data_1RPY # _model_server_result.job_id -WoDm2UaGTtxt8Si9jtA9g _model_server_result.datetime_utc '2024-11-25 16:01:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rpy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 1RPY # _exptl.entry_id 1RPY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1RPY _cell.length_a 78.378 _cell.length_b 78.378 _cell.length_c 67.33 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RPY _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_554 x-y,-y,-z-1/3 1 0 0 0 -1 0 0 0 -1 0 0 -22.443333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 85 A ASP 481 1_555 A N MSE 86 A MSE 482 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C MSE 86 A MSE 482 1_555 A N LEU 87 A LEU 483 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 B C ASP 85 B ASP 481 1_555 B N MSE 86 B MSE 482 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 B C MSE 86 B MSE 482 1_555 B N LEU 87 B LEU 483 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 309 n n S O2 SO4 doub 310 n n S O3 SO4 sing 311 n n S O4 SO4 sing 312 n n # _atom_sites.entry_id 1RPY _atom_sites.fract_transf_matrix[1][1] 0.012759 _atom_sites.fract_transf_matrix[1][2] 0.007366 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014732 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014852 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 102 102 SO4 SO4 . D 2 SO4 B 1 101 101 SO4 SO4 . E 3 HOH A 1 1 1 HOH WAT . E 3 HOH A 2 3 3 HOH WAT . E 3 HOH A 3 4 4 HOH WAT . E 3 HOH A 4 5 5 HOH WAT . E 3 HOH A 5 6 6 HOH WAT . E 3 HOH A 6 7 7 HOH WAT . E 3 HOH A 7 8 8 HOH WAT . E 3 HOH A 8 9 9 HOH WAT . E 3 HOH A 9 12 12 HOH WAT . E 3 HOH A 10 13 13 HOH WAT . E 3 HOH A 11 14 14 HOH WAT . E 3 HOH A 12 16 16 HOH WAT . E 3 HOH A 13 17 17 HOH WAT . E 3 HOH A 14 20 20 HOH WAT . E 3 HOH A 15 21 21 HOH WAT . E 3 HOH A 16 22 22 HOH WAT . E 3 HOH A 17 23 23 HOH WAT . E 3 HOH A 18 25 25 HOH WAT . E 3 HOH A 19 28 28 HOH WAT . E 3 HOH A 20 29 29 HOH WAT . F 3 HOH B 1 2 2 HOH WAT . F 3 HOH B 2 10 10 HOH WAT . F 3 HOH B 3 11 11 HOH WAT . F 3 HOH B 4 15 15 HOH WAT . F 3 HOH B 5 18 18 HOH WAT . F 3 HOH B 6 19 19 HOH WAT . F 3 HOH B 7 24 24 HOH WAT . F 3 HOH B 8 26 26 HOH WAT . F 3 HOH B 9 27 27 HOH WAT . F 3 HOH B 10 30 30 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 2 39.722 21.398 13.68 1 29.35 ? S SO4 102 A 1 HETATM 2 O O1 SO4 . . . C 2 40.374 20.307 14.41 1 31.37 ? O1 SO4 102 A 1 HETATM 3 O O2 SO4 . . . C 2 40.555 21.823 12.534 1 29.43 ? O2 SO4 102 A 1 HETATM 4 O O3 SO4 . . . C 2 39.55 22.55 14.585 1 33.06 ? O3 SO4 102 A 1 HETATM 5 O O4 SO4 . . . C 2 38.408 20.93 13.208 1 29.94 ? O4 SO4 102 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 569 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #