data_1RL4 # _model_server_result.job_id k33FuPCGkJhZ_fZXQMji4Q _model_server_result.datetime_utc '2024-10-12 04:23:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rl4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1401}' # _entry.id 1RL4 # _exptl.entry_id 1RL4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.209 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1RL4 _cell.length_a 102.317 _cell.length_b 102.317 _cell.length_c 118.339 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RL4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 100 A CYS 156 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc2 A NE2 HIS 142 A HIS 198 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc3 A NE2 HIS 146 A HIS 202 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc4 C CO CO . A CO 301 1_555 D O4 BRR . A BRR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? metalc ? metalc5 C CO CO . A CO 301 1_555 D O1 BRR . A BRR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc6 B SG CYS 100 B CYS 156 1_555 F CO CO . B CO 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc7 B NE2 HIS 142 B HIS 198 1_555 F CO CO . B CO 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc8 B NE2 HIS 146 B HIS 202 1_555 F CO CO . B CO 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc9 F CO CO . B CO 1301 1_555 G O4 BRR . B BRR 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? metalc ? metalc10 F CO CO . B CO 1301 1_555 G O1 BRR . B BRR 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? # _chem_comp.formula 'C8 H15 N O4' _chem_comp.formula_weight 189.209 _chem_comp.id BRR _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C9 BRR sing 183 n n C10 H101 BRR sing 184 n n C10 H102 BRR sing 185 n n C10 H103 BRR sing 186 n n C9 C8 BRR sing 187 n n C9 H91 BRR sing 188 n n C9 H92 BRR sing 189 n n C8 C7 BRR sing 190 n n C8 H81 BRR sing 191 n n C8 H82 BRR sing 192 n n C7 C6 BRR sing 193 n n C7 H71 BRR sing 194 n n C7 H72 BRR sing 195 n n C6 C11 BRR sing 196 n n C6 C5 BRR sing 197 n n C6 H6 BRR sing 198 n n C11 O12 BRR doub 199 n n C11 O13 BRR sing 200 n n O13 H13 BRR sing 201 n n C5 N3 BRR sing 202 n n C5 H51 BRR sing 203 n n C5 H52 BRR sing 204 n n N3 C2 BRR sing 205 n n N3 O4 BRR sing 206 n n C2 O1 BRR doub 207 n n C2 H2 BRR sing 208 n n O4 HO4 BRR sing 209 n n # _atom_sites.entry_id 1RL4 _atom_sites.fract_transf_matrix[1][1] 0.009774 _atom_sites.fract_transf_matrix[1][2] 0.005643 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011286 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00845 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 301 301 CO CO . D 3 BRR A 1 401 401 BRR BRR . E 4 BL5 A 1 501 501 BL5 BL5 . F 2 CO B 1 1301 301 CO CO . G 3 BRR B 1 1401 401 BRR