data_1RRK # _model_server_result.job_id wJv3npdYSTOKNeShrsGYCQ _model_server_result.datetime_utc '2024-11-28 17:30:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rrk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":747}' # _entry.id 1RRK # _exptl.entry_id 1RRK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1RRK _cell.length_a 98.98 _cell.length_b 98.98 _cell.length_c 126.428 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RRK _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 186 A CYS 428 1_555 A SG CYS 193 A CYS 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 A SG CYS 211 A CYS 453 1_555 A SG CYS 329 A CYS 571 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf3 A SG CYS 244 A CYS 486 1_555 A SG CYS 260 A CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 A SG CYS 332 A CYS 574 1_555 A SG CYS 348 A CYS 590 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 A SG CYS 389 A CYS 631 1_555 A SG CYS 415 A CYS 657 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 A SG CYS 428 A CYS 670 1_555 A SG CYS 458 A CYS 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 A OG SER 11 A SER 253 1_555 K CO CO . A CO 749 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc2 A OG SER 13 A SER 255 1_555 K CO CO . A CO 749 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc3 A O LYS 81 A LYS 323 6_665 J NA NA . A NA 748 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? metalc ? metalc4 A OG1 THR 86 A THR 328 1_555 K CO CO . A CO 749 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc5 K CO CO . A CO 749 1_555 L O HOH . A HOH 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc6 K CO CO . A CO 749 1_555 L O HOH . A HOH 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc7 K CO CO . A CO 749 1_555 L O HOH . A HOH 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1RRK _atom_sites.fract_transf_matrix[1][1] 0.010103 _atom_sites.fract_transf_matrix[1][2] 0.005833 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011666 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00791 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 740 100 IOD I . C 2 IOD A 1 741 101 IOD I . D 3 NA A 1 742 100 NA NA . E 3 NA A 1 743 101 NA NA . F 3 NA A 1 744 102 NA NA . G 3 NA A 1 745 103 NA NA . H 3 NA A 1 746 104 NA NA . I 3 NA A 1 747 105 NA NA . J 3 NA A 1 748 106 NA NA . K 4 CO A 1 749 100 CO CO2 . L 5 HOH A 1 750 100 HOH TIP . L 5 HOH A 2 751 101 HOH TIP . L 5 HOH A 3 752 102 HOH TIP . L 5 HOH A 4 753 103 HOH TIP . L 5 HOH A 5 754 104 HOH TIP . L 5 HOH A 6 755 105 HOH TIP . L 5 HOH A 7 756 106 HOH TIP . L 5 HOH A 8 757 107 HOH TIP . L 5 HOH A 9 758 108 HOH TIP . L 5 HOH A 10 759 109 HOH TIP . L 5 HOH A 11 760 110 HOH TIP . L 5 HOH A 12 761 111 HOH TIP . L 5 HOH A 13 762 112 HOH TIP . L 5 HOH A 14 763 113 HOH TIP . L 5 HOH A 15 764 114 HOH TIP . L 5 HOH A 16 765 115 HOH TIP . L 5 HOH A 17 766 116 HOH TIP . L 5 HOH A 18 767 117 HOH TIP . L 5 HOH A 19 768 118 HOH TIP . L 5 HOH A 20 769 119 HOH TIP . L 5 HOH A 21 770 120 HOH TIP . L 5 HOH A 22 771 121 HOH TIP . L 5 HOH A 23 772 122 HOH TIP . L 5 HOH A 24 773 123 HOH TIP . L 5 HOH A 25 774 124 HOH TIP . L 5 HOH A 26 775 125 HOH TIP . L 5 HOH A 27 776 126 HOH TIP . L 5 HOH A 28 777 127 HOH TIP . L 5 HOH A 29 778 128 HOH TIP . L 5 HOH A 30 779 129 HOH TIP . L 5 HOH A 31 780 130 HOH TIP . L 5 HOH A 32 781 131 HOH TIP . L 5 HOH A 33 782 132 HOH TIP . L 5 HOH A 34 783 133 HOH TIP . L 5 HOH A 35 784 134 HOH TIP . L 5 HOH A 36 785 135 HOH TIP . L 5 HOH A 37 786 136 HOH TIP . L 5 HOH A 38 787 137 HOH TIP . L 5 HOH A 39 788 138 HOH TIP . L 5 HOH A 40 789 139 HOH TIP . L 5 HOH A 41 790 140 HOH TIP . L 5 HOH A 42 791 141 HOH TIP . L 5 HOH A 43 792 142 HOH TIP . L 5 HOH A 44 793 143 HOH TIP . L 5 HOH A 45 794 144 HOH TIP . L 5 HOH A 46 795 145 HOH TIP . L 5 HOH A 47 796 146 HOH TIP . L 5 HOH A 48 797 147 HOH TIP . L 5 HOH A 49 798 148 HOH TIP . L 5 HOH A 50 799 149 HOH TIP . L 5 HOH A 51 800 150 HOH TIP . L 5 HOH A 52 801 151 HOH TIP . L 5 HOH A 53 802 152 HOH TIP . L 5 HOH A 54 803 153 HOH TIP . L 5 HOH A 55 804 154 HOH TIP . L 5 HOH A 56 805 155 HOH TIP . L 5 HOH A 57 806 156 HOH TIP . L 5 HOH A 58 807 157 HOH TIP . L 5 HOH A 59 808 158 HOH TIP . L 5 HOH A 60 809 159 HOH TIP . L 5 HOH A 61 810 160 HOH TIP . L 5 HOH A 62 811 161 HOH TIP . L 5 HOH A 63 812 162 HOH TIP . L 5 HOH A 64 813 163 HOH TIP . L 5 HOH A 65 814 164 HOH TIP . L 5 HOH A 66 815 165 HOH TIP . L 5 HOH A 67 816 166 HOH TIP . L 5 HOH A 68 817 167 HOH TIP . L 5 HOH A 69 818 168 HOH TIP . L 5 HOH A 70 819 169 HOH TIP . L 5 HOH A 71 820 170 HOH TIP . L 5 HOH A 72 821 171 HOH TIP . L 5 HOH A 73 822 172 HOH TIP . L 5 HOH A 74 823 173 HOH TIP . L 5 HOH A 75 824 174 HOH TIP . L 5 HOH A 76 825 175 HOH TIP . L 5 HOH A 77 826 176 HOH TIP . L 5 HOH A 78 827 177 HOH TIP . L 5 HOH A 79 828 178 HOH TIP . L 5 HOH A 80 829 179 HOH TIP . L 5 HOH A 81 830 180 HOH TIP . L 5 HOH A 82 831 181 HOH TIP . L 5 HOH A 83 832 182 HOH TIP . L 5 HOH A 84 833 183 HOH TIP . L 5 HOH A 85 834 184 HOH TIP . L 5 HOH A 86 835 185 HOH TIP . L 5 HOH A 87 836 186 HOH TIP . L 5 HOH A 88 837 187 HOH TIP . L 5 HOH A 89 838 188 HOH TIP . L 5 HOH A 90 839 189 HOH TIP . L 5 HOH A 91 840 190 HOH TIP . L 5 HOH A 92 841 191 HOH TIP . L 5 HOH A 93 842 192 HOH TIP . L 5 HOH A 94 843 193 HOH TIP . L 5 HOH A 95 844 194 HOH TIP . L 5 HOH A 96 845 195 HOH TIP . L 5 HOH A 97 846 196 HOH TIP . L 5 HOH A 98 847 197 HOH TIP . L 5 HOH A 99 848 198 HOH TIP . L 5 HOH A 100 849 199 HOH TIP . L 5 HOH A 101 850 200 HOH TIP . L 5 HOH A 102 851 201 HOH TIP . L 5 HOH A 103 852 202 HOH TIP . L 5 HOH A 104 853 203 HOH TIP . L 5 HOH A 105 854 204 HOH TIP . L 5 HOH A 106 855 205 HOH TIP . L 5 HOH A 107 856 206 HOH TIP . L 5 HOH A 108 857 207 HOH TIP . L 5 HOH A 109 858 208 HOH TIP . L 5 HOH A 110 859 209 HOH TIP . L 5 HOH A 111 860 210 HOH TIP . L 5 HOH A 112 861 211 HOH TIP . L 5 HOH A 113 862 212 HOH TIP . L 5 HOH A 114 863 213 HOH TIP . L 5 HOH A 115 864 214 HOH TIP . L 5 HOH A 116 865 215 HOH TIP . L 5 HOH A 117 866 216 HOH TIP . L 5 HOH A 118 867 217 HOH TIP . L 5 HOH A 119 868 218 HOH TIP . L 5 HOH A 120 869 219 HOH TIP . L 5 HOH A 121 870 220 HOH TIP . L 5 HOH A 122 871 221 HOH TIP . L 5 HOH A 123 872 222 HOH TIP . L 5 HOH A 124 873 223 HOH TIP . L 5 HOH A 125 874 224 HOH TIP . L 5 HOH A 126 875 225 HOH TIP . L 5 HOH A 127 876 226 HOH TIP . L 5 HOH A 128 877 227 HOH TIP . L 5 HOH A 129 878 228 HOH TIP . L 5 HOH A 130 879 229 HOH TIP . L 5 HOH A 131 880 230 HOH TIP . L 5 HOH A 132 881 231 HOH TIP . L 5 HOH A 133 882 232 HOH TIP . L 5 HOH A 134 883 233 HOH TIP . L 5 HOH A 135 884 234 HOH TIP . L 5 HOH A 136 885 235 HOH TIP . L 5 HOH A 137 886 236 HOH TIP . L 5 HOH A 138 887 237 HOH TIP . L 5 HOH A 139 888 238 HOH TIP . L 5 HOH A 140 889 239 HOH TIP . L 5 HOH A 141 890 240 HOH TIP . L 5 HOH A 142 891 241 HOH TIP . L 5 HOH A 143 892 242 HOH TIP . L 5 HOH A 144 893 243 HOH TIP . L 5 HOH A 145 894 244 HOH TIP . L 5 HOH A 146 895 245 HOH TIP . L 5 HOH A 147 896 246 HOH TIP . L 5 HOH A 148 897 247 HOH TIP . L 5 HOH A 149 898 248 HOH TIP . L 5 HOH A 150 899 249 HOH TIP . L 5 HOH A 151 900 250 HOH TIP . L 5 HOH A 152 901 251 HOH TIP . L 5 HOH A 153 902 252 HOH TIP . L 5 HOH A 154 903 253 HOH TIP . L 5 HOH A 155 904 254 HOH TIP . L 5 HOH A 156 905 255 HOH TIP . L 5 HOH A 157 906 256 HOH TIP . L 5 HOH A 158 907 257 HOH TIP . L 5 HOH A 159 908 258 HOH TIP . L 5 HOH A 160 909 259 HOH TIP . L 5 HOH A 161 910 260 HOH TIP . L 5 HOH A 162 911 261 HOH TIP . L 5 HOH A 163 912 262 HOH TIP . L 5 HOH A 164 913 263 HOH TIP . L 5 HOH A 165 914 264 HOH TIP . L 5 HOH A 166 915 265 HOH TIP . L 5 HOH A 167 916 266 HOH TIP . L 5 HOH A 168 917 267 HOH TIP . L 5 HOH A 169 918 268 HOH TIP . L 5 HOH A 170 919 269 HOH TIP . L 5 HOH A 171 920 270 HOH TIP . L 5 HOH A 172 921 271 HOH TIP . L 5 HOH A 173 922 272 HOH TIP . L 5 HOH A 174 923 273 HOH TIP . L 5 HOH A 175 924 274 HOH TIP . L 5 HOH A 176 925 275 HOH TIP . L 5 HOH A 177 926 276 HOH TIP . L 5 HOH A 178 927 277 HOH TIP . L 5 HOH A 179 928 278 HOH TIP . L 5 HOH A 180 929 279 HOH TIP . L 5 HOH A 181 930 280 HOH TIP . L 5 HOH A 182 931 281 HOH TIP . L 5 HOH A 183 932 282 HOH TIP . L 5 HOH A 184 933 283 HOH TIP . L 5 HOH A 185 934 284 HOH TIP . L 5 HOH A 186 935 285 HOH TIP . L 5 HOH A 187 936 286 HOH TIP . L 5 HOH A 188 937 287 HOH TIP . L 5 HOH A 189 938 288 HOH TIP . L 5 HOH A 190 939 289 HOH TIP . L 5 HOH A 191 940 290 HOH TIP . L 5 HOH A 192 941 291 HOH TIP . L 5 HOH A 193 942 292 HOH TIP . L 5 HOH A 194 943 293 HOH TIP . L 5 HOH A 195 944 294 HOH TIP . L 5 HOH A 196 945 295 HOH TIP . L 5 HOH A 197 946 296 HOH TIP . L 5 HOH A 198 947 297 HOH TIP . L 5 HOH A 199 948 298 HOH TIP . L 5 HOH A 200 949 299 HOH TIP . L 5 HOH A 201 950 300 HOH TIP . L 5 HOH A 202 951 301 HOH TIP . L 5 HOH A 203 952 302 HOH TIP . L 5 HOH A 204 953 303 HOH TIP . L 5 HOH A 205 954 304 HOH TIP . L 5 HOH A 206 955 305 HOH TIP . L 5 HOH A 207 956 306 HOH TIP . L 5 HOH A 208 957 307 HOH TIP . L 5 HOH A 209 958 308 HOH TIP . L 5 HOH A 210 959 309 HOH TIP . L 5 HOH A 211 960 310 HOH TIP . L 5 HOH A 212 961 311 HOH TIP . L 5 HOH A 213 962 312 HOH TIP . L 5 HOH A 214 963 313 HOH TIP . L 5 HOH A 215 964 314 HOH TIP . L 5 HOH A 216 965 315 HOH TIP . L 5 HOH A 217 966 316 HOH TIP . L 5 HOH A 218 967 317 HOH TIP . L 5 HOH A 219 968 318 HOH TIP . L 5 HOH A 220 969 319 HOH TIP . L 5 HOH A 221 970 320 HOH TIP . L 5 HOH A 222 971 321 HOH TIP . L 5 HOH A 223 972 322 HOH TIP . L 5 HOH A 224 973 323 HOH TIP . L 5 HOH A 225 974 324 HOH TIP . L 5 HOH A 226 975 325 HOH TIP . L 5 HOH A 227 976 326 HOH TIP . L 5 HOH A 228 977 327 HOH TIP . L 5 HOH A 229 978 328 HOH TIP . L 5 HOH A 230 979 329 HOH TIP . L 5 HOH A 231 980 330 HOH TIP . L 5 HOH A 232 981 331 HOH TIP . L 5 HOH A 233 982 332 HOH TIP . L 5 HOH A 234 983 333 HOH TIP . L 5 HOH A 235 984 334 HOH TIP . L 5 HOH A 236 985 335 HOH TIP . L 5 HOH A 237 986 336 HOH TIP . L 5 HOH A 238 987 337 HOH TIP . L 5 HOH A 239 988 338 HOH TIP . L 5 HOH A 240 989 339 HOH TIP . L 5 HOH A 241 990 340 HOH TIP . L 5 HOH A 242 991 341 HOH TIP . L 5 HOH A 243 992 342 HOH TIP . L 5 HOH A 244 993 343 HOH TIP . L 5 HOH A 245 994 344 HOH TIP . L 5 HOH A 246 995 345 HOH TIP . L 5 HOH A 247 996 346 HOH TIP . L 5 HOH A 248 997 347 HOH TIP . L 5 HOH A 249 998 348 HOH TIP . L 5 HOH A 250 999 349 HOH TIP . L 5 HOH A 251 1000 350 HOH TIP . L 5 HOH A 252 1001 351 HOH TIP . L 5 HOH A 253 1002 352 HOH TIP . L 5 HOH A 254 1003 353 HOH TIP . L 5 HOH A 255 1004 354 HOH TIP . L 5 HOH A 256 1005 355 HOH TIP . L 5 HOH A 257 1006 356 HOH TIP . L 5 HOH A 258 1007 357 HOH TIP . L 5 HOH A 259 1008 358 HOH TIP . L 5 HOH A 260 1009 359 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 3 _atom_site.Cartn_x -42.122 _atom_site.Cartn_y 76.657 _atom_site.Cartn_z -20.283 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 747 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 1 #