data_1RI1
#
_model_server_result.job_id            i9ftN0BwFZ-culrU4Kyyqg 
_model_server_result.datetime_utc      '2024-10-16 10:24:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ri1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":299}' 
#
_entry.id    1RI1 
#
_exptl.entry_id    1RI1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              384.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-ADENOSYL-L-HOMOCYSTEINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1RI1 
_cell.length_a            63.644 
_cell.length_b            63.644 
_cell.length_c            112.443 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1RI1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C14 H20 N6 O5 S' 
_chem_comp.formula_weight    384.411 
_chem_comp.id                SAH 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              S-ADENOSYL-L-HOMOCYSTEINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SAH sing 364 n n 
N HN1 SAH sing 365 n n 
N HN2 SAH sing 366 n n 
CA CB SAH sing 367 n n 
CA C SAH sing 368 n n 
CA HA SAH sing 369 n n 
CB CG SAH sing 370 n n 
CB HB1 SAH sing 371 n n 
CB HB2 SAH sing 372 n n 
CG SD SAH sing 373 n n 
CG HG1 SAH sing 374 n n 
CG HG2 SAH sing 375 n n 
SD C5' SAH sing 376 n n 
C O SAH doub 377 n n 
C OXT SAH sing 378 n n 
OXT HXT SAH sing 379 n n 
C5' C4' SAH sing 380 n n 
C5' "H5'1" SAH sing 381 n n 
C5' "H5'2" SAH sing 382 n n 
C4' O4' SAH sing 383 n n 
C4' C3' SAH sing 384 n n 
C4' H4' SAH sing 385 n n 
O4' C1' SAH sing 386 n n 
C3' O3' SAH sing 387 n n 
C3' C2' SAH sing 388 n n 
C3' H3' SAH sing 389 n n 
O3' HO3' SAH sing 390 n n 
C2' O2' SAH sing 391 n n 
C2' C1' SAH sing 392 n n 
C2' H2' SAH sing 393 n n 
O2' HO2' SAH sing 394 n n 
C1' N9 SAH sing 395 n n 
C1' H1' SAH sing 396 n n 
N9 C8 SAH sing 397 n y 
N9 C4 SAH sing 398 n y 
C8 N7 SAH doub 399 n y 
C8 H8 SAH sing 400 n n 
N7 C5 SAH sing 401 n y 
C5 C6 SAH sing 402 n y 
C5 C4 SAH doub 403 n y 
C6 N6 SAH sing 404 n n 
C6 N1 SAH doub 405 n y 
N6 HN61 SAH sing 406 n n 
N6 HN62 SAH sing 407 n n 
N1 C2 SAH sing 408 n y 
C2 N3 SAH doub 409 n y 
C2 H2 SAH sing 410 n n 
N3 C4 SAH sing 411 n y 
#
_atom_sites.entry_id                     1RI1 
_atom_sites.fract_transf_matrix[1][1]    0.015712 
_atom_sites.fract_transf_matrix[1][2]    0.009072 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018143 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008893 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SAH A 1 299 1 SAH SAH . 
C 3 GTG A 1 300 1 GTG GTG . 
D 4 HOH A 1 301 1 HOH WAT . 
D 4 HOH A 2 302 2 HOH WAT . 
D 4 HOH A 3 303 3 HOH WAT . 
D 4 HOH A 4 304 4 HOH WAT . 
D 4 HOH A 5 305 5 HOH WAT . 
D 4 HOH A 6 306 6 HOH WAT . 
D 4 HOH A 7 307 7 HOH WAT . 
D 4 HOH A 8 308 8 HOH WAT . 
D 4 HOH A 9 309 9 HOH WAT . 
D 4 HOH A 10 310 10 HOH WAT . 
D 4 HOH A 11 311 11 HOH WAT . 
D 4 HOH A 12 312 12 HOH WAT . 
D 4 HOH A 13 313 13 HOH WAT . 
D 4 HOH A 14 314 14 HOH WAT . 
D 4 HOH A 15 315 15 HOH WAT . 
D 4 HOH A 16 316 16 HOH WAT . 
D 4 HOH A 17 317 17 HOH WAT . 
D 4 HOH A 18 318 18 HOH WAT . 
D 4 HOH A 19 319 19 HOH WAT . 
D 4 HOH A 20 320 20 HOH WAT . 
D 4 HOH A 21 321 21 HOH WAT . 
D 4 HOH A 22 322 22 HOH WAT . 
D 4 HOH A 23 323 23 HOH WAT . 
D 4 HOH A 24 324 24 HOH WAT . 
D 4 HOH A 25 325 25 HOH WAT . 
D 4 HOH A 26 326 26 HOH WAT . 
D 4 HOH A 27 327 27 HOH WAT . 
D 4 HOH A 28 328 28 HOH WAT . 
D 4 HOH A 29 329 29 HOH WAT . 
D 4 HOH A 30 330 30 HOH WAT . 
D 4 HOH A 31 331 31 HOH WAT . 
D 4 HOH A 32 332 32 HOH WAT . 
D 4 HOH A 33 333 33 HOH WAT . 
D 4 HOH A 34 334 34 HOH WAT . 
D 4 HOH A 35 335 35 HOH WAT . 
D 4 HOH A 36 336 36 HOH WAT . 
D 4 HOH A 37 337 37 HOH WAT . 
D 4 HOH A 38 338 38 HOH WAT . 
D 4 HOH A 39 339 39 HOH WAT . 
D 4 HOH A 40 340 40 HOH WAT . 
D 4 HOH A 41 341 41 HOH WAT . 
D 4 HOH A 42 342 42 HOH WAT . 
D 4 HOH A 43 343 43 HOH WAT . 
D 4 HOH A 44 344 44 HOH WAT . 
D 4 HOH A 45 345 45 HOH WAT . 
D 4 HOH A 46 346 46 HOH WAT . 
D 4 HOH A 47 347 47 HOH WAT . 
D 4 HOH A 48 348 48 HOH WAT . 
D 4 HOH A 49 349 49 HOH WAT . 
D 4 HOH A 50 350 50 HOH WAT . 
D 4 HOH A 51 351 51 HOH WAT . 
D 4 HOH A 52 352 52 HOH WAT . 
D 4 HOH A 53 353 53 HOH WAT . 
D 4 HOH A 54 354 54 HOH WAT . 
D 4 HOH A 55 355 55 HOH WAT . 
D 4 HOH A 56 356 56 HOH WAT . 
D 4 HOH A 57 357 57 HOH WAT . 
D 4 HOH A 58 358 58 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SAH . . . B 2 13.242 30.633 91.617 1 36.75 ? N SAH 299 A 1 
HETATM 2 C CA SAH . . . B 2 14.284 31.354 92.47 1 37.04 ? CA SAH 299 A 1 
HETATM 3 C CB SAH . . . B 2 15.613 31.63 91.873 1 37.14 ? CB SAH 299 A 1 
HETATM 4 C CG SAH . . . B 2 16.422 30.508 91.324 1 37.23 ? CG SAH 299 A 1 
HETATM 5 S SD SAH . . . B 2 17.741 31.258 90.286 1 33.04 ? SD SAH 299 A 1 
HETATM 6 C C SAH . . . B 2 13.691 32.735 92.933 1 37.11 ? C SAH 299 A 1 
HETATM 7 O O SAH . . . B 2 12.549 33.066 92.575 1 37.53 ? O SAH 299 A 1 
HETATM 8 O OXT SAH . . . B 2 14.478 33.45 93.675 1 36.82 ? OXT SAH 299 A 1 
HETATM 9 C C5' SAH . . . B 2 17.99 30.006 89.102 1 36.26 ? C5' SAH 299 A 1 
HETATM 10 C C4' SAH . . . B 2 18.171 28.591 89.818 1 36.58 ? C4' SAH 299 A 1 
HETATM 11 O O4' SAH . . . B 2 18.341 27.704 88.731 1 38.11 ? O4' SAH 299 A 1 
HETATM 12 C C3' SAH . . . B 2 19.416 28.388 90.664 1 37.29 ? C3' SAH 299 A 1 
HETATM 13 O O3' SAH . . . B 2 19.056 28.188 92.035 1 36.22 ? O3' SAH 299 A 1 
HETATM 14 C C2' SAH . . . B 2 20.082 27.133 89.963 1 38.09 ? C2' SAH 299 A 1 
HETATM 15 O O2' SAH . . . B 2 20.766 26.291 90.869 1 38.24 ? O2' SAH 299 A 1 
HETATM 16 C C1' SAH . . . B 2 18.89 26.48 89.29 1 37.65 ? C1' SAH 299 A 1 
HETATM 17 N N9 SAH . . . B 2 19.167 25.602 88.324 1 37.66 ? N9 SAH 299 A 1 
HETATM 18 C C8 SAH . . . B 2 19.959 25.63 87.189 1 38 ? C8 SAH 299 A 1 
HETATM 19 N N7 SAH . . . B 2 19.954 24.537 86.493 1 39.02 ? N7 SAH 299 A 1 
HETATM 20 C C5 SAH . . . B 2 19.081 23.666 87.202 1 38.08 ? C5 SAH 299 A 1 
HETATM 21 C C6 SAH . . . B 2 18.661 22.305 86.947 1 37.94 ? C6 SAH 299 A 1 
HETATM 22 N N6 SAH . . . B 2 19.063 21.569 85.895 1 37.32 ? N6 SAH 299 A 1 
HETATM 23 N N1 SAH . . . B 2 17.785 21.797 87.88 1 37.69 ? N1 SAH 299 A 1 
HETATM 24 C C2 SAH . . . B 2 17.349 22.495 88.965 1 37.64 ? C2 SAH 299 A 1 
HETATM 25 N N3 SAH . . . B 2 17.729 23.787 89.237 1 37.47 ? N3 SAH 299 A 1 
HETATM 26 C C4 SAH . . . B 2 18.593 24.303 88.321 1 37.6 ? C4 SAH 299 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           26 
#