data_1RLJ # _model_server_result.job_id npExXvSJJw-0kqH9j1bW7A _model_server_result.datetime_utc '2024-11-26 18:53:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rlj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":151}' # _entry.id 1RLJ # _exptl.entry_id 1RLJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1RLJ _cell.length_a 85.236 _cell.length_b 85.236 _cell.length_c 59.992 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RLJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 70 n n N1 C10 FMN doub 71 n n C2 O2 FMN doub 72 n n C2 N3 FMN sing 73 n n N3 C4 FMN sing 74 n n N3 HN3 FMN sing 75 n n C4 O4 FMN doub 76 n n C4 C4A FMN sing 77 n n C4A N5 FMN doub 78 n n C4A C10 FMN sing 79 n n N5 C5A FMN sing 80 n n C5A C6 FMN doub 81 n y C5A C9A FMN sing 82 n y C6 C7 FMN sing 83 n y C6 H6 FMN sing 84 n n C7 C7M FMN sing 85 n n C7 C8 FMN doub 86 n y C7M HM71 FMN sing 87 n n C7M HM72 FMN sing 88 n n C7M HM73 FMN sing 89 n n C8 C8M FMN sing 90 n n C8 C9 FMN sing 91 n y C8M HM81 FMN sing 92 n n C8M HM82 FMN sing 93 n n C8M HM83 FMN sing 94 n n C9 C9A FMN doub 95 n y C9 H9 FMN sing 96 n n C9A N10 FMN sing 97 n n N10 C10 FMN sing 98 n n N10 C1' FMN sing 99 n n C1' C2' FMN sing 100 n n C1' "H1'1" FMN sing 101 n n C1' "H1'2" FMN sing 102 n n C2' O2' FMN sing 103 n n C2' C3' FMN sing 104 n n C2' H2' FMN sing 105 n n O2' HO2' FMN sing 106 n n C3' O3' FMN sing 107 n n C3' C4' FMN sing 108 n n C3' H3' FMN sing 109 n n O3' HO3' FMN sing 110 n n C4' O4' FMN sing 111 n n C4' C5' FMN sing 112 n n C4' H4' FMN sing 113 n n O4' HO4' FMN sing 114 n n C5' O5' FMN sing 115 n n C5' "H5'1" FMN sing 116 n n C5' "H5'2" FMN sing 117 n n O5' P FMN sing 118 n n P O1P FMN doub 119 n n P O2P FMN sing 120 n n P O3P FMN sing 121 n n O2P HOP2 FMN sing 122 n n O3P HOP3 FMN sing 123 n n # _atom_sites.entry_id 1RLJ _atom_sites.fract_transf_matrix[1][1] 0.011732 _atom_sites.fract_transf_matrix[1][2] 0.006774 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013547 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016669 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 152 152 IOD I . C 2 IOD A 1 153 153 IOD I . D 3 FMN A 1 151 151 FMN FMN . E 4 HOH A 1 201 201 HOH TIP . E 4 HOH A 2 202 202 HOH TIP . E 4 HOH A 3 203 203 HOH TIP . E 4 HOH A 4 204 204 HOH TIP . E 4 HOH A 5 205 205 HOH TIP . E 4 HOH A 6 206 206 HOH TIP . E 4 HOH A 7 207 207 HOH TIP . E 4 HOH A 8 208 208 HOH TIP . E 4 HOH A 9 209 209 HOH TIP . E 4 HOH A 10 210 210 HOH TIP . E 4 HOH A 11 211 211 HOH TIP . E 4 HOH A 12 212 212 HOH TIP . E 4 HOH A 13 213 213 HOH TIP . E 4 HOH A 14 214 214 HOH TIP . E 4 HOH A 15 215 215 HOH TIP . E 4 HOH A 16 216 216 HOH TIP . E 4 HOH A 17 217 217 HOH TIP . E 4 HOH A 18 218 218 HOH TIP . E 4 HOH A 19 219 219 HOH TIP . E 4 HOH A 20 220 220 HOH TIP . E 4 HOH A 21 221 221 HOH TIP . E 4 HOH A 22 222 222 HOH TIP . E 4 HOH A 23 223 223 HOH TIP . E 4 HOH A 24 224 224 HOH TIP . E 4 HOH A 25 225 225 HOH TIP . E 4 HOH A 26 226 226 HOH TIP . E 4 HOH A 27 227 227 HOH TIP . E 4 HOH A 28 228 228 HOH TIP . E 4 HOH A 29 229 229 HOH TIP . E 4 HOH A 30 230 230 HOH TIP . E 4 HOH A 31 231 231 HOH TIP . E 4 HOH A 32 232 232 HOH TIP . E 4 HOH A 33 233 233 HOH TIP . E 4 HOH A 34 234 234 HOH TIP . E 4 HOH A 35 235 235 HOH TIP . E 4 HOH A 36 236 236 HOH TIP . E 4 HOH A 37 237 237 HOH TIP . E 4 HOH A 38 238 238 HOH TIP . E 4 HOH A 39 239 239 HOH TIP . E 4 HOH A 40 240 240 HOH TIP . E 4 HOH A 41 241 241 HOH TIP . E 4 HOH A 42 242 242 HOH TIP . E 4 HOH A 43 243 243 HOH TIP . E 4 HOH A 44 244 244 HOH TIP . E 4 HOH A 45 245 245 HOH TIP . E 4 HOH A 46 246 246 HOH TIP . E 4 HOH A 47 247 247 HOH TIP . E 4 HOH A 48 248 248 HOH TIP . E 4 HOH A 49 249 249 HOH TIP . E 4 HOH A 50 250 250 HOH TIP . E 4 HOH A 51 251 251 HOH TIP . E 4 HOH A 52 252 252 HOH TIP . E 4 HOH A 53 253 253 HOH TIP . E 4 HOH A 54 254 254 HOH TIP . E 4 HOH A 55 255 255 HOH TIP . E 4 HOH A 56 256 256 HOH TIP . E 4 HOH A 57 257 257 HOH TIP . E 4 HOH A 58 258 258 HOH TIP . E 4 HOH A 59 259 259 HOH TIP . E 4 HOH A 60 260 260 HOH TIP . E 4 HOH A 61 261 261 HOH TIP . E 4 HOH A 62 262 262 HOH TIP . E 4 HOH A 63 263 263 HOH TIP . E 4 HOH A 64 264 264 HOH TIP . E 4 HOH A 65 265 265 HOH TIP . E 4 HOH A 66 266 266 HOH TIP . E 4 HOH A 67 267 267 HOH TIP . E 4 HOH A 68 268 268 HOH TIP . E 4 HOH A 69 269 269 HOH TIP . E 4 HOH A 70 270 270 HOH TIP . E 4 HOH A 71 271 271 HOH TIP . E 4 HOH A 72 272 272 HOH TIP . E 4 HOH A 73 273 273 HOH TIP . E 4 HOH A 74 274 274 HOH TIP . E 4 HOH A 75 275 275 HOH TIP . E 4 HOH A 76 276 276 HOH TIP . E 4 HOH A 77 277 277 HOH TIP . E 4 HOH A 78 278 278 HOH TIP . E 4 HOH A 79 279 279 HOH TIP . E 4 HOH A 80 280 280 HOH TIP . E 4 HOH A 81 281 281 HOH TIP . E 4 HOH A 82 282 282 HOH TIP . E 4 HOH A 83 283 283 HOH TIP . E 4 HOH A 84 284 284 HOH TIP . E 4 HOH A 85 285 285 HOH TIP . E 4 HOH A 86 286 286 HOH TIP . E 4 HOH A 87 287 287 HOH TIP . E 4 HOH A 88 288 288 HOH TIP . E 4 HOH A 89 289 289 HOH TIP . E 4 HOH A 90 290 290 HOH TIP . E 4 HOH A 91 291 291 HOH TIP . E 4 HOH A 92 292 292 HOH TIP . E 4 HOH A 93 293 293 HOH TIP . E 4 HOH A 94 294 294 HOH TIP . E 4 HOH A 95 295 295 HOH TIP . E 4 HOH A 96 296 296 HOH TIP . E 4 HOH A 97 297 297 HOH TIP . E 4 HOH A 98 298 298 HOH TIP . E 4 HOH A 99 299 299 HOH TIP . E 4 HOH A 100 300 300 HOH TIP . E 4 HOH A 101 301 301 HOH TIP . E 4 HOH A 102 302 302 HOH TIP . E 4 HOH A 103 303 303 HOH TIP . E 4 HOH A 104 304 304 HOH TIP . E 4 HOH A 105 305 305 HOH TIP . E 4 HOH A 106 306 306 HOH TIP . E 4 HOH A 107 307 307 HOH TIP . E 4 HOH A 108 308 308 HOH TIP . E 4 HOH A 109 309 309 HOH TIP . E 4 HOH A 110 310 310 HOH TIP . E 4 HOH A 111 311 311 HOH TIP . E 4 HOH A 112 312 312 HOH TIP . E 4 HOH A 113 313 313 HOH TIP . E 4 HOH A 114 314 314 HOH TIP . E 4 HOH A 115 315 315 HOH TIP . E 4 HOH A 116 316 316 HOH TIP . E 4 HOH A 117 317 317 HOH TIP . E 4 HOH A 118 318 318 HOH TIP . E 4 HOH A 119 319 319 HOH TIP . E 4 HOH A 120 320 320 HOH TIP . E 4 HOH A 121 321 321 HOH TIP . E 4 HOH A 122 322 322 HOH TIP . E 4 HOH A 123 323 323 HOH TIP . E 4 HOH A 124 324 324 HOH TIP . E 4 HOH A 125 325 325 HOH TIP . E 4 HOH A 126 326 326 HOH TIP . E 4 HOH A 127 327 327 HOH TIP . E 4 HOH A 128 328 328 HOH TIP . E 4 HOH A 129 329 329 HOH TIP . E 4 HOH A 130 330 330 HOH TIP . E 4 HOH A 131 331 331 HOH TIP . E 4 HOH A 132 332 332 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . D 3 28.017 23.969 26.3 1 11.85 ? N1 FMN 151 A 1 HETATM 2 C C2 FMN . . . D 3 27.375 22.968 26.968 1 11.4 ? C2 FMN 151 A 1 HETATM 3 O O2 FMN . . . D 3 27.945 21.959 27.346 1 12.26 ? O2 FMN 151 A 1 HETATM 4 N N3 FMN . . . D 3 26.001 23.177 27.196 1 10.48 ? N3 FMN 151 A 1 HETATM 5 C C4 FMN . . . D 3 25.214 24.313 26.81 1 12.37 ? C4 FMN 151 A 1 HETATM 6 O O4 FMN . . . D 3 24.016 24.352 27.084 1 13.68 ? O4 FMN 151 A 1 HETATM 7 C C4A FMN . . . D 3 25.93 25.313 26.129 1 11.88 ? C4A FMN 151 A 1 HETATM 8 N N5 FMN . . . D 3 25.422 26.506 25.654 1 11.22 ? N5 FMN 151 A 1 HETATM 9 C C5A FMN . . . D 3 26.041 27.561 24.977 1 12.1 ? C5A FMN 151 A 1 HETATM 10 C C6 FMN . . . D 3 25.285 28.753 24.568 1 10.61 ? C6 FMN 151 A 1 HETATM 11 C C7 FMN . . . D 3 25.987 29.83 23.859 1 10.39 ? C7 FMN 151 A 1 HETATM 12 C C7M FMN . . . D 3 25.152 31.046 23.455 1 10.14 ? C7M FMN 151 A 1 HETATM 13 C C8 FMN . . . D 3 27.44 29.691 23.572 1 10.56 ? C8 FMN 151 A 1 HETATM 14 C C8M FMN . . . D 3 28.316 30.748 22.827 1 10.3 ? C8M FMN 151 A 1 HETATM 15 C C9 FMN . . . D 3 28.124 28.485 24.008 1 11.89 ? C9 FMN 151 A 1 HETATM 16 C C9A FMN . . . D 3 27.435 27.406 24.715 1 11.56 ? C9A FMN 151 A 1 HETATM 17 N N10 FMN . . . D 3 28.005 26.179 25.188 1 11.84 ? N10 FMN 151 A 1 HETATM 18 C C10 FMN . . . D 3 27.346 25.102 25.89 1 11.96 ? C10 FMN 151 A 1 HETATM 19 C C1' FMN . . . D 3 29.486 25.92 24.943 1 10.49 ? C1' FMN 151 A 1 HETATM 20 C C2' FMN . . . D 3 29.753 25.317 23.543 1 11.26 ? C2' FMN 151 A 1 HETATM 21 O O2' FMN . . . D 3 28.964 24.161 23.287 1 11.95 ? O2' FMN 151 A 1 HETATM 22 C C3' FMN . . . D 3 31.246 24.998 23.404 1 12.38 ? C3' FMN 151 A 1 HETATM 23 O O3' FMN . . . D 3 32.049 26.167 23.638 1 11.32 ? O3' FMN 151 A 1 HETATM 24 C C4' FMN . . . D 3 31.518 24.361 22.011 1 12.29 ? C4' FMN 151 A 1 HETATM 25 O O4' FMN . . . D 3 32.834 23.79 22.042 1 10.05 ? O4' FMN 151 A 1 HETATM 26 C C5' FMN . . . D 3 31.619 25.339 20.944 1 13.69 ? C5' FMN 151 A 1 HETATM 27 O O5' FMN . . . D 3 31.845 24.746 19.713 1 15.66 ? O5' FMN 151 A 1 HETATM 28 P P FMN . . . D 3 32.029 25.735 18.554 1 19.67 ? P FMN 151 A 1 HETATM 29 O O1P FMN . . . D 3 33.358 26.134 18.12 1 21.15 ? O1P FMN 151 A 1 HETATM 30 O O2P FMN . . . D 3 30.825 25.957 17.725 1 19.59 ? O2P FMN 151 A 1 HETATM 31 O O3P FMN . . . D 3 32.17 24.478 17.822 1 15.57 ? O3P FMN 151 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #