data_1RJC # _model_server_result.job_id 4EP5ij0sJ9oih7FKNOJVHA _model_server_result.datetime_utc '2024-11-05 00:35:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rjc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1758}' # _entry.id 1RJC # _exptl.entry_id 1RJC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1RJC _cell.length_a 50.02 _cell.length_b 68.36 _cell.length_c 72.05 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RJC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.014 ? disulf ? disulf2 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 A SG CYS 33 A CYS 33 1_555 A SG CYS 108 A CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 B SG CYS 6 B CYS 6 1_555 B SG CYS 127 B CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 B SG CYS 30 B CYS 30 1_555 B SG CYS 115 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf6 B SG CYS 64 B CYS 64 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 B SG CYS 76 B CYS 76 1_555 B SG CYS 94 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 1RJC _atom_sites.fract_transf_matrix[1][1] 0.019992 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014628 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013879 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 138 106 PO4 PO4 . D 4 GOL B 1 1758 1758 GOL GOL . E 5 HOH A 1 139 4 HOH HOH . E 5 HOH A 2 140 8 HOH HOH . E 5 HOH A 3 141 9 HOH HOH . E 5 HOH A 4 142 25 HOH HOH . E 5 HOH A 5 143 29 HOH HOH . E 5 HOH A 6 144 30 HOH HOH . E 5 HOH A 7 145 32 HOH HOH . E 5 HOH A 8 146 44 HOH HOH . E 5 HOH A 9 147 46 HOH HOH . E 5 HOH A 10 148 50 HOH HOH . E 5 HOH A 11 149 51 HOH HOH . E 5 HOH A 12 150 52 HOH HOH . E 5 HOH A 13 151 54 HOH HOH . E 5 HOH A 14 152 58 HOH HOH . E 5 HOH A 15 153 61 HOH HOH . E 5 HOH A 16 154 72 HOH HOH . E 5 HOH A 17 155 80 HOH HOH . E 5 HOH A 18 156 82 HOH HOH . E 5 HOH A 19 157 83 HOH HOH . E 5 HOH A 20 158 85 HOH HOH . E 5 HOH A 21 159 87 HOH HOH . E 5 HOH A 22 160 91 HOH HOH . E 5 HOH A 23 161 92 HOH HOH . E 5 HOH A 24 162 93 HOH HOH . E 5 HOH A 25 163 95 HOH HOH . E 5 HOH A 26 164 97 HOH HOH . E 5 HOH A 27 165 98 HOH HOH . E 5 HOH A 28 166 99 HOH HOH . E 5 HOH A 29 167 100 HOH HOH . E 5 HOH A 30 168 105 HOH HOH . E 5 HOH A 31 169 116 HOH HOH . E 5 HOH A 32 170 119 HOH HOH . E 5 HOH A 33 171 120 HOH HOH . E 5 HOH A 34 172 124 HOH HOH . E 5 HOH A 35 173 131 HOH HOH . E 5 HOH A 36 174 133 HOH HOH . E 5 HOH A 37 175 134 HOH HOH . E 5 HOH A 38 176 137 HOH HOH . E 5 HOH A 39 177 140 HOH HOH . E 5 HOH A 40 178 141 HOH HOH . E 5 HOH A 41 179 146 HOH HOH . E 5 HOH A 42 180 147 HOH HOH . E 5 HOH A 43 181 150 HOH HOH . E 5 HOH A 44 182 151 HOH HOH . E 5 HOH A 45 183 155 HOH HOH . E 5 HOH A 46 184 159 HOH HOH . E 5 HOH A 47 185 160 HOH HOH . E 5 HOH A 48 186 164 HOH HOH . E 5 HOH A 49 187 165 HOH HOH . E 5 HOH A 50 188 167 HOH HOH . E 5 HOH A 51 189 174 HOH HOH . E 5 HOH A 52 190 175 HOH HOH . E 5 HOH A 53 191 176 HOH HOH . E 5 HOH A 54 192 177 HOH HOH . E 5 HOH A 55 193 178 HOH HOH . E 5 HOH A 56 194 185 HOH HOH . E 5 HOH A 57 195 193 HOH HOH . E 5 HOH A 58 196 194 HOH HOH . E 5 HOH A 59 197 195 HOH HOH . E 5 HOH A 60 198 196 HOH HOH . E 5 HOH A 61 199 200 HOH HOH . E 5 HOH A 62 200 203 HOH HOH . E 5 HOH A 63 201 209 HOH HOH . E 5 HOH A 64 202 211 HOH HOH . E 5 HOH A 65 203 212 HOH HOH . E 5 HOH A 66 204 222 HOH HOH . E 5 HOH A 67 205 230 HOH HOH . E 5 HOH A 68 206 233 HOH HOH . E 5 HOH A 69 207 234 HOH HOH . E 5 HOH A 70 208 235 HOH HOH . E 5 HOH A 71 209 245 HOH HOH . E 5 HOH A 72 210 248 HOH HOH . E 5 HOH A 73 211 255 HOH HOH . E 5 HOH A 74 212 261 HOH HOH . E 5 HOH A 75 213 262 HOH HOH . E 5 HOH A 76 214 286 HOH HOH . F 5 HOH B 1 1759 1 HOH HOH . F 5 HOH B 2 1760 2 HOH HOH . F 5 HOH B 3 1761 3 HOH HOH . F 5 HOH B 4 1762 5 HOH HOH . F 5 HOH B 5 1763 6 HOH HOH . F 5 HOH B 6 1764 7 HOH HOH . F 5 HOH B 7 1765 10 HOH HOH . F 5 HOH B 8 1766 11 HOH HOH . F 5 HOH B 9 1767 12 HOH HOH . F 5 HOH B 10 1768 13 HOH HOH . F 5 HOH B 11 1769 14 HOH HOH . F 5 HOH B 12 1770 15 HOH HOH . F 5 HOH B 13 1771 16 HOH HOH . F 5 HOH B 14 1772 17 HOH HOH . F 5 HOH B 15 1773 18 HOH HOH . F 5 HOH B 16 1774 19 HOH HOH . F 5 HOH B 17 1775 20 HOH HOH . F 5 HOH B 18 1776 21 HOH HOH . F 5 HOH B 19 1777 22 HOH HOH . F 5 HOH B 20 1778 23 HOH HOH . F 5 HOH B 21 1779 24 HOH HOH . F 5 HOH B 22 1780 27 HOH HOH . F 5 HOH B 23 1781 28 HOH HOH . F 5 HOH B 24 1782 31 HOH HOH . F 5 HOH B 25 1783 33 HOH HOH . F 5 HOH B 26 1784 34 HOH HOH . F 5 HOH B 27 1785 35 HOH HOH . F 5 HOH B 28 1786 36 HOH HOH . F 5 HOH B 29 1787 37 HOH HOH . F 5 HOH B 30 1788 38 HOH HOH . F 5 HOH B 31 1789 39 HOH HOH . F 5 HOH B 32 1790 40 HOH HOH . F 5 HOH B 33 1791 41 HOH HOH . F 5 HOH B 34 1792 42 HOH HOH . F 5 HOH B 35 1793 43 HOH HOH . F 5 HOH B 36 1794 45 HOH HOH . F 5 HOH B 37 1795 47 HOH HOH . F 5 HOH B 38 1796 48 HOH HOH . F 5 HOH B 39 1797 49 HOH HOH . F 5 HOH B 40 1798 53 HOH HOH . F 5 HOH B 41 1799 55 HOH HOH . F 5 HOH B 42 1800 56 HOH HOH . F 5 HOH B 43 1801 57 HOH HOH . F 5 HOH B 44 1802 59 HOH HOH . F 5 HOH B 45 1803 60 HOH HOH . F 5 HOH B 46 1804 63 HOH HOH . F 5 HOH B 47 1805 64 HOH HOH . F 5 HOH B 48 1806 65 HOH HOH . F 5 HOH B 49 1807 66 HOH HOH . F 5 HOH B 50 1808 67 HOH HOH . F 5 HOH B 51 1809 68 HOH HOH . F 5 HOH B 52 1810 69 HOH HOH . F 5 HOH B 53 1811 70 HOH HOH . F 5 HOH B 54 1812 71 HOH HOH . F 5 HOH B 55 1813 73 HOH HOH . F 5 HOH B 56 1814 75 HOH HOH . F 5 HOH B 57 1815 76 HOH HOH . F 5 HOH B 58 1816 77 HOH HOH . F 5 HOH B 59 1817 78 HOH HOH . F 5 HOH B 60 1818 79 HOH HOH . F 5 HOH B 61 1819 81 HOH HOH . F 5 HOH B 62 1820 84 HOH HOH . F 5 HOH B 63 1821 86 HOH HOH . F 5 HOH B 64 1822 88 HOH HOH . F 5 HOH B 65 1823 89 HOH HOH . F 5 HOH B 66 1824 90 HOH HOH . F 5 HOH B 67 1825 94 HOH HOH . F 5 HOH B 68 1826 96 HOH HOH . F 5 HOH B 69 1827 101 HOH HOH . F 5 HOH B 70 1828 102 HOH HOH . F 5 HOH B 71 1829 103 HOH HOH . F 5 HOH B 72 1830 104 HOH HOH . F 5 HOH B 73 1831 108 HOH HOH . F 5 HOH B 74 1832 109 HOH HOH . F 5 HOH B 75 1833 110 HOH HOH . F 5 HOH B 76 1834 111 HOH HOH . F 5 HOH B 77 1835 112 HOH HOH . F 5 HOH B 78 1836 113 HOH HOH . F 5 HOH B 79 1837 114 HOH HOH . F 5 HOH B 80 1838 115 HOH HOH . F 5 HOH B 81 1839 118 HOH HOH . F 5 HOH B 82 1840 121 HOH HOH . F 5 HOH B 83 1841 123 HOH HOH . F 5 HOH B 84 1842 125 HOH HOH . F 5 HOH B 85 1843 126 HOH HOH . F 5 HOH B 86 1844 128 HOH HOH . F 5 HOH B 87 1845 129 HOH HOH . F 5 HOH B 88 1846 132 HOH HOH . F 5 HOH B 89 1847 142 HOH HOH . F 5 HOH B 90 1848 143 HOH HOH . F 5 HOH B 91 1849 144 HOH HOH . F 5 HOH B 92 1850 149 HOH HOH . F 5 HOH B 93 1851 152 HOH HOH . F 5 HOH B 94 1852 161 HOH HOH . F 5 HOH B 95 1853 171 HOH HOH . F 5 HOH B 96 1854 188 HOH HOH . F 5 HOH B 97 1855 191 HOH HOH . F 5 HOH B 98 1856 192 HOH HOH . F 5 HOH B 99 1857 197 HOH HOH . F 5 HOH B 100 1858 201 HOH HOH . F 5 HOH B 101 1859 202 HOH HOH . F 5 HOH B 102 1860 205 HOH HOH . F 5 HOH B 103 1861 206 HOH HOH . F 5 HOH B 104 1862 210 HOH HOH . F 5 HOH B 105 1863 216 HOH HOH . F 5 HOH B 106 1864 223 HOH HOH . F 5 HOH B 107 1865 237 HOH HOH . F 5 HOH B 108 1866 238 HOH HOH . F 5 HOH B 109 1867 240 HOH HOH . F 5 HOH B 110 1868 265 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 34.186 60.46 7.976 1 24.19 ? C1 GOL 1758 B 1 HETATM 2 O O1 GOL . . . D 4 33.158 60.162 7.041 1 22.69 ? O1 GOL 1758 B 1 HETATM 3 C C2 GOL . . . D 4 33.68 61.103 9.265 1 24.04 ? C2 GOL 1758 B 1 HETATM 4 O O2 GOL . . . D 4 33.066 62.362 9.046 1 22.82 ? O2 GOL 1758 B 1 HETATM 5 C C3 GOL . . . D 4 34.824 61.28 10.255 1 24.24 ? C3 GOL 1758 B 1 HETATM 6 O O3 GOL . . . D 4 34.391 60.802 11.518 1 27.48 ? O3 GOL 1758 B 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #