data_1RP4
#
_model_server_result.job_id            S-dXKRmGRjuxcd_XJNiOAQ 
_model_server_result.datetime_utc      '2024-11-06 08:39:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1rp4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":802}' 
#
_entry.id    1RP4 
#
_exptl.entry_id    1RP4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              112.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CADMIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1RP4 
_cell.length_a            73.47 
_cell.length_b            134.33 
_cell.length_c            102.68 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1RP4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 52 A CYS 90 1_555 A SG CYS 311 A CYS 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf2 A SG CYS 62 A CYS 100 1_555 A SG CYS 67 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 A SG CYS 105 A CYS 143 1_555 A SG CYS 128 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf4 A SG CYS 112 A CYS 150 1_555 A SG CYS 257 A CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf5 A SG CYS 314 A CYS 352 1_555 A SG CYS 317 A CYS 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
covale ? covale1 A SG CYS 170 A CYS 208 1_555 D C1 NEN . A NEN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.822 ? 
covale ? covale2 A C THR 94 A THR 132 1_555 A N MSE 95 A MSE 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale3 A C MSE 95 A MSE 133 1_555 A N LYS 96 A LYS 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale4 A C PHE 219 A PHE 257 1_555 A N MSE 220 A MSE 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale5 A C MSE 220 A MSE 258 1_555 A N ALA 221 A ALA 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale6 A C ASN 232 A ASN 270 1_555 A N MSE 233 A MSE 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale7 A C MSE 233 A MSE 271 1_555 A N TYR 234 A TYR 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale8 A C LYS 267 A LYS 305 1_555 A N MSE 268 A MSE 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale9 A C MSE 268 A MSE 306 1_555 A N ASP 269 A ASP 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale10 A C ILE 308 A ILE 346 1_555 A N MSE 309 A MSE 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale11 A C MSE 309 A MSE 347 1_555 A N ASP 310 A ASP 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale12 A C ASN 376 A ASN 414 1_555 A N MSE 377 A MSE 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale13 A C MSE 377 A MSE 415 1_555 A N PHE 378 A PHE 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale14 A C LYS 380 A LYS 418 1_555 A N MSE 381 A MSE 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale15 A C MSE 381 A MSE 419 1_555 A N TYR 382 A TYR 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
metalc ? metalc1 B CD CD . A CD 801 1_555 A ND1 HIS 348 A HIS 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc2 B CD CD . A CD 801 1_555 F O HOH . A HOH 832 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? 
metalc ? metalc3 C CD CD . A CD 802 1_555 A OE2 GLU 370 A GLU 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? 
metalc ? metalc4 C CD CD . A CD 802 1_555 F O HOH . A HOH 886 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.989 ? 
metalc ? metalc5 B CD CD . A CD 801 1_555 A OE1 GLU 26 A GLU 64 8_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc6 B CD CD . A CD 801 1_555 A OE2 GLU 26 A GLU 64 8_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.794 ? 
metalc ? metalc7 B CD CD . A CD 801 1_555 A OE2 GLU 373 A GLU 411 8_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc8 B CD CD . A CD 801 1_555 A OE1 GLU 373 A GLU 411 8_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? 
#
_chem_comp.formula           'Cd 2' 
_chem_comp.formula_weight    112.411 
_chem_comp.id                CD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CADMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1RP4 
_atom_sites.fract_transf_matrix[1][1]    0.013611 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007444 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009739 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CD A 1 801 801 CD CD . 
C 2 CD A 1 802 802 CD CD . 
D 3 NEN A 1 501 501 NEN NEM . 
E 4 FAD A 1 634 634 FAD FAD . 
F 5 HOH A 1 803 1 HOH TIP . 
F 5 HOH A 2 804 2 HOH TIP . 
F 5 HOH A 3 805 3 HOH TIP . 
F 5 HOH A 4 806 4 HOH TIP . 
F 5 HOH A 5 807 5 HOH TIP . 
F 5 HOH A 6 808 6 HOH TIP . 
F 5 HOH A 7 809 7 HOH TIP . 
F 5 HOH A 8 810 8 HOH TIP . 
F 5 HOH A 9 811 9 HOH TIP . 
F 5 HOH A 10 812 10 HOH TIP . 
F 5 HOH A 11 813 11 HOH TIP . 
F 5 HOH A 12 814 12 HOH TIP . 
F 5 HOH A 13 815 13 HOH TIP . 
F 5 HOH A 14 816 14 HOH TIP . 
F 5 HOH A 15 817 15 HOH TIP . 
F 5 HOH A 16 818 16 HOH TIP . 
F 5 HOH A 17 819 17 HOH TIP . 
F 5 HOH A 18 820 18 HOH TIP . 
F 5 HOH A 19 821 19 HOH TIP . 
F 5 HOH A 20 822 20 HOH TIP . 
F 5 HOH A 21 823 21 HOH TIP . 
F 5 HOH A 22 824 22 HOH TIP . 
F 5 HOH A 23 825 23 HOH TIP . 
F 5 HOH A 24 826 24 HOH TIP . 
F 5 HOH A 25 827 25 HOH TIP . 
F 5 HOH A 26 828 26 HOH TIP . 
F 5 HOH A 27 829 27 HOH TIP . 
F 5 HOH A 28 830 28 HOH TIP . 
F 5 HOH A 29 831 29 HOH TIP . 
F 5 HOH A 30 832 30 HOH TIP . 
F 5 HOH A 31 833 31 HOH TIP . 
F 5 HOH A 32 834 32 HOH TIP . 
F 5 HOH A 33 835 33 HOH TIP . 
F 5 HOH A 34 836 34 HOH TIP . 
F 5 HOH A 35 837 35 HOH TIP . 
F 5 HOH A 36 838 36 HOH TIP . 
F 5 HOH A 37 839 37 HOH TIP . 
F 5 HOH A 38 840 38 HOH TIP . 
F 5 HOH A 39 841 39 HOH TIP . 
F 5 HOH A 40 842 40 HOH TIP . 
F 5 HOH A 41 843 41 HOH TIP . 
F 5 HOH A 42 844 42 HOH TIP . 
F 5 HOH A 43 845 43 HOH TIP . 
F 5 HOH A 44 846 44 HOH TIP . 
F 5 HOH A 45 847 45 HOH TIP . 
F 5 HOH A 46 848 46 HOH TIP . 
F 5 HOH A 47 849 47 HOH TIP . 
F 5 HOH A 48 850 48 HOH TIP . 
F 5 HOH A 49 851 49 HOH TIP . 
F 5 HOH A 50 852 50 HOH TIP . 
F 5 HOH A 51 853 51 HOH TIP . 
F 5 HOH A 52 854 52 HOH TIP . 
F 5 HOH A 53 855 53 HOH TIP . 
F 5 HOH A 54 856 54 HOH TIP . 
F 5 HOH A 55 857 55 HOH TIP . 
F 5 HOH A 56 858 56 HOH TIP . 
F 5 HOH A 57 859 57 HOH TIP . 
F 5 HOH A 58 860 58 HOH TIP . 
F 5 HOH A 59 861 59 HOH TIP . 
F 5 HOH A 60 862 60 HOH TIP . 
F 5 HOH A 61 863 61 HOH TIP . 
F 5 HOH A 62 864 62 HOH TIP . 
F 5 HOH A 63 865 63 HOH TIP . 
F 5 HOH A 64 866 64 HOH TIP . 
F 5 HOH A 65 867 65 HOH TIP . 
F 5 HOH A 66 868 66 HOH TIP . 
F 5 HOH A 67 869 67 HOH TIP . 
F 5 HOH A 68 870 68 HOH TIP . 
F 5 HOH A 69 871 69 HOH TIP . 
F 5 HOH A 70 872 70 HOH TIP . 
F 5 HOH A 71 873 71 HOH TIP . 
F 5 HOH A 72 874 72 HOH TIP . 
F 5 HOH A 73 875 73 HOH TIP . 
F 5 HOH A 74 876 74 HOH TIP . 
F 5 HOH A 75 877 75 HOH TIP . 
F 5 HOH A 76 878 76 HOH TIP . 
F 5 HOH A 77 879 77 HOH TIP . 
F 5 HOH A 78 880 78 HOH TIP . 
F 5 HOH A 79 881 79 HOH TIP . 
F 5 HOH A 80 882 80 HOH TIP . 
F 5 HOH A 81 883 81 HOH TIP . 
F 5 HOH A 82 884 82 HOH TIP . 
F 5 HOH A 83 885 83 HOH TIP . 
F 5 HOH A 84 886 84 HOH TIP . 
F 5 HOH A 85 887 85 HOH TIP . 
F 5 HOH A 86 888 86 HOH TIP . 
F 5 HOH A 87 889 87 HOH TIP . 
F 5 HOH A 88 890 88 HOH TIP . 
F 5 HOH A 89 891 89 HOH TIP . 
F 5 HOH A 90 892 90 HOH TIP . 
F 5 HOH A 91 893 91 HOH TIP . 
F 5 HOH A 92 894 92 HOH TIP . 
F 5 HOH A 93 895 93 HOH TIP . 
F 5 HOH A 94 896 94 HOH TIP . 
F 5 HOH A 95 897 95 HOH TIP . 
F 5 HOH A 96 898 96 HOH TIP . 
F 5 HOH A 97 899 97 HOH TIP . 
F 5 HOH A 98 900 98 HOH TIP . 
F 5 HOH A 99 901 99 HOH TIP . 
F 5 HOH A 100 902 100 HOH TIP . 
F 5 HOH A 101 903 101 HOH TIP . 
F 5 HOH A 102 904 102 HOH TIP . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CD 
_atom_site.label_atom_id         CD 
_atom_site.label_comp_id         CD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               43.916 
_atom_site.Cartn_y               48.472 
_atom_site.Cartn_z               3.14 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        89.56 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CD 
_atom_site.auth_comp_id          CD 
_atom_site.auth_seq_id           802 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#