data_1RQQ # _model_server_result.job_id RQYc56zMjdUktxIhrISlkg _model_server_result.datetime_utc '2024-11-22 06:05:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rqq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":201}' # _entry.id 1RQQ # _exptl.entry_id 1RQQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1RQQ _cell.length_a 87.216 _cell.length_b 96.443 _cell.length_c 121.993 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RQQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 180 A ILE 1157 1_555 A N PTR 181 A PTR 1158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C PTR 181 A PTR 1158 1_555 A N GLU 182 A GLU 1159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C ASP 184 A ASP 1161 1_555 A N PTR 185 A PTR 1162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C PTR 185 A PTR 1162 1_555 A N PTR 186 A PTR 1163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale5 A C PTR 186 A PTR 1163 1_555 A N ARG 187 A ARG 1164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 B C ILE 180 B ILE 1157 1_555 B N PTR 181 B PTR 1158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 B C PTR 181 B PTR 1158 1_555 B N GLU 182 B GLU 1159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 B C ASP 184 B ASP 1161 1_555 B N PTR 185 B PTR 1162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 B C PTR 185 B PTR 1162 1_555 B N PTR 186 B PTR 1163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 B C PTR 186 B PTR 1163 1_555 B N ARG 187 B ARG 1164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale11 E CZ PHE 10 E PHE 108 1_555 I NS 112 . E 112 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.46 ? covale ? covale12 F CZ PHE 10 F PHE 108 1_555 J NS 112 . F 112 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? metalc ? metalc1 K O HOH . A HOH 63 1_555 G MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? metalc ? metalc2 G MN MN . A MN 201 1_555 A OD1 ASN 160 A ASN 1137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc3 G MN MN . A MN 201 1_555 A OD2 ASP 173 A ASP 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc4 G MN MN . A MN 201 1_555 I O2S 112 . E 112 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc5 G MN MN . A MN 201 1_555 I O2G 112 . E 112 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc6 G MN MN . A MN 201 1_555 I O2B 112 . E 112 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc7 H MN MN . B MN 202 1_555 B OD1 ASN 160 B ASN 1137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc8 H MN MN . B MN 202 1_555 B OD2 ASP 173 B ASP 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc9 H MN MN . B MN 202 1_555 P O HOH . F HOH 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc10 H MN MN . B MN 202 1_555 J O2G 112 . F 112 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc11 H MN MN . B MN 202 1_555 J O2S 112 . F 112 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc12 H MN MN . B MN 202 1_555 J O2B 112 . F 112 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1RQQ _atom_sites.fract_transf_matrix[1][1] 0.011466 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010369 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008197 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 MN A 1 201 201 MN MN . H 4 MN B 1 202 202 MN MN . I 5 112 E 1 117 101 112 112 . J 5 112 F 1 117 101 112 112 . K 6 HOH A 1 1 1 HOH HOH . K 6 HOH A 2 2 2 HOH HOH . K 6 HOH A 3 3 3 HOH HOH . K 6 HOH A 4 5 5 HOH HOH . K 6 HOH A 5 8 8 HOH HOH . K 6 HOH A 6 14 14 HOH HOH . K 6 HOH A 7 15 15 HOH HOH . K 6 HOH A 8 17 17 HOH HOH . K 6 HOH A 9 18 18 HOH HOH . K 6 HOH A 10 21 21 HOH HOH . K 6 HOH A 11 22 22 HOH HOH . K 6 HOH A 12 25 25 HOH HOH . K 6 HOH A 13 27 27 HOH HOH . K 6 HOH A 14 28 28 HOH HOH . K 6 HOH A 15 30 30 HOH HOH . K 6 HOH A 16 33 33 HOH HOH . K 6 HOH A 17 39 39 HOH HOH . K 6 HOH A 18 41 41 HOH HOH . K 6 HOH A 19 42 42 HOH HOH . K 6 HOH A 20 43 43 HOH HOH . K 6 HOH A 21 44 44 HOH HOH . K 6 HOH A 22 46 46 HOH HOH . K 6 HOH A 23 47 47 HOH HOH . K 6 HOH A 24 48 48 HOH HOH . K 6 HOH A 25 51 51 HOH HOH . K 6 HOH A 26 52 52 HOH HOH . K 6 HOH A 27 53 53 HOH HOH . K 6 HOH A 28 54 54 HOH HOH . K 6 HOH A 29 57 57 HOH HOH . K 6 HOH A 30 59 59 HOH HOH . K 6 HOH A 31 60 60 HOH HOH . K 6 HOH A 32 63 63 HOH HOH . K 6 HOH A 33 69 69 HOH HOH . K 6 HOH A 34 71 71 HOH HOH . K 6 HOH A 35 73 73 HOH HOH . K 6 HOH A 36 75 75 HOH HOH . K 6 HOH A 37 76 76 HOH HOH . L 6 HOH B 1 4 4 HOH HOH . L 6 HOH B 2 6 6 HOH HOH . L 6 HOH B 3 7 7 HOH HOH . L 6 HOH B 4 9 9 HOH HOH . L 6 HOH B 5 10 10 HOH HOH . L 6 HOH B 6 12 12 HOH HOH . L 6 HOH B 7 13 13 HOH HOH . L 6 HOH B 8 16 16 HOH HOH . L 6 HOH B 9 19 19 HOH HOH . L 6 HOH B 10 20 20 HOH HOH . L 6 HOH B 11 24 24 HOH HOH . L 6 HOH B 12 31 31 HOH HOH . L 6 HOH B 13 32 32 HOH HOH . L 6 HOH B 14 34 34 HOH HOH . L 6 HOH B 15 35 35 HOH HOH . L 6 HOH B 16 38 38 HOH HOH . L 6 HOH B 17 45 45 HOH HOH . L 6 HOH B 18 49 49 HOH HOH . L 6 HOH B 19 50 50 HOH HOH . L 6 HOH B 20 65 65 HOH HOH . L 6 HOH B 21 67 67 HOH HOH . L 6 HOH B 22 68 68 HOH HOH . L 6 HOH B 23 70 70 HOH HOH . L 6 HOH B 24 74 74 HOH HOH . L 6 HOH B 25 77 77 HOH HOH . M 6 HOH C 1 23 23 HOH HOH . M 6 HOH C 2 36 36 HOH HOH . M 6 HOH C 3 40 40 HOH HOH . M 6 HOH C 4 79 79 HOH HOH . N 6 HOH D 1 26 26 HOH HOH . N 6 HOH D 2 37 37 HOH HOH . N 6 HOH D 3 55 55 HOH HOH . N 6 HOH D 4 56 56 HOH HOH . N 6 HOH D 5 58 58 HOH HOH . N 6 HOH D 6 72 72 HOH HOH . N 6 HOH D 7 78 78 HOH HOH . O 6 HOH E 1 61 61 HOH HOH . O 6 HOH E 2 62 62 HOH HOH . O 6 HOH E 3 64 64 HOH HOH . P 6 HOH F 1 11 11 HOH HOH . P 6 HOH F 2 29 29 HOH HOH . P 6 HOH F 3 66 66 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x 24.485 _atom_site.Cartn_y 26.227 _atom_site.Cartn_z 46.085 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 50 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #