data_1RIW
#
_model_server_result.job_id            swmdRNc9WhMcd9EX_S_3Zg 
_model_server_result.datetime_utc      '2024-12-27 01:12:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1riw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":701}' 
#
_entry.id    1RIW 
#
_exptl.entry_id    1RIW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.19 
_cell.angle_gamma         90 
_cell.entry_id            1RIW 
_cell.length_a            71.055 
_cell.length_b            72.366 
_cell.length_c            70.83 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1RIW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 F N N 
? 6 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 9 A CYS 9 1_555 B SG CYS 119 B CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf2 B SG CYS 28 B CYS 64 1_555 B SG CYS 44 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf3 C SG CYS 19 C CYS 203 1_555 C SG CYS 33 C CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
disulf ? disulf4 C SG CYS 47 C CYS 231 1_555 C SG CYS 77 C CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 B ND2 ASN 53 B ASN 89 1_555 E C1 NAG . B NAG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
covale ? covale2 D C TYS 9 D TYS 363 1_555 D N LEU 10 D LEU 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
metalc ? metalc1 C O LYS 20 C LYS 204 1_555 F NA NA . C NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc2 C O THR 23 C THR 207 1_555 F NA NA . C NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc3 C O PHE 61 C PHE 245 4_546 F NA NA . C NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? 
metalc ? metalc4 C O ARG 79 C ARG 263 1_555 G NA NA . C NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
metalc ? metalc5 C O LYS 82 C LYS 266 1_555 G NA NA . C NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
metalc ? metalc6 F NA NA . C NA 701 1_555 K O HOH . C HOH 1027 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? 
metalc ? metalc7 F NA NA . C NA 701 1_555 K O HOH . C HOH 1035 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.053 ? 
metalc ? metalc8 G NA NA . C NA 702 1_555 K O HOH . C HOH 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc9 G NA NA . C NA 702 1_555 K O HOH . C HOH 1012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? 
metalc ? metalc10 G NA NA . C NA 702 1_555 K O HOH . C HOH 1016 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? 
metalc ? metalc11 G NA NA . C NA 702 1_555 K O HOH . C HOH 1022 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1RIW 
_atom_sites.fract_transf_matrix[1][1]    0.014074 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00253 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013819 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014345 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 NAG B 1 500 500 NAG NAG . 
F 6 NA C 1 701 701 NA NA . 
G 6 NA C 1 702 702 NA NA . 
H 7 OSC C 1 1001 1001 OSC OSC . 
I 8 HOH A 1 37 37 HOH HOH . 
I 8 HOH A 2 38 38 HOH HOH . 
I 8 HOH A 3 39 39 HOH HOH . 
I 8 HOH A 4 40 40 HOH HOH . 
I 8 HOH A 5 41 41 HOH HOH . 
I 8 HOH A 6 42 42 HOH HOH . 
I 8 HOH A 7 43 43 HOH HOH . 
I 8 HOH A 8 44 44 HOH HOH . 
I 8 HOH A 9 45 45 HOH HOH . 
I 8 HOH A 10 46 46 HOH HOH . 
I 8 HOH A 11 47 47 HOH HOH . 
I 8 HOH A 12 48 48 HOH HOH . 
I 8 HOH A 13 49 49 HOH HOH . 
I 8 HOH A 14 50 50 HOH HOH . 
I 8 HOH A 15 51 51 HOH HOH . 
I 8 HOH A 16 52 52 HOH HOH . 
I 8 HOH A 17 53 53 HOH HOH . 
I 8 HOH A 18 54 54 HOH HOH . 
I 8 HOH A 19 55 55 HOH HOH . 
I 8 HOH A 20 596 596 HOH HOH . 
J 8 HOH B 1 501 501 HOH HOH . 
J 8 HOH B 2 502 502 HOH HOH . 
J 8 HOH B 3 503 503 HOH HOH . 
J 8 HOH B 4 504 504 HOH HOH . 
J 8 HOH B 5 505 505 HOH HOH . 
