HOH HOH . N 3 HOH B 40 635 635 HOH HOH . N 3 HOH B 41 636 636 HOH HOH . N 3 HOH B 42 637 637 HOH HOH . N 3 HOH B 43 642 642 HOH HOH . N 3 HOH B 44 644 644 HOH HOH . N 3 HOH B 45 645 645 HOH HOH . N 3 HOH B 46 648 648 HOH HOH . N 3 HOH B 47 649 649 HOH HOH . N 3 HOH B 48 651 651 HOH HOH . N 3 HOH B 49 655 655 HOH HOH . N 3 HOH B 50 656 656 HOH HOH . N 3 HOH B 51 657 657 HOH HOH . N 3 HOH B 52 660 660 HOH HOH . N 3 HOH B 53 662 662 HOH HOH . N 3 HOH B 54 669 669 HOH HOH . N 3 HOH B 55 670 670 HOH HOH . N 3 HOH B 56 673 673 HOH HOH . N 3 HOH B 57 674 674 HOH HOH . N 3 HOH B 58 676 676 HOH HOH . N 3 HOH B 59 677 677 HOH HOH . N 3 HOH B 60 678 678 HOH HOH . N 3 HOH B 61 679 679 HOH HOH . N 3 HOH B 62 680 680 HOH HOH . N 3 HOH B 63 683 683 HOH HOH . N 3 HOH B 64 687 687 HOH HOH . N 3 HOH B 65 689 689 HOH HOH . O 3 HOH C 1 506 506 HOH HOH . O 3 HOH C 2 508 508 HOH HOH . O 3 HOH C 3 509 509 HOH HOH . O 3 HOH C 4 510 510 HOH HOH . O 3 HOH C 5 511 511 HOH HOH . O 3 HOH C 6 512 512 HOH HOH . O 3 HOH C 7 513 513 HOH HOH . O 3 HOH C 8 514 514 HOH HOH . O 3 HOH C 9 521 521 HOH HOH . O 3 HOH C 10 523 523 HOH HOH . O 3 HOH C 11 528 528 HOH HOH . O 3 HOH C 12 529 529 HOH HOH . O 3 HOH C 13 530 530 HOH HOH . O 3 HOH C 14 532 532 HOH HOH . O 3 HOH C 15 533 533 HOH HOH . O 3 HOH C 16 536 536 HOH HOH . O 3 HOH C 17 537 537 HOH HOH . O 3 HOH C 18 538 538 HOH HOH . O 3 HOH C 19 542 542 HOH HOH . O 3 HOH C 20 549 549 HOH HOH . O 3 HOH C 21 563 563 HOH HOH . O 3 HOH C 22 564 564 HOH HOH . O 3 HOH C 23 568 568 HOH HOH . O 3 HOH C 24 571 571 HOH HOH . O 3 HOH C 25 572 572 HOH HOH . O 3 HOH C 26 573 573 HOH HOH . O 3 HOH C 27 574 574 HOH HOH . O 3 HOH C 28 575 575 HOH HOH . O 3 HOH C 29 576 576 HOH HOH . O 3 HOH C 30 577 577 HOH HOH . O 3 HOH C 31 578 578 HOH HOH . O 3 HOH C 32 579 579 HOH HOH . O 3 HOH C 33 580 580 HOH HOH . O 3 HOH C 34 581 581 HOH HOH . O 3 HOH C 35 582 582 HOH HOH . O 3 HOH C 36 583 583 HOH HOH . O 3 HOH C 37 584 584 HOH HOH . O 3 HOH C 38 585 585 HOH HOH . O 3 HOH C 39 586 586 HOH HOH . O 3 HOH C 40 587 587 HOH HOH . O 3 HOH C 41 588 588 HOH HOH . O 3 HOH C 42 596 596 HOH HOH . O 3 HOH C 43 604 604 HOH HOH . O 3 HOH C 44 605 605 HOH HOH . O 3 HOH C 45 607 607 HOH HOH . O 3 HOH C 46 609 609 HOH HOH . O 3 HOH C 47 610 610 HOH HOH . O 3 HOH C 48 612 612 HOH HOH . O 3 HOH C 49 615 615 HOH HOH . O 3 HOH C 50 618 618 HOH HOH . O 3 HOH C 51 623 623 HOH HOH . O 3 HOH C 52 624 624 HOH HOH . O 3 HOH C 53 625 625 HOH HOH . O 3 HOH C 54 626 626 HOH HOH . O 3 HOH C 55 639 639 HOH HOH . O 3 HOH C 56 641 641 HOH HOH . O 3 HOH C 57 646 646 HOH HOH . O 3 HOH C 58 647 647 HOH HOH . O 3 HOH C 59 658 658 HOH HOH . O 3 HOH C 60 659 659 HOH HOH . O 3 HOH C 61 661 661 HOH HOH . O 3 HOH C 62 666 666 HOH HOH . O 3 HOH C 63 667 667 HOH HOH . O 3 HOH C 64 672 672 HOH HOH . O 3 HOH C 65 682 682 HOH HOH . O 3 HOH C 66 685 685 HOH HOH . O 3 HOH C 67 686 686 HOH HOH . O 3 HOH C 68 690 690 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . I 2 -11.632 63.124 30.529 1 65.85 ? S SO4 909 B 1 HETATM 2 O O1 SO4 . . . I 2 -11.638 63.081 29.072 1 65.46 ? O1 SO4 909 B 1 HETATM 3 O O2 SO4 . . . I 2 -12.163 61.801 31.076 1 70.44 ? O2 SO4 909 B 1 HETATM 4 O O3 SO4 . . . I 2 -10.208 63.295 31.136 1 68.79 ? O3 SO4 909 B 1 HETATM 5 O O4 SO4 . . . I 2 -12.454 64.321 30.992 1 64.8 ? O4 SO4 909 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 427 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 5 #