BRR . H 4 BL5 B 1 1501 501 BL5 BL5 . I 5 HOH A 1 701 701 HOH HOH . I 5 HOH A 2 702 702 HOH HOH . I 5 HOH A 3 703 703 HOH HOH . I 5 HOH A 4 704 704 HOH HOH . I 5 HOH A 5 705 705 HOH HOH . I 5 HOH A 6 706 706 HOH HOH . I 5 HOH A 7 707 707 HOH HOH . I 5 HOH A 8 708 708 HOH HOH . I 5 HOH A 9 709 709 HOH HOH . I 5 HOH A 10 710 710 HOH HOH . I 5 HOH A 11 711 711 HOH HOH . I 5 HOH A 12 712 712 HOH HOH . I 5 HOH A 13 713 713 HOH HOH . I 5 HOH A 14 714 714 HOH HOH . I 5 HOH A 15 715 715 HOH HOH . I 5 HOH A 16 716 716 HOH HOH . I 5 HOH A 17 717 717 HOH HOH . I 5 HOH A 18 718 718 HOH HOH . I 5 HOH A 19 719 719 HOH HOH . I 5 HOH A 20 720 720 HOH HOH . I 5 HOH A 21 721 721 HOH HOH . I 5 HOH A 22 722 722 HOH HOH . I 5 HOH A 23 724 724 HOH HOH . I 5 HOH A 24 725 725 HOH HOH . I 5 HOH A 25 726 726 HOH HOH . I 5 HOH A 26 727 727 HOH HOH . I 5 HOH A 27 728 728 HOH HOH . I 5 HOH A 28 729 729 HOH HOH . I 5 HOH A 29 730 730 HOH HOH . I 5 HOH A 30 731 731 HOH HOH . I 5 HOH A 31 732 732 HOH HOH . I 5 HOH A 32 733 733 HOH HOH . I 5 HOH A 33 734 734 HOH HOH . I 5 HOH A 34 735 735 HOH HOH . I 5 HOH A 35 736 736 HOH HOH . I 5 HOH A 36 737 737 HOH HOH . I 5 HOH A 37 738 738 HOH HOH . I 5 HOH A 38 739 739 HOH HOH . I 5 HOH A 39 740 740 HOH HOH . I 5 HOH A 40 741 741 HOH HOH . I 5 HOH A 41 742 742 HOH HOH . I 5 HOH A 42 743 743 HOH HOH . I 5 HOH A 43 744 744 HOH HOH . I 5 HOH A 44 745 745 HOH HOH . I 5 HOH A 45 746 746 HOH HOH . I 5 HOH A 46 747 747 HOH HOH . I 5 HOH A 47 748 748 HOH HOH . I 5 HOH A 48 749 749 HOH HOH . I 5 HOH A 49 750 750 HOH HOH . I 5 HOH A 50 751 751 HOH HOH . I 5 HOH A 51 752 752 HOH HOH . I 5 HOH A 52 753 753 HOH HOH . I 5 HOH A 53 801 801 HOH HOH . I 5 HOH A 54 802 802 HOH HOH . I 5 HOH A 55 803 803 HOH HOH . I 5 HOH A 56 804 804 HOH HOH . I 5 HOH A 57 805 805 HOH HOH . I 5 HOH A 58 806 806 HOH HOH . I 5 HOH A 59 807 807 HOH HOH . I 5 HOH A 60 808 808 HOH HOH . I 5 HOH A 61 809 809 HOH HOH . I 5 HOH A 62 810 810 HOH HOH . I 5 HOH A 63 811 811 HOH HOH . I 5 HOH A 64 812 812 HOH HOH . I 5 HOH A 65 813 813 HOH HOH . I 5 HOH A 66 814 814 HOH HOH . I 5 HOH A 67 815 815 HOH HOH . I 5 HOH A 68 816 816 HOH HOH . I 5 HOH A 69 817 817 HOH HOH . I 5 HOH A 70 818 818 HOH HOH . I 5 HOH A 71 825 825 HOH HOH . I 5 HOH A 72 1723 723 HOH HOH . J 5 HOH B 1 723 723 HOH HOH . J 5 HOH B 2 819 819 HOH HOH . J 5 HOH B 3 820 820 HOH HOH . J 5 HOH B 4 821 821 HOH HOH . J 5 HOH B 5 822 822 HOH HOH . J 5 HOH B 6 823 823 HOH HOH . J 5 HOH B 7 824 824 HOH HOH . J 5 HOH B 8 826 826 HOH HOH . J 5 HOH B 9 827 827 HOH HOH . J 5 HOH B 10 828 828 HOH HOH . J 5 HOH B 11 829 829 HOH HOH . J 5 HOH B 12 830 830 HOH HOH . J 5 HOH B 13 831 831 HOH HOH . J 5 HOH B 14 832 832 HOH HOH . J 5 HOH B 15 833 833 HOH HOH . J 5 HOH B 