J 8 HOH B 6 506 506 HOH HOH . 
J 8 HOH B 7 507 507 HOH HOH . 
J 8 HOH B 8 508 508 HOH HOH . 
J 8 HOH B 9 509 509 HOH HOH . 
J 8 HOH B 10 510 510 HOH HOH . 
J 8 HOH B 11 511 511 HOH HOH . 
J 8 HOH B 12 512 512 HOH HOH . 
J 8 HOH B 13 513 513 HOH HOH . 
J 8 HOH B 14 514 514 HOH HOH . 
J 8 HOH B 15 515 515 HOH HOH . 
J 8 HOH B 16 516 516 HOH HOH . 
J 8 HOH B 17 517 517 HOH HOH . 
J 8 HOH B 18 518 518 HOH HOH . 
J 8 HOH B 19 519 519 HOH HOH . 
J 8 HOH B 20 520 520 HOH HOH . 
J 8 HOH B 21 521 521 HOH HOH . 
J 8 HOH B 22 522 522 HOH HOH . 
J 8 HOH B 23 523 523 HOH HOH . 
J 8 HOH B 24 524 524 HOH HOH . 
J 8 HOH B 25 525 525 HOH HOH . 
J 8 HOH B 26 526 526 HOH HOH . 
J 8 HOH B 27 527 527 HOH HOH . 
J 8 HOH B 28 528 528 HOH HOH . 
J 8 HOH B 29 529 529 HOH HOH . 
J 8 HOH B 30 530 530 HOH HOH . 
J 8 HOH B 31 531 531 HOH HOH . 
J 8 HOH B 32 532 532 HOH HOH . 
J 8 HOH B 33 533 533 HOH HOH . 
J 8 HOH B 34 534 534 HOH HOH . 
J 8 HOH B 35 535 535 HOH HOH . 
J 8 HOH B 36 536 536 HOH HOH . 
J 8 HOH B 37 537 537 HOH HOH . 
J 8 HOH B 38 538 538 HOH HOH . 
J 8 HOH B 39 539 539 HOH HOH . 
J 8 HOH B 40 540 540 HOH HOH . 
J 8 HOH B 41 541 541 HOH HOH . 
J 8 HOH B 42 542 542 HOH HOH . 
J 8 HOH B 43 543 543 HOH HOH . 
J 8 HOH B 44 544 544 HOH HOH . 
J 8 HOH B 45 545 545 HOH HOH . 
J 8 HOH B 46 546 546 HOH HOH . 
J 8 HOH B 47 547 547 HOH HOH . 
J 8 HOH B 48 548 548 HOH HOH . 
J 8 HOH B 49 549 549 HOH HOH . 
J 8 HOH B 50 550 550 HOH HOH . 
J 8 HOH B 51 551 551 HOH HOH . 
J 8 HOH B 52 552 552 HOH HOH . 
J 8 HOH B 53 553 553 HOH HOH . 
J 8 HOH B 54 554 554 HOH HOH . 
J 8 HOH B 55 555 555 HOH HOH . 
J 8 HOH B 56 556 556 HOH HOH . 
J 8 HOH B 57 557 557 HOH HOH . 
J 8 HOH B 58 558 558 HOH HOH . 
J 8 HOH B 59 559 559 HOH HOH . 
J 8 HOH B 60 560 560 HOH HOH . 
J 8 HOH B 61 561 561 HOH HOH . 
J 8 HOH B 62 562 562 HOH HOH . 
J 8 HOH B 63 563 563 HOH HOH . 
J 8 HOH B 64 564 564 HOH HOH . 
J 8 HOH B 65 565 565 HOH HOH . 
J 8 HOH B 66 566 566 HOH HOH . 
J 8 HOH B 67 567 567 HOH HOH . 
J 8 HOH B 68 568 568 HOH HOH . 
J 8 HOH B 69 569 569 HOH HOH . 
J 8 HOH B 70 570 570 HOH HOH . 
J 8 HOH B 71 571 571 HOH HOH . 
J 8 HOH B 72 572 572 HOH HOH . 
J 8 HOH B 73 573 573 HOH HOH . 
J 8 HOH B 74 574 574 HOH HOH . 
J 8 HOH B 75 575 575 HOH HOH . 
J 8 HOH B 76 576 576 HOH HOH . 
J 8 HOH B 77 577 577 HOH HOH . 
J 8 HOH B 78 578 578 HOH HOH . 
J 8 HOH B 79 579 579 HOH HOH . 
J 8 HOH B 80 580 580 HOH HOH . 
J 8 HOH B 81 581 581 HOH HOH . 
J 8 HOH B 82 582 582 HOH HOH . 
J 8 HOH B 83 583 583 HOH HOH . 
J 8 HOH B 84 584 584 HOH HOH . 
J 8 HOH B 85 585 585 HOH HOH . 
J 8 HOH B 86 586 586 HOH HOH . 
J 8 HOH B 87 587 587 HOH HOH . 
J 8 HOH B 88 588 588 HOH HOH . 
J 8 HOH B 89 589 589 HOH HOH . 
J 8 HOH B 90 590 590 HOH HOH . 
J 8 HOH B 91 591 591 HOH HOH . 
J 8 HOH B 92 592 592 HOH HOH . 
J 8 HOH B 93 593 593 HOH HOH . 
J 8 HOH B 94 594 594 HOH HOH . 
J 8 HOH B 95 595 595 HOH HOH . 
J 8 HOH B 96 597 597 HOH HOH . 
J 8 HOH B 97 598 598 HOH HOH . 
J 8 HOH B 98 599 599 HOH HOH . 
J 8 HOH B 99 600 600 HOH HOH . 
J 8 HOH B 100 601 601 HOH HOH . 
J 8 HOH B 101 602 602 HOH HOH . 
J 8 HOH B 102 603 603 HOH HOH . 
J 8 HOH B 103 604 604 HOH HOH . 
J 8 HOH B 104 605 605 HOH HOH . 
J 8 HOH B 105 606 606 HOH HOH . 
J 8 HOH B 106 607 607 HOH HOH . 
J 8 HOH B 107 608 608 HOH HOH . 
J 8 HOH B 108 609 609 HOH HOH . 
J 8 HOH B 109 610 610 HOH HOH . 
K 8 HOH C 1 1002 1002 HOH HOH . 
K 8 HOH C 2 1003 1003 HOH HOH . 
K 8 HOH C 3 1004 1004 HOH HOH . 
K 8 HOH C 4 1005 1005 HOH HOH . 
K 8 HOH C 5 1006 1006 HOH HOH . 
K 8 HOH C 6 1007 1007 HOH HOH . 
K 8 HOH C 7 1008 1008 HOH HOH . 
K 8 HOH C 8 1009 1009 HOH HOH . 
K 8 HOH C 9 1010 1010 HOH HOH . 
K 8 HOH C 10 1011 1011 HOH HOH . 
K 8 HOH C 11 1012 1012 HOH HOH . 
K 8 HOH C 12 1013 1013 HOH HOH . 
K 8 HOH C 13 1014 1014 HOH HOH . 
K 8 HOH C 14 1015 1015 HOH HOH . 
K 8 HOH C 15 1016 1016 HOH HOH . 
K 8 HOH C 16 1017 1017 HOH HOH . 
K 8 HOH C 17 1018 1018 HOH HOH . 
K 8 HOH C 18 1019 1019 HOH HOH . 
K 8 HOH C 19 1020 1020 HOH HOH . 
K 8 HOH C 20 1021 1021 HOH HOH . 
K 8 HOH C 21 1022 1022 HOH HOH . 
K 8 HOH C 22 1023 1023 HOH HOH . 
K 8 HOH C 23 1024 1024 HOH HOH . 
K 8 HOH C 24 1025 1025 HOH HOH . 
K 8 HOH C 25 1026 1026 HOH HOH . 
K 8 HOH C 26 1027 1027 HOH HOH . 
K 8 HOH C 27 1028 1028 HOH HOH . 
K 8 HOH C 28 1029 1029 HOH HOH . 
K 8 HOH C 29 1030 1030 HOH HOH . 
K 8 HOH C 30 1031 1031 HOH HOH . 
K 8 HOH C 31 1032 1032 HOH HOH . 
K 8 HOH C 32 1033 1033 HOH HOH . 
K 8 HOH C 33 1034 1034 HOH HOH . 
K 8 HOH C 34 1035 1035 HOH HOH . 
K 8 HOH C 35 1036 1036 HOH HOH . 
K 8 HOH C 36 1037 1037 HOH HOH . 
K 8 HOH C 37 1038 1038 HOH HOH . 
K 8 HOH C 38 1039 1039 HOH HOH . 
K 8 HOH C 39 1040 1040 HOH HOH . 
K 8 HOH C 40 1041 1041 HOH HOH . 
K 8 HOH C 41 1042 1042 HOH HOH . 
K 8 HOH C 42 1043 1043 HOH HOH . 
K 8 HOH C 43 1044 1044 HOH HOH . 
K 8 HOH C 44 1045 1045 HOH HOH . 
K 8 HOH C 45 1046 1046 HOH HOH . 
K 8 HOH C 46 1047 1047 HOH HOH . 
K 8 HOH C 47 1048 1048 HOH HOH . 
K 8 HOH C 48 1049 1049 HOH HOH . 
K 8 HOH C 49 1050 1050 HOH HOH . 
K 8 HOH C 50 1051 1051 HOH HOH . 
K 8 HOH C 51 1052 1052 HOH HOH . 
K 8 HOH C 52 1053 1053 HOH HOH . 
K 8 HOH C 53 1054 1054 HOH HOH . 
K 8 HOH C 54 1055 1055 HOH HOH . 
K 8 HOH C 55 1056 1056 HOH HOH . 
K 8 HOH C 56 1057 1057 HOH HOH . 
K 8 HOH C 57 1058 1058 HOH HOH . 
K 8 HOH C 58 1059 1059 HOH HOH . 
K 8 HOH C 59 1060 1060 HOH HOH . 
K 8 HOH C 60 1061 1061 HOH HOH . 
K 8 HOH C 61 1062 1062 HOH HOH . 
K 8 HOH C 62 1063 1063 HOH HOH . 
K 8 HOH C 63 1064 1064 HOH HOH . 
K 8 HOH C 64 1065 1065 HOH HOH . 
K 8 HOH C 65 1066 1066 HOH HOH . 
K 8 HOH C 66 1067 1067 HOH HOH . 
K 8 HOH C 67 1068 1068 HOH HOH . 
K 8 HOH C 68 1069 1069 HOH HOH . 
K 8 HOH C 69 1070 1070 HOH HOH . 
K 8 HOH C 70 1071 1071 HOH HOH . 
K 8 HOH C 71 1072 1072 HOH HOH . 
K 8 HOH C 72 1073 1073 HOH HOH . 
K 8 HOH C 73 1074 1074 HOH HOH . 
K 8 HOH C 74 1075 1075 HOH HOH . 
K 8 HOH C 75 1076 1076 HOH HOH . 
K 8 HOH C 76 1077 1077 HOH HOH . 
K 8 HOH C 77 1078 1078 HOH HOH . 
K 8 HOH C 78 1079 1079 HOH HOH . 
K 8 HOH C 79 1080 1080 HOH HOH . 
K 8 HOH C 80 1081 1081 HOH HOH . 
K 8 HOH C 81 1082 1082 HOH HOH . 
L 8 HOH D 1 82 82 HOH HOH . 
L 8 HOH D 2 95 95 HOH HOH . 
L 8 HOH D 3 153 153 HOH HOH . 
L 8 HOH D 4 204 204 HOH HOH . 
L 8 HOH D 5 248 248 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       6 
_atom_site.Cartn_x               18.751 
_atom_site.Cartn_y               -15.263 
_atom_site.Cartn_z               37.767 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        25.28 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           701 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#