data_1RI1
#
_model_server_result.job_id            AHJfzRmJCa3vJa8hdeBNjw 
_model_server_result.datetime_utc      '2024-10-16 10:34:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ri1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":300}' 
#
_entry.id    1RI1 
#
_exptl.entry_id    1RI1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              803.44 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1RI1 
_cell.length_a            63.644 
_cell.length_b            63.644 
_cell.length_c            112.443 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1RI1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H30 N10 O18 P3 1' 
_chem_comp.formula_weight    803.44 
_chem_comp.id                GTG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'MRNA CAP ANALOG N7-METHYL GPPPG' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A GTG doub 129 n n 
PA O2A GTG sing 130 n n 
PA O3A GTG sing 131 n n 
PA O5D GTG sing 132 n n 
O2A HOA2 GTG sing 133 n n 
O3A PB GTG sing 134 n n 
PB O1B GTG doub 135 n n 
PB O2B GTG sing 136 n n 
PB O3B GTG sing 137 n n 
O2B HOB2 GTG sing 138 n n 
O3B PG GTG sing 139 n n 
N9A C8A GTG sing 140 n y 
N9A C4A GTG sing 141 n y 
N9A C1D GTG sing 142 n n 
C8A N7A GTG doub 143 n y 
C8A H8 GTG sing 144 n n 
N7A C7X GTG sing 145 n n 
N7A C5A GTG sing 146 n y 
C7X HC71 GTG sing 147 n n 
C7X HC72 GTG sing 148 n n 
C7X HC73 GTG sing 149 n n 
C5A C6A GTG sing 150 n n 
C5A C4A GTG doub 151 n y 
C6A O6A GTG doub 152 n n 
C6A N1A GTG sing 153 n n 
N1A C2A GTG sing 154 n n 
N1A HN1 GTG sing 155 n n 
C2A N2A GTG sing 156 n n 
C2A N3A GTG doub 157 n n 
N2A HN21 GTG sing 158 n n 
N2A HN22 GTG sing 159 n n 
N3A C4A GTG sing 160 n n 
O5D C5D GTG sing 161 n n 
C5D C4D GTG sing 162 n n 
C5D "H5'1" GTG sing 163 n n 
C5D "H5'2" GTG sing 164 n n 
C4D O4D GTG sing 165 n n 
C4D C3D GTG sing 166 n n 
C4D H4' GTG sing 167 n n 
O4D C1D GTG sing 168 n n 
C3D O3D GTG sing 169 n n 
C3D C2D GTG sing 170 n n 
C3D H3' GTG sing 171 n n 
O3D HO3' GTG sing 172 n n 
C2D O2D GTG sing 173 n n 
C2D C1D GTG sing 174 n n 
C2D H2' GTG sing 175 n n 
O2D HO2' GTG sing 176 n n 
C1D H1' GTG sing 177 n n 
PG O1G GTG doub 178 n n 
PG O2G GTG sing 179 n n 
PG O5E GTG sing 180 n n 
O2G HOG2 GTG sing 181 n n 
O5E C5E GTG sing 182 n n 
C5E C4E GTG sing 183 n n 
C5E H5B1 GTG sing 184 n n 
C5E H5B2 GTG sing 185 n n 
C4E O4E GTG sing 186 n n 
C4E C3E GTG sing 187 n n 
C4E H4B GTG sing 188 n n 
O4E C1E GTG sing 189 n n 
C3E O3E GTG sing 190 n n 
C3E C2E GTG sing 191 n n 
C3E H3B GTG sing 192 n n 
O3E H3BO GTG sing 193 n n 
C2E O2E GTG sing 194 n n 
C2E C1E GTG sing 195 n n 
C2E H2B GTG sing 196 n n 
O2E H2BO GTG sing 197 n n 
C1E N9B GTG sing 198 n n 
C1E H1B GTG sing 199 n n 
N9B C8B GTG sing 200 n y 
N9B C4B GTG sing 201 n y 
C8B N7B GTG doub 202 n y 
C8B H8B GTG sing 203 n n 
N7B C5B GTG sing 204 n y 
C5B C6B GTG sing 205 n n 
C5B C4B GTG doub 206 n y 
C6B O6B GTG doub 207 n n 
C6B N1B GTG sing 208 n n 
N1B C2B GTG sing 209 n n 
N1B H1BN GTG sing 210 n n 
C2B N2B GTG sing 211 n n 
C2B N3B GTG doub 212 n n 
N2B H2B1 GTG sing 213 n n 
N2B H2B2 GTG sing 214 n n 
N3B C4B GTG sing 215 n n 
#
_atom_sites.entry_id                     1RI1 
_atom_sites.fract_transf_matrix[1][1]    0.015712 
_atom_sites.fract_transf_matrix[1][2]    0.009072 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018143 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008893 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SAH A 1 299 1 SAH SAH . 
C 3 GTG A 1 300 1 GTG GTG . 
D 4 HOH A 1 301 1 HOH WAT . 
D 4 HOH A 2 302 2 HOH WAT . 
D 4 HOH A 3 303 3 HOH WAT . 
D 4 HOH A 4 304 4 HOH WAT . 
D 4 HOH A 5 305 5 HOH WAT . 
D 4 HOH A 6 306 6 HOH WAT . 
D 4 HOH A 7 307 7 HOH WAT . 
D 4 HOH A 8 308 8 HOH WAT . 
D 4 HOH A 9 309 9 HOH WAT . 
D 4 HOH A 10 310 10 HOH WAT . 
D 4 HOH A 11 311 11 HOH WAT . 
D 4 HOH A 12 312 12 HOH WAT . 
D 4 HOH A 13 313 13 HOH WAT . 
D 4 HOH A 14 314 14 HOH WAT . 
D 4 HOH A 15 315 15 HOH WAT . 
D 4 HOH A 16 316 16 HOH WAT . 
D 4 HOH A 17 317 17 HOH WAT . 
D 4 HOH A 18 318 18 HOH WAT . 
D 4 HOH A 19 319 19 HOH WAT . 
D 4 HOH A 20 320 20 HOH WAT . 
D 4 HOH A 21 321 21 HOH WAT . 
D 4 HOH A 22 322 22 HOH WAT . 
D 4 HOH A 23 323 23 HOH WAT . 
D 4 HOH A 24 324 24 HOH WAT . 
D 4 HOH A 25 325 25 HOH WAT . 
D 4 HOH A 26 326 26 HOH WAT . 
D 4 HOH A 27 327 27 HOH WAT . 
D 4 HOH A 28 328 28 HOH WAT . 
D 4 HOH A 29 329 29 HOH WAT . 
D 4 HOH A 30 330 30 HOH WAT . 
D 4 HOH A 31 331 31 HOH WAT . 
D 4 HOH A 32 332 32 HOH WAT . 
D 4 HOH A 33 333 33 HOH WAT . 
D 4 HOH A 34 334 34 HOH WAT . 
D 4 HOH A 35 335 35 HOH WAT . 
D 4 HOH A 36 336 36 HOH WAT . 
D 4 HOH A 37 337 37 HOH WAT . 
D 4 HOH A 38 338 38 HOH WAT . 
D 4 HOH A 39 339 39 HOH WAT . 
D 4 HOH A 40 340 40 HOH WAT . 
D 4 HOH A 41 341 41 HOH WAT . 
D 4 HOH A 42 342 42 HOH WAT . 
D 4 HOH A 43 343 43 HOH WAT . 
D 4 HOH A 44 344 44 HOH WAT . 
D 4 HOH A 45 345 45 HOH WAT . 
D 4 HOH A 46 346 46 HOH WAT . 
D 4 HOH A 47 347 47 HOH WAT . 
D 4 HOH A 48 348 48 HOH WAT . 
D 4 HOH A 49 349 49 HOH WAT . 
D 4 HOH A 50 350 50 HOH WAT . 
D 4 HOH A 51 351 51 HOH WAT . 
D 4 HOH A 52 352 52 HOH WAT . 
D 4 HOH A 53 353 53 HOH WAT . 
D 4 HOH A 54 354 54 HOH WAT . 
D 4 HOH A 55 355 55 HOH WAT . 
D 4 HOH A 56 356 56 HOH WAT . 
D 4 HOH A 57 357 57 HOH WAT . 
D 4 HOH A 58 358 58 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA GTG . . . C 3 15.442 36.718 98.527 1 116.47 ? PA GTG 300 A 1 
HETATM 2 O O1A GTG . . . C 3 15.637 35.376 97.896 1 116.37 ? O1A GTG 300 A 1 
HETATM 3 O O2A GTG . . . C 3 16.172 36.918 99.818 1 116.41 ? O2A GTG 300 A 1 
HETATM 4 O O3A GTG . . . C 3 13.833 36.902 98.793 1 117.47 ? O3A GTG 300 A 1 
HETATM 5 P PB GTG . . . C 3 12.874 37.075 100.075 1 118.79 ? PB GTG 300 A 1 
HETATM 6 O O1B GTG . . . C 3 12.8 35.778 100.787 1 118.43 ? O1B GTG 300 A 1 
HETATM 7 O O2B GTG . . . C 3 13.363 38.172 100.953 1 118.57 ? O2B GTG 300 A 1 
HETATM 8 O O3B GTG . . . C 3 11.41 37.442 99.466 1 119.16 ? O3B GTG 300 A 1 
HETATM 9 N N9A GTG . . . C 3 16.102 36.858 92.101 1 109.08 ? N9A GTG 300 A 1 
HETATM 10 C C8A GTG . . . C 3 16.814 35.742 92.547 1 108.6 ? C8A GTG 300 A 1 
HETATM 11 N N7A GTG . . . C 3 17.62 35.239 91.656 1 108 ? N7A GTG 300 A 1 
HETATM 12 C C5A GTG . . . C 3 17.462 36.056 90.548 1 107.49 ? C5A GTG 300 A 1 
HETATM 13 C C6A GTG . . . C 3 18.099 36.011 89.259 1 106.91 ? C6A GTG 300 A 1 
HETATM 14 O O6A GTG . . . C 3 18.929 35.201 88.827 1 106.23 ? O6A GTG 300 A 1 
HETATM 15 N N1A GTG . . . C 3 17.641 37.035 88.394 1 106.69 ? N1A GTG 300 A 1 
HETATM 16 C C2A GTG . . . C 3 16.688 37.994 88.747 1 106.88 ? C2A GTG 300 A 1 
HETATM 17 N N2A GTG . . . C 3 16.406 38.897 87.803 1 106.32 ? N2A GTG 300 A 1 
HETATM 18 N N3A GTG . . . C 3 16.111 38.067 89.957 1 107.41 ? N3A GTG 300 A 1 
HETATM 19 C C4A GTG . . . C 3 16.507 37.043 90.796 1 108.06 ? C4A GTG 300 A 1 
HETATM 20 O O5D GTG . . . C 3 15.737 37.917 97.514 1 115.2 ? O5D GTG 300 A 1 
HETATM 21 C C5D GTG . . . C 3 16.354 37.739 96.23 1 113.32 ? C5D GTG 300 A 1 
HETATM 22 C C4D GTG . . . C 3 15.299 37.929 95.164 1 112.16 ? C4D GTG 300 A 1 
HETATM 23 O O4D GTG . . . C 3 15.911 38.228 93.868 1 111.51 ? O4D GTG 300 A 1 
HETATM 24 C C3D GTG . . . C 3 14.399 36.692 94.923 1 111.64 ? C3D GTG 300 A 1 
HETATM 25 O O3D GTG . . . C 3 13.269 36.64 95.815 1 111.47 ? O3D GTG 300 A 1 
HETATM 26 C C2D GTG . . . C 3 14.039 36.811 93.453 1 111.12 ? C2D GTG 300 A 1 
HETATM 27 O O2D GTG . . . C 3 12.814 37.554 93.311 1 111.15 ? O2D GTG 300 A 1 
HETATM 28 C C1D GTG . . . C 3 15.174 37.585 92.805 1 110.45 ? C1D GTG 300 A 1 
HETATM 29 P PG GTG . . . C 3 10.007 37.603 100.257 1 119.87 ? PG GTG 300 A 1 
HETATM 30 O O1G GTG . . . C 3 9.735 36.297 100.963 1 119.54 ? O1G GTG 300 A 1 
HETATM 31 O O2G GTG . . . C 3 10.142 38.775 101.205 1 119.55 ? O2G GTG 300 A 1 
HETATM 32 O O5E GTG . . . C 3 8.88 37.886 99.254 1 119.4 ? O5E GTG 300 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           32 
#