16 1701 701 HOH HOH . J 5 HOH B 17 1702 702 HOH HOH . J 5 HOH B 18 1703 703 HOH HOH . J 5 HOH B 19 1704 704 HOH HOH . J 5 HOH B 20 1705 705 HOH HOH . J 5 HOH B 21 1706 706 HOH HOH . J 5 HOH B 22 1707 707 HOH HOH . J 5 HOH B 23 1708 708 HOH HOH . J 5 HOH B 24 1709 709 HOH HOH . J 5 HOH B 25 1710 710 HOH HOH . J 5 HOH B 26 1711 711 HOH HOH . J 5 HOH B 27 1712 712 HOH HOH . J 5 HOH B 28 1713 713 HOH HOH . J 5 HOH B 29 1714 714 HOH HOH . J 5 HOH B 30 1715 715 HOH HOH . J 5 HOH B 31 1716 716 HOH HOH . J 5 HOH B 32 1717 717 HOH HOH . J 5 HOH B 33 1718 718 HOH HOH . J 5 HOH B 34 1719 719 HOH HOH . J 5 HOH B 35 1720 720 HOH HOH . J 5 HOH B 36 1721 721 HOH HOH . J 5 HOH B 37 1722 722 HOH HOH . J 5 HOH B 38 1724 724 HOH HOH . J 5 HOH B 39 1725 725 HOH HOH . J 5 HOH B 40 1726 726 HOH HOH . J 5 HOH B 41 1727 727 HOH HOH . J 5 HOH B 42 1728 728 HOH HOH . J 5 HOH B 43 1729 729 HOH HOH . J 5 HOH B 44 1730 730 HOH HOH . J 5 HOH B 45 1731 731 HOH HOH . J 5 HOH B 46 1732 732 HOH HOH . J 5 HOH B 47 1733 733 HOH HOH . J 5 HOH B 48 1734 734 HOH HOH . J 5 HOH B 49 1735 735 HOH HOH . J 5 HOH B 50 1736 736 HOH HOH . J 5 HOH B 51 1737 737 HOH HOH . J 5 HOH B 52 1738 738 HOH HOH . J 5 HOH B 53 1739 739 HOH HOH . J 5 HOH B 54 1740 740 HOH HOH . J 5 HOH B 55 1741 741 HOH HOH . J 5 HOH B 56 1742 742 HOH HOH . J 5 HOH B 57 1743 743 HOH HOH . J 5 HOH B 58 1744 744 HOH HOH . J 5 HOH B 59 1745 745 HOH HOH . J 5 HOH B 60 1746 746 HOH HOH . J 5 HOH B 61 1747 747 HOH HOH . J 5 HOH B 62 1748 748 HOH HOH . J 5 HOH B 63 1749 749 HOH HOH . J 5 HOH B 64 1750 750 HOH HOH . J 5 HOH B 65 1751 751 HOH HOH . J 5 HOH B 66 1752 752 HOH HOH . J 5 HOH B 67 1753 753 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 BRR . . . G 3 30.842 20.745 -16.831 1 43.38 ? C10 BRR 1401 B 1 HETATM 2 C C9 BRR . . . G 3 30.145 20.563 -18.178 1 46.61 ? C9 BRR 1401 B 1 HETATM 3 C C8 BRR . . . G 3 30.98 19.709 -19.145 1 49.95 ? C8 BRR 1401 B 1 HETATM 4 C C7 BRR . . . G 3 30.712 20.161 -20.584 1 40.04 ? C7 BRR 1401 B 1 HETATM 5 C C6 BRR . . . G 3 31.879 19.829 -21.524 1 41.82 ? C6 BRR 1401 B 1 HETATM 6 C C11 BRR . . . G 3 32.008 18.306 -21.684 1 43.64 ? C11 BRR 1401 B 1 HETATM 7 O O12 BRR . . . G 3 31.079 17.648 -22.155 1 39.79 ? O12 BRR 1401 B 1 HETATM 8 O O13 BRR . . . G 3 33.043 17.722 -21.358 1 50.21 ? O13 BRR 1401 B 1 HETATM 9 C C5 BRR . . . G 3 31.601 20.468 -22.898 1 30.5 ? C5 BRR 1401 B 1 HETATM 10 N N3 BRR . . . G 3 31.582 21.907 -22.739 1 31.79 ? N3 BRR 1401 B 1 HETATM 11 C C2 BRR . . . G 3 30.446 22.565 -22.608 1 29.2 ? C2 BRR 1401 B 1 HETATM 12 O O1 BRR . . . G 3 30.461 23.785 -22.442 1 31.16 ? O1 BRR 1401 B 1 HETATM 13 O O4 BRR . . . G 3 32.692 22.74 -22.624 1 31.26 ? O4 BRR 1401 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #