data_1RJ6 # _model_server_result.job_id VJmrrh1lKiohPGE4I-HNKQ _model_server_result.datetime_utc '2024-11-23 04:21:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rj6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 1RJ6 # _exptl.entry_id 1RJ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 222.245 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.2 _cell.angle_gamma 90 _cell.entry_id 1RJ6 _cell.length_a 59.2 _cell.length_b 75.8 _cell.length_c 73.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RJ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,I 1 1 B,D,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 H N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 3 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing 4 ? 3 4 3 MAN BMA C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C NAG 1 C 1 NAG D 801 NAG 2 n C NAG 2 C 2 NAG D 802 NAG 3 n D NAG 1 D 1 NAG C 901 NAG 3 n D NAG 2 D 2 NAG C 902 NAG 3 n D BMA 3 D 3 BMA C 903 BMA 3 n D MAN 4 D 4 MAN C 904 BMA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 204 A CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 23 B CYS 23 1_555 B SG CYS 204 B CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? covale ? covale1 A ND2 ASN 196 A ASN 195 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale2 B ND2 ASN 196 B ASN 195 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale3 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.396 ? covale ? covale4 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.391 ? covale ? covale5 D O4 NAG . D NAG 2 1_555 D C1 BMA . D BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.394 ? covale ? covale6 D O6 BMA . D BMA 3 1_555 D C1 MAN . D MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.409 ? metalc ? metalc1 A NE2 HIS 92 A HIS 94 1_555 E ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc2 A NE2 HIS 94 A HIS 96 1_555 E ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc3 A ND1 HIS 118 A HIS 119 1_555 E ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc4 F N1 AZM . A AZM 400 1_555 E ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc5 B NE2 HIS 92 B HIS 94 1_555 G ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc6 B NE2 HIS 94 B HIS 96 1_555 G ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc7 B ND1 HIS 118 B HIS 119 1_555 G ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc8 H N1 AZM . B AZM 401 1_555 G ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? # _chem_comp.formula 'C4 H6 N4 O3 S2' _chem_comp.formula_weight 222.245 _chem_comp.id AZM _chem_comp.mon_nstd_flag . _chem_comp.name 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N3 AZM doub 70 n y C1 S1 AZM sing 71 n n C1 S2 AZM sing 72 n y C2 N2 AZM doub 73 n y C2 N4 AZM sing 74 n n C2 S2 AZM sing 75 n y C3 C4 AZM sing 76 n n C3 N4 AZM sing 77 n n C3 O3 AZM doub 78 n n C4 H41 AZM sing 79 n n C4 H42 AZM sing 80 n n C4 H43 AZM sing 81 n n N1 S1 AZM sing 82 n n N1 HN11 AZM sing 83 n n N1 HN12 AZM sing 84 n n N2 N3 AZM sing 85 n y N4 HN4 AZM sing 86 n n O1 S1 AZM doub 87 n n O2 S1 AZM doub 88 n n # _atom_sites.entry_id 1RJ6 _atom_sites.fract_transf_matrix[1][1] 0.016905 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002737 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013201 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013725 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ZN A 1 601 601 ZN ZN . F 5 AZM A 1 400 400 AZM AZM . G 4 ZN B 1 601 602 ZN ZN . H 5 AZM B 1 401 401 AZM AZM . I 6 HOH A 1 803 1 HOH HOH . I 6 HOH A 2 804 9 HOH HOH . I 6 HOH A 3 805 10 HOH HOH . I 6 HOH A 4 806 11 HOH HOH . I 6 HOH A 5 807 12 HOH HOH . I 6 HOH A 6 808 13 HOH HOH . I 6 HOH A 7 809 14 HOH HOH . I 6 HOH A 8 810 15 HOH HOH . I 6 HOH A 9 811 16 HOH HOH . I 6 HOH A 10 812 17 HOH HOH . I 6 HOH A 11 813 18 HOH HOH . I 6 HOH A 12 814 19 HOH HOH . I 6 HOH A 13 815 20 HOH HOH . I 6 HOH A 14 816 21 HOH HOH . I 6 HOH A 15 817 30 HOH HOH . J 6 HOH B 1 905 2 HOH HOH . J 6 HOH B 2 906 3 HOH HOH . J 6 HOH B 3 907 4 HOH HOH . J 6 HOH B 4 908 5 HOH HOH . J 6 HOH B 5 909 6 HOH HOH . J 6 HOH B 6 910 7 HOH HOH . J 6 HOH B 7 911 8 HOH HOH . J 6 HOH B 8 912 22 HOH HOH . J 6 HOH B 9 913 23 HOH HOH . J 6 HOH B 10 914 24 HOH HOH . J 6 HOH B 11 915 25 HOH HOH . J 6 HOH B 12 916 26 HOH HOH . J 6 HOH B 13 917 27 HOH HOH . J 6 HOH B 14 918 28 HOH HOH . J 6 HOH B 15 919 29 HOH HOH . J 6 HOH B 16 920 31 HOH HOH . J 6 HOH B 17 921 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 AZM . . . H 5 10.993 16.518 -20.763 1 103.03 ? C1 AZM 401 B 1 HETATM 2 C C2 AZM . . . H 5 12.196 14.859 -19.756 1 103.03 ? C2 AZM 401 B 1 HETATM 3 C C3 AZM . . . H 5 13.663 12.828 -19.809 1 103.03 ? C3 AZM 401 B 1 HETATM 4 C C4 AZM . . . H 5 14.386 11.877 -18.87 1 103.03 ? C4 AZM 401 B 1 HETATM 5 N N1 AZM . . . H 5 8.701 17.815 -21.224 1 103.03 ? N1 AZM 401 B 1 HETATM 6 N N2 AZM . . . H 5 11.657 15.644 -18.876 1 103.03 ? N2 AZM 401 B 1 HETATM 7 N N3 AZM . . . H 5 10.932 16.645 -19.472 1 103.03 ? N3 AZM 401 B 1 HETATM 8 N N4 AZM . . . H 5 12.939 13.847 -19.187 1 103.03 ? N4 AZM 401 B 1 HETATM 9 O O1 AZM . . . H 5 10.1 17.086 -23.176 1 103.03 ? O1 AZM 401 B 1 HETATM 10 O O2 AZM . . . H 5 10.98 18.876 -21.893 1 103.03 ? O2 AZM 401 B 1 HETATM 11 O O3 AZM . . . H 5 13.768 12.638 -21.015 1 103.03 ? O3 AZM 401 B 1 HETATM 12 S S1 AZM . . . H 5 10.16 17.671 -21.837 1 103.03 ? S1 AZM 401 B 1 HETATM 13 S S2 AZM . . . H 5 11.905 15.208 -21.385 1 103.03 ? S2 AZM 401 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #