data_1RJF
#
_model_server_result.job_id            2apLvmXtQdkbA1qbJEL2WA 
_model_server_result.datetime_utc      '2024-10-31 17:29:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1rjf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":338}' 
#
_entry.id    1RJF 
#
_exptl.entry_id    1RJF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1RJF 
_cell.length_a            112.395 
_cell.length_b            112.395 
_cell.length_c            162.848 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1RJF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,L 1 1 
B,H,I,M 2 1 
C,J,K,N 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 138 n n 
C1 C2 GOL sing 139 n n 
C1 H11 GOL sing 140 n n 
C1 H12 GOL sing 141 n n 
O1 HO1 GOL sing 142 n n 
C2 O2 GOL sing 143 n n 
C2 C3 GOL sing 144 n n 
C2 H2 GOL sing 145 n n 
O2 HO2 GOL sing 146 n n 
C3 O3 GOL sing 147 n n 
C3 H31 GOL sing 148 n n 
C3 H32 GOL sing 149 n n 
O3 HO3 GOL sing 150 n n 
#
_atom_sites.entry_id                     1RJF 
_atom_sites.fract_transf_matrix[1][1]    0.008897 
_atom_sites.fract_transf_matrix[1][2]    0.005137 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010274 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006141 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 BME A 1 335 4 BME BME . 
E 2 BME A 1 336 7 BME BME . 
F 3 GOL A 1 337 1 GOL GOL . 
G 3 GOL A 1 338 1 GOL GOL . 
H 2 BME B 1 335 5 BME BME . 
I 2 BME B 1 336 8 BME BME . 
J 2 BME C 1 335 6 BME BME . 
K 2 BME C 1 336 9 BME BME . 
L 4 HOH A 1 339 4 HOH HOH . 
L 4 HOH A 2 340 5 HOH HOH . 
L 4 HOH A 3 341 7 HOH HOH . 
L 4 HOH A 4 342 8 HOH HOH . 
L 4 HOH A 5 343 9 HOH HOH . 
L 4 HOH A 6 344 12 HOH HOH . 
L 4 HOH A 7 345 14 HOH HOH . 
L 4 HOH A 8 346 15 HOH HOH . 
L 4 HOH A 9 347 16 HOH HOH . 
L 4 HOH A 10 348 17 HOH HOH . 
L 4 HOH A 11 349 18 HOH HOH . 
L 4 HOH A 12 350 19 HOH HOH . 
L 4 HOH A 13 351 22 HOH HOH . 
L 4 HOH A 14 352 23 HOH HOH . 
L 4 HOH A 15 353 24 HOH HOH . 
L 4 HOH A 16 354 30 HOH HOH . 
L 4 HOH A 17 355 31 HOH HOH . 
L 4 HOH A 18 356 35 HOH HOH . 
L 4 HOH A 19 357 36 HOH HOH . 
L 4 HOH A 20 358 38 HOH HOH . 
L 4 HOH A 21 359 39 HOH HOH . 
L 4 HOH A 22 360 40 HOH HOH . 
L 4 HOH A 23 361 44 HOH HOH . 
L 4 HOH A 24 362 45 HOH HOH . 
L 4 HOH A 25 363 50 HOH HOH . 
L 4 HOH A 26 364 53 HOH HOH . 
L 4 HOH A 27 365 55 HOH HOH . 
L 4 HOH A 28 366 56 HOH HOH . 
L 4 HOH A 29 367 58 HOH HOH . 
L 4 HOH A 30 368 59 HOH HOH . 
L 4 HOH A 31 369 61 HOH HOH . 
L 4 HOH A 32 370 63 HOH HOH . 
L 4 HOH A 33 371 65 HOH HOH . 
L 4 HOH A 34 372 67 HOH HOH . 
L 4 HOH A 35 373 69 HOH HOH . 
L 4 HOH A 36 374 70 HOH HOH . 
L 4 HOH A 37 375 71 HOH HOH . 
L 4 HOH A 38 376 74 HOH HOH . 
L 4 HOH A 39 377 75 HOH HOH . 
L 4 HOH A 40 378 76 HOH HOH . 
L 4 HOH A 41 379 77 HOH HOH . 
L 4 HOH A 42 380 82 HOH HOH . 
L 4 HOH A 43 381 87 HOH HOH . 
L 4 HOH A 44 382 88 HOH HOH . 
L 4 HOH A 45 383 91 HOH HOH . 
L 4 HOH A 46 384 94 HOH HOH . 
L 4 HOH A 47 385 95 HOH HOH . 
L 4 HOH A 48 386 96 HOH HOH . 
L 4 HOH A 49 387 99 HOH HOH . 
L 4 HOH A 50 388 100 HOH HOH . 
L 4 HOH A 51 389 101 HOH HOH . 
L 4 HOH A 52 390 102 HOH HOH . 
L 4 HOH A 53 391 104 HOH HOH . 
L 4 HOH A 54 392 108 HOH HOH . 
L 4 HOH A 55 393 109 HOH HOH . 
L 4 HOH A 56 394 110 HOH HOH . 
L 4 HOH A 57 395 111 HOH HOH . 
L 4 HOH A 58 396 114 HOH HOH . 
L 4 HOH A 59 397 118 HOH HOH . 
L 4 HOH A 60 398 119 HOH HOH . 
L 4 HOH A 61 399 121 HOH HOH . 
L 4 HOH A 62 400 122 HOH HOH . 
L 4 HOH A 63 401 124 HOH HOH . 
L 4 HOH A 64 402 128 HOH HOH . 
L 4 HOH A 65 403 129 HOH HOH . 
L 4 HOH A 66 404 130 HOH HOH . 
L 4 HOH A 67 405 136 HOH HOH . 
L 4 HOH A 68 406 137 HOH HOH . 
L 4 HOH A 69 407 138 HOH HOH . 
L 4 HOH A 70 408 139 HOH HOH . 
L 4 HOH A 71 409 143 HOH HOH . 
L 4 HOH A 72 410 147 HOH HOH . 
L 4 HOH A 73 411 149 HOH HOH . 
L 4 HOH A 74 412 150 HOH HOH . 
L 4 HOH A 75 413 154 HOH HOH . 
L 4 HOH A 76 414 155 HOH HOH . 
L 4 HOH A 77 415 157 HOH HOH . 
L 4 HOH A 78 416 158 HOH HOH . 
L 4 HOH A 79 417 160 HOH HOH . 
L 4 HOH A 80 418 163 HOH HOH . 
L 4 HOH A 81 419 167 HOH HOH . 
L 4 HOH A 82 420 172 HOH HOH . 
L 4 HOH A 83 421 175 HOH HOH . 
L 4 HOH A 84 422 176 HOH HOH . 
L 4 HOH A 85 423 183 HOH HOH . 
L 4 HOH A 86 424 187 HOH HOH . 
L 4 HOH A 87 425 190 HOH HOH . 
L 4 HOH A 88 426 195 HOH HOH . 
L 4 HOH A 89 427 196 HOH HOH . 
L 4 HOH A 90 428 197 HOH HOH . 
L 4 HOH A 91 429 201 HOH HOH . 
L 4 HOH A 92 430 205 HOH HOH . 
L 4 HOH A 93 431 206 HOH HOH . 
L 4 HOH A 94 432 208 HOH HOH . 
L 4 HOH A 95 433 210 HOH HOH . 
L 4 HOH A 96 434 214 HOH HOH . 
L 4 HOH A 97 435 221 HOH HOH . 
L 4 HOH A 98 436 226 HOH HOH . 
L 4 HOH A 99 437 227 HOH HOH . 
L 4 HOH A 100 438 231 HOH HOH . 
L 4 HOH A 101 439 232 HOH HOH . 
L 4 HOH A 102 440 234 HOH HOH . 
L 4 HOH A 103 441 237 HOH HOH . 
L 4 HOH A 104 442 238 HOH HOH . 
L 4 HOH A 105 443 241 HOH HOH . 
L 4 HOH A 106 444 242 HOH HOH . 
L 4 HOH A 107 445 243 HOH HOH . 
L 4 HOH A 108 446 246 HOH HOH . 
L 4 HOH A 109 447 248 HOH HOH . 
L 4 HOH A 110 448 250 HOH HOH . 
L 4 HOH A 111 449 251 HOH HOH . 
L 4 HOH A 112 450 254 HOH HOH . 
L 4 HOH A 113 451 256 HOH HOH . 
L 4 HOH A 114 452 257 HOH HOH . 
L 4 HOH A 115 453 259 HOH HOH . 
L 4 HOH A 116 454 262 HOH HOH . 
L 4 HOH A 117 455 267 HOH HOH . 
L 4 HOH A 118 456 268 HOH HOH . 
L 4 HOH A 119 457 270 HOH HOH . 
M 4 HOH B 1 337 1 HOH HOH . 
M 4 HOH B 2 338 2 HOH HOH . 
M 4 HOH B 3 339 3 HOH HOH . 
M 4 HOH B 4 340 6 HOH HOH . 
M 4 HOH B 5 341 10 HOH HOH . 
M 4 HOH B 6 342 11 HOH HOH . 
M 4 HOH B 7 343 13 HOH HOH . 
M 4 HOH B 8 344 20 HOH HOH . 
M 4 HOH B 9 345 21 HOH HOH . 
M 4 HOH B 10 346 25 HOH HOH . 
M 4 HOH B 11 347 26 HOH HOH . 
M 4 HOH B 12 348 27 HOH HOH . 
M 4 HOH B 13 349 28 HOH HOH . 
M 4 HOH B 14 350 29 HOH HOH . 
M 4 HOH B 15 351 33 HOH HOH . 
M 4 HOH B 16 352 34 HOH HOH . 
M 4 HOH B 17 353 37 HOH HOH . 
M 4 HOH B 18 354 41 HOH HOH . 
M 4 HOH B 19 355 42 HOH HOH . 
M 4 HOH B 20 356 43 HOH HOH . 
M 4 HOH B 21 357 46 HOH HOH . 
M 4 HOH B 22 358 48 HOH HOH . 
M 4 HOH B 23 359 49 HOH HOH . 
M 4 HOH B 24 360 51 HOH HOH . 
M 4 HOH B 25 361 52 HOH HOH . 
M 4 HOH B 26 362 54 HOH HOH . 
M 4 HOH B 27 363 57 HOH HOH . 
M 4 HOH B 28 364 62 HOH HOH . 
M 4 HOH B 29 365 64 HOH HOH . 
M 4 HOH B 30 366 66 HOH HOH . 
M 4 HOH B 31 367 68 HOH HOH . 
M 4 HOH B 32 368 72 HOH HOH . 
M 4 HOH B 33 369 78 HOH HOH . 
M 4 HOH B 34 370 79 HOH HOH . 
M 4 HOH B 35 371 80 HOH HOH . 
M 4 HOH B 36 372 83 HOH HOH . 
M 4 HOH B 37 373 84 HOH HOH . 
M 4 HOH B 38 374 85 HOH HOH . 
M 4 HOH B 39 375 89 HOH HOH . 
M 4 HOH B 40 376 90 HOH HOH . 
M 4 HOH B 41 377 97 HOH HOH . 
M 4 HOH B 42 378 98 HOH HOH . 
M 4 HOH B 43 379 112 HOH HOH . 
M 4 HOH B 44 380 116 HOH HOH . 
M 4 HOH B 45 381 120 HOH HOH . 
M 4 HOH B 46 382 127 HOH HOH . 
M 4 HOH B 47 383 131 HOH HOH . 
M 4 HOH B 48 384 134 HOH HOH . 
M 4 HOH B 49 385 135 HOH HOH . 
M 4 HOH B 50 386 140 HOH HOH . 
M 4 HOH B 51 387 142 HOH HOH . 
M 4 HOH B 52 388 144 HOH HOH . 
M 4 HOH B 53 389 148 HOH HOH . 
M 4 HOH B 54 390 159 HOH HOH . 
M 4 HOH B 55 391 161 HOH HOH . 
M 4 HOH B 56 392 165 HOH HOH . 
M 4 HOH B 57 393 166 HOH HOH . 
M 4 HOH B 58 394 168 HOH HOH . 
M 4 HOH B 59 395 169 HOH HOH . 
M 4 HOH B 60 396 170 HOH HOH . 
M 4 HOH B 61 397 171 HOH HOH . 
M 4 HOH B 62 398 173 HOH HOH . 
M 4 HOH B 63 399 174 HOH HOH . 
M 4 HOH B 64 400 178 HOH HOH . 
M 4 HOH B 65 401 180 HOH HOH . 
M 4 HOH B 66 402 181 HOH HOH . 
M 4 HOH B 67 403 182 HOH HOH . 
M 4 HOH B 68 404 184 HOH HOH . 
M 4 HOH B 69 405 185 HOH HOH . 
M 4 HOH B 70 406 188 HOH HOH . 
M 4 HOH B 71 407 189 HOH HOH . 
M 4 HOH B 72 408 191 HOH HOH . 
M 4 HOH B 73 409 193 HOH HOH . 
M 4 HOH B 74 410 194 HOH HOH . 
M 4 HOH B 75 411 198 HOH HOH . 
M 4 HOH B 76 412 199 HOH HOH . 
M 4 HOH B 77 413 200 HOH HOH . 
M 4 HOH B 78 414 203 HOH HOH . 
M 4 HOH B 79 415 207 HOH HOH . 
M 4 HOH B 80 416 211 HOH HOH . 
M 4 HOH B 81 417 213 HOH HOH . 
M 4 HOH B 82 418 218 HOH HOH . 
M 4 HOH B 83 419 220 HOH HOH . 
M 4 HOH B 84 420 222 HOH HOH . 
M 4 HOH B 85 421 223 HOH HOH . 
M 4 HOH B 86 422 225 HOH HOH . 
M 4 HOH B 87 423 228 HOH HOH . 
M 4 HOH B 88 424 233 HOH HOH . 
M 4 HOH B 89 425 235 HOH HOH . 
M 4 HOH B 90 426 236 HOH HOH . 
M 4 HOH B 91 427 240 HOH HOH . 
M 4 HOH B 92 428 244 HOH HOH . 
M 4 HOH B 93 429 245 HOH HOH . 
M 4 HOH B 94 430 249 HOH HOH . 
M 4 HOH B 95 431 252 HOH HOH . 
M 4 HOH B 96 432 258 HOH HOH . 
M 4 HOH B 97 433 260 HOH HOH . 
M 4 HOH B 98 434 261 HOH HOH . 
M 4 HOH B 99 435 263 HOH HOH . 
M 4 HOH B 100 436 264 HOH HOH . 
M 4 HOH B 101 437 265 HOH HOH . 
M 4 HOH B 102 438 266 HOH HOH . 
M 4 HOH B 103 439 272 HOH HOH . 
N 4 HOH C 1 337 32 HOH HOH . 
N 4 HOH C 2 338 47 HOH HOH . 
N 4 HOH C 3 339 60 HOH HOH . 
N 4 HOH C 4 340 73 HOH HOH . 
N 4 HOH C 5 341 81 HOH HOH . 
N 4 HOH C 6 342 86 HOH HOH . 
N 4 HOH C 7 343 92 HOH HOH . 
N 4 HOH C 8 344 93 HOH HOH . 
N 4 HOH C 9 345 103 HOH HOH . 
N 4 HOH C 10 346 105 HOH HOH . 
N 4 HOH C 11 347 106 HOH HOH . 
N 4 HOH C 12 348 107 HOH HOH . 
N 4 HOH C 13 349 113 HOH HOH . 
N 4 HOH C 14 350 115 HOH HOH . 
N 4 HOH C 15 351 117 HOH HOH . 
N 4 HOH C 16 352 123 HOH HOH . 
N 4 HOH C 17 353 125 HOH HOH . 
N 4 HOH C 18 354 126 HOH HOH . 
N 4 HOH C 19 355 132 HOH HOH . 
N 4 HOH C 20 356 133 HOH HOH . 
N 4 HOH C 21 357 141 HOH HOH . 
N 4 HOH C 22 358 145 HOH HOH . 
N 4 HOH C 23 359 146 HOH HOH . 
N 4 HOH C 24 360 151 HOH HOH . 
N 4 HOH C 25 361 152 HOH HOH . 
N 4 HOH C 26 362 153 HOH HOH . 
N 4 HOH C 27 363 156 HOH HOH . 
N 4 HOH C 28 364 162 HOH HOH . 
N 4 HOH C 29 365 164 HOH HOH . 
N 4 HOH C 30 366 177 HOH HOH . 
N 4 HOH C 31 367 179 HOH HOH . 
N 4 HOH C 32 368 186 HOH HOH . 
N 4 HOH C 33 369 192 HOH HOH . 
N 4 HOH C 34 370 202 HOH HOH . 
N 4 HOH C 35 371 204 HOH HOH . 
N 4 HOH C 36 372 209 HOH HOH . 
N 4 HOH C 37 373 212 HOH HOH . 
N 4 HOH C 38 374 215 HOH HOH . 
N 4 HOH C 39 375 216 HOH HOH . 
N 4 HOH C 40 376 217 HOH HOH . 
N 4 HOH C 41 377 219 HOH HOH . 
N 4 HOH C 42 378 224 HOH HOH . 
N 4 HOH C 43 379 229 HOH HOH . 
N 4 HOH C 44 380 230 HOH HOH . 
N 4 HOH C 45 381 239 HOH HOH . 
N 4 HOH C 46 382 247 HOH HOH . 
N 4 HOH C 47 383 253 HOH HOH . 
N 4 HOH C 48 384 255 HOH HOH . 
N 4 HOH C 49 385 269 HOH HOH . 
N 4 HOH C 50 386 271 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 3 -1.262 96.055 9.069 1 65.25 ? C1 GOL 338 A 1 
HETATM 2 O O1 GOL . . . G 3 -0.2 96.185 9.987 1 63.71 ? O1 GOL 338 A 1 
HETATM 3 C C2 GOL . . . G 3 -1.402 94.596 8.646 1 65.6 ? C2 GOL 338 A 1 
HETATM 4 O O2 GOL . . . G 3 -0.428 94.286 7.673 1 64.83 ? O2 GOL 338 A 1 
HETATM 5 C C3 GOL . . . G 3 -2.796 94.328 8.084 1 65.13 ? C3 GOL 338 A 1 
HETATM 6 O O3 GOL . . . G 3 -3.179 95.356 7.195 1 64.79 ? O3 GOL 338 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#