data_1RKP # _model_server_result.job_id n9JgrdLDKxV_zo1U6JFVsw _model_server_result.datetime_utc '2024-11-05 21:00:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rkp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 1RKP # _exptl.entry_id 1RKP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1RKP _cell.length_a 74.456 _cell.length_b 74.456 _cell.length_c 130.132 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RKP _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E O HOH . A HOH 1 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc2 E O HOH . A HOH 2 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc3 E O HOH . A HOH 2 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc4 E O HOH . A HOH 3 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc5 E O HOH . A HOH 4 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc6 E O HOH . A HOH 5 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc7 E O HOH . A HOH 6 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc8 B ZN ZN . A ZN 501 1_555 A NE2 HIS 83 A HIS 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc9 B ZN ZN . A ZN 501 1_555 A NE2 HIS 119 A HIS 653 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc10 B ZN ZN . A ZN 501 1_555 A OD2 ASP 120 A ASP 654 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc11 B ZN ZN . A ZN 501 1_555 A OD1 ASP 230 A ASP 764 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc12 C MG MG . A MG 502 1_555 A OD1 ASP 120 A ASP 654 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1RKP _atom_sites.fract_transf_matrix[1][1] 0.013431 _atom_sites.fract_transf_matrix[1][2] 0.007754 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015508 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007685 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 501 501 ZN ZN . C 3 MG A 1 502 502 MG MG . D 4 IBM A 1 201 201 IBM IBM . E 5 HOH A 1 1 1 HOH TIP . E 5 HOH A 2 2 2 HOH TIP . E 5 HOH A 3 3 3 HOH TIP . E 5 HOH A 4 4 4 HOH TIP . E 5 HOH A 5 5 5 HOH TIP . E 5 HOH A 6 6 6 HOH TIP . E 5 HOH A 7 7 7 HOH TIP . E 5 HOH A 8 8 8 HOH TIP . E 5 HOH A 9 9 9 HOH TIP . E 5 HOH A 10 10 10 HOH TIP . E 5 HOH A 11 11 11 HOH TIP . E 5 HOH A 12 12 12 HOH TIP . E 5 HOH A 13 13 13 HOH TIP . E 5 HOH A 14 14 14 HOH TIP . E 5 HOH A 15 15 15 HOH TIP . E 5 HOH A 16 16 16 HOH TIP . E 5 HOH A 17 17 17 HOH TIP . E 5 HOH A 18 18 18 HOH TIP . E 5 HOH A 19 19 19 HOH TIP . E 5 HOH A 20 20 20 HOH TIP . E 5 HOH A 21 21 21 HOH TIP . E 5 HOH A 22 22 22 HOH TIP . E 5 HOH A 23 23 23 HOH TIP . E 5 HOH A 24 24 24 HOH TIP . E 5 HOH A 25 25 25 HOH TIP . E 5 HOH A 26 26 26 HOH TIP . E 5 HOH A 27 27 27 HOH TIP . E 5 HOH A 28 28 28 HOH TIP . E 5 HOH A 29 29 29 HOH TIP . E 5 HOH A 30 30 30 HOH TIP . E 5 HOH A 31 31 31 HOH TIP . E 5 HOH A 32 32 32 HOH TIP . E 5 HOH A 33 33 33 HOH TIP . E 5 HOH A 34 34 34 HOH TIP . E 5 HOH A 35 35 35 HOH TIP . E 5 HOH A 36 36 36 HOH TIP . E 5 HOH A 37 37 37 HOH TIP . E 5 HOH A 38 38 38 HOH TIP . E 5 HOH A 39 39 39 HOH TIP . E 5 HOH A 40 40 40 HOH TIP . E 5 HOH A 41 41 41 HOH TIP . E 5 HOH A 42 42 42 HOH TIP . E 5 HOH A 43 43 43 HOH TIP . E 5 HOH A 44 44 44 HOH TIP . E 5 HOH A 45 45 45 HOH TIP . E 5 HOH A 46 46 46 HOH TIP . E 5 HOH A 47 47 47 HOH TIP . E 5 HOH A 48 48 48 HOH TIP . E 5 HOH A 49 49 49 HOH TIP . E 5 HOH A 50 50 50 HOH TIP . E 5 HOH A 51 51 51 HOH TIP . E 5 HOH A 52 52 52 HOH TIP . E 5 HOH A 53 53 53 HOH TIP . E 5 HOH A 54 54 54 HOH TIP . E 5 HOH A 55 55 55 HOH TIP . E 5 HOH A 56 56 56 HOH TIP . E 5 HOH A 57 57 57 HOH TIP . E 5 HOH A 58 58 58 HOH TIP . E 5 HOH A 59 59 59 HOH TIP . E 5 HOH A 60 60 60 HOH TIP . E 5 HOH A 61 61 61 HOH TIP . E 5 HOH A 62 62 62 HOH TIP . E 5 HOH A 63 63 63 HOH TIP . E 5 HOH A 64 64 64 HOH TIP . E 5 HOH A 65 65 65 HOH TIP . E 5 HOH A 66 66 66 HOH TIP . E 5 HOH A 67 67 67 HOH TIP . E 5 HOH A 68 68 68 HOH TIP . E 5 HOH A 69 69 69 HOH TIP . E 5 HOH A 70 70 70 HOH TIP . E 5 HOH A 71 71 71 HOH TIP . E 5 HOH A 72 72 72 HOH TIP . E 5 HOH A 73 73 73 HOH TIP . E 5 HOH A 74 74 74 HOH TIP . E 5 HOH A 75 75 75 HOH TIP . E 5 HOH A 76 76 76 HOH TIP . E 5 HOH A 77 77 77 HOH TIP . E 5 HOH A 78 78 78 HOH TIP . E 5 HOH A 79 79 79 HOH TIP . E 5 HOH A 80 80 80 HOH TIP . E 5 HOH A 81 81 81 HOH TIP . E 5 HOH A 82 82 82 HOH TIP . E 5 HOH A 83 83 83 HOH TIP . E 5 HOH A 84 84 84 HOH TIP . E 5 HOH A 85 85 85 HOH TIP . E 5 HOH A 86 86 86 HOH TIP . E 5 HOH A 87 87 87 HOH TIP . E 5 HOH A 88 88 88 HOH TIP . E 5 HOH A 89 89 89 HOH TIP . E 5 HOH A 90 90 90 HOH TIP . E 5 HOH A 91 91 91 HOH TIP . E 5 HOH A 92 92 92 HOH TIP . E 5 HOH A 93 93 93 HOH TIP . E 5 HOH A 94 94 94 HOH TIP . E 5 HOH A 95 95 95 HOH TIP . E 5 HOH A 96 96 96 HOH TIP . E 5 HOH A 97 97 97 HOH TIP . E 5 HOH A 98 98 98 HOH TIP . E 5 HOH A 99 99 99 HOH TIP . E 5 HOH A 100 100 100 HOH TIP . E 5 HOH A 101 101 101 HOH TIP . E 5 HOH A 102 102 102 HOH TIP . E 5 HOH A 103 103 103 HOH TIP . E 5 HOH A 104 104 104 HOH TIP . E 5 HOH A 105 105 105 HOH TIP . E 5 HOH A 106 106 106 HOH TIP . E 5 HOH A 107 107 107 HOH TIP . E 5 HOH A 108 108 108 HOH TIP . E 5 HOH A 109 109 109 HOH TIP . E 5 HOH A 110 110 110 HOH TIP . E 5 HOH A 111 111 111 HOH TIP . E 5 HOH A 112 112 112 HOH TIP . E 5 HOH A 113 113 113 HOH TIP . E 5 HOH A 114 114 114 HOH TIP . E 5 HOH A 115 115 115 HOH TIP . E 5 HOH A 116 116 116 HOH TIP . E 5 HOH A 117 117 117 HOH TIP . E 5 HOH A 118 118 118 HOH TIP . E 5 HOH A 119 119 119 HOH TIP . E 5 HOH A 120 120 120 HOH TIP . E 5 HOH A 121 121 121 HOH TIP . E 5 HOH A 122 122 122 HOH TIP . E 5 HOH A 123 123 123 HOH TIP . E 5 HOH A 124 124 124 HOH TIP . E 5 HOH A 125 125 125 HOH TIP . E 5 HOH A 126 126 126 HOH TIP . E 5 HOH A 127 127 127 HOH TIP . E 5 HOH A 128 128 128 HOH TIP . E 5 HOH A 129 129 129 HOH TIP . E 5 HOH A 130 130 130 HOH TIP . E 5 HOH A 131 131 131 HOH TIP . E 5 HOH A 132 132 132 HOH TIP . E 5 HOH A 133 133 133 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 42.524 _atom_site.Cartn_y 11.09 _atom_site.Cartn_z 55.671 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #