data_1RMD
#
_model_server_result.job_id            EvXtvCzd0YHTeYmGP5P-nQ 
_model_server_result.datetime_utc      '2024-12-26 21:48:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1rmd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":120}' 
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_entry.id    1RMD 
#
_exptl.entry_id    1RMD 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1RMD 
_cell.length_a            57.58 
_cell.length_b            57.58 
_cell.length_c            98.43 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1RMD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
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_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_555 -x,-x+y,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 65.62 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 2 A CYS 2 1_555 B ZN ZN . A ZN 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc2 A ND1 HIS 6 A HIS 6 1_555 B ZN ZN . A ZN 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.866 ? 
metalc ? metalc3 A SG CYS 26 A CYS 26 1_555 C ZN ZN . A ZN 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc4 A SG CYS 29 A CYS 29 1_555 B ZN ZN . A ZN 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc5 A SG CYS 29 A CYS 29 1_555 C ZN ZN . A ZN 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc6 A ND1 HIS 31 A HIS 31 1_555 B ZN ZN . A ZN 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc7 A SG CYS 41 A CYS 41 1_555 D ZN ZN . A ZN 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? 
metalc ? metalc8 A ND1 HIS 43 A HIS 43 1_555 D ZN ZN . A ZN 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc9 A SG CYS 46 A CYS 46 1_555 C ZN ZN . A ZN 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc10 A SG CYS 49 A CYS 49 1_555 C ZN ZN . A ZN 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc11 A SG CYS 61 A CYS 61 1_555 D ZN ZN . A ZN 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? 
metalc ? metalc12 A SG CYS 64 A CYS 64 1_555 D ZN ZN . A ZN 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? 
metalc ? metalc13 A SG CYS 91 A CYS 91 1_555 E ZN ZN . A ZN 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc14 A SG CYS 96 A CYS 96 1_555 E ZN ZN . A ZN 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? 
metalc ? metalc15 A NE2 HIS 108 A HIS 108 1_555 E ZN ZN . A ZN 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? 
metalc ? metalc16 A NE2 HIS 112 A HIS 112 1_555 E ZN ZN . A ZN 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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_atom_sites.entry_id                     1RMD 
_atom_sites.fract_transf_matrix[1][1]    0.017367 
_atom_sites.fract_transf_matrix[1][2]    0.010027 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020054 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01016 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 117 117 ZN ZN . 
C 2 ZN A 1 118 118 ZN ZN . 
D 2 ZN A 1 119 119 ZN ZN . 
E 2 ZN A 1 120 120 ZN ZN . 
F 3 HOH A 1 200 200 HOH HOH . 
F 3 HOH A 2 201 201 HOH HOH . 
F 3 HOH A 3 202 202 HOH HOH . 
F 3 HOH A 4 203 203 HOH HOH . 
F 3 HOH A 5 204 204 HOH HOH . 
F 3 HOH A 6 205 205 HOH HOH . 
F 3 HOH A 7 206 206 HOH HOH . 
F 3 HOH A 8 207 207 HOH HOH . 
F 3 HOH A 9 209 209 HOH HOH . 
F 3 HOH A 10 210 210 HOH HOH . 
F 3 HOH A 11 211 211 HOH HOH . 
F 3 HOH A 12 212 212 HOH HOH . 
F 3 HOH A 13 213 213 HOH HOH . 
F 3 HOH A 14 214 214 HOH HOH . 
F 3 HOH A 15 215 215 HOH HOH . 
F 3 HOH A 16 216 216 HOH HOH . 
F 3 HOH A 17 217 217 HOH HOH . 
F 3 HOH A 18 218 218 HOH HOH . 
F 3 HOH A 19 219 219 HOH HOH . 
F 3 HOH A 20 220 220 HOH HOH . 
F 3 HOH A 21 221 221 HOH HOH . 
F 3 HOH A 22 222 222 HOH HOH . 
F 3 HOH A 23 223 223 HOH HOH . 
F 3 HOH A 24 224 224 HOH HOH . 
F 3 HOH A 25 226 226 HOH HOH . 
F 3 HOH A 26 227 227 HOH HOH . 
F 3 HOH A 27 228 228 HOH HOH . 
F 3 HOH A 28 229 229 HOH HOH . 
F 3 HOH A 29 230 230 HOH HOH . 
F 3 HOH A 30 231 231 HOH HOH . 
F 3 HOH A 31 232 232 HOH HOH . 
F 3 HOH A 32 233 233 HOH HOH . 
F 3 HOH A 33 234 234 HOH HOH . 
F 3 HOH A 34 235 235 HOH HOH . 
F 3 HOH A 35 236 236 HOH HOH . 
F 3 HOH A 36 237 237 HOH HOH . 
F 3 HOH A 37 238 238 HOH HOH . 
F 3 HOH A 38 239 239 HOH HOH . 
F 3 HOH A 39 240 240 HOH HOH . 
F 3 HOH A 40 241 241 HOH HOH . 
F 3 HOH A 41 242 242 HOH HOH . 
F 3 HOH A 42 244 244 HOH HOH . 
F 3 HOH A 43 245 245 HOH HOH . 
F 3 HOH A 44 246 246 HOH HOH . 
F 3 HOH A 45 247 247 HOH HOH . 
F 3 HOH A 46 248 248 HOH HOH . 
F 3 HOH A 47 249 249 HOH HOH . 
F 3 HOH A 48 250 250 HOH HOH . 
F 3 HOH A 49 251 251 HOH HOH . 
F 3 HOH A 50 252 252 HOH HOH . 
F 3 HOH A 51 253 253 HOH HOH . 
F 3 HOH A 52 254 254 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -18.665 
_atom_site.Cartn_y               39.074 
_atom_site.Cartn_z               55.936 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        34.77 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           120 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#