data_1RT7 # _model_server_result.job_id pty9WAylibM5FcupLnfIjw _model_server_result.datetime_utc '2024-10-26 06:39:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rt7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":999}' # _entry.id 1RT7 # _exptl.entry_id 1RT7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 355.836 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-METHYL ETHYL 1-CHLORO-5-[[(5,6DIHYDRO-2-METHYL-1,4-OXATHIIN-3-YL)CARBONYL]AMINO]BENZOATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1RT7 _cell.length_a 137.6 _cell.length_b 109.5 _cell.length_c 72 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RT7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 279 A LEU 279 1_555 A N CSD 280 A CSD 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C CSD 280 A CSD 280 1_555 A N LYS 281 A LYS 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C16 H18 Cl N O4 S' _chem_comp.formula_weight 355.836 _chem_comp.id UC4 _chem_comp.mon_nstd_flag . _chem_comp.name '1-METHYL ETHYL 1-CHLORO-5-[[(5,6DIHYDRO-2-METHYL-1,4-OXATHIIN-3-YL)CARBONYL]AMINO]BENZOATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms UC84 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C2 UC4 sing 377 n n C1 C2 UC4 doub 378 n y C1 C6 UC4 sing 379 n y C1 C7 UC4 sing 380 n n C2 C3 UC4 sing 381 n y C3 C4 UC4 doub 382 n y C3 H3 UC4 sing 383 n n C4 C5 UC4 sing 384 n y C4 H4 UC4 sing 385 n n C5 C6 UC4 doub 386 n y C5 N UC4 sing 387 n n C6 H6 UC4 sing 388 n n O7 C7 UC4 doub 389 n n C7 O8 UC4 sing 390 n n O8 C8 UC4 sing 391 n n C8 C9 UC4 sing 392 n n C8 C10 UC4 sing 393 n n C8 H8 UC4 sing 394 n n C9 H91 UC4 sing 395 n n C9 H92 UC4 sing 396 n n C9 H93 UC4 sing 397 n n C10 H101 UC4 sing 398 n n C10 H102 UC4 sing 399 n n C10 H103 UC4 sing 400 n n OA CB UC4 sing 401 n n OA CE UC4 sing 402 n n CB CC UC4 doub 403 n n CB CF UC4 sing 404 n n CC S UC4 sing 405 n n CC CG UC4 sing 406 n n S CD UC4 sing 407 n n CD CE UC4 sing 408 n n CD HD1 UC4 sing 409 n n CD HD2 UC4 sing 410 n n CE HE1 UC4 sing 411 n n CE HE2 UC4 sing 412 n n CF HF1 UC4 sing 413 n n CF HF2 UC4 sing 414 n n CF HF3 UC4 sing 415 n n OG CG UC4 doub 416 n n CG N UC4 sing 417 n n N HN UC4 sing 418 n n # _atom_sites.entry_id 1RT7 _atom_sites.fract_transf_matrix[1][1] 0.007267 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009132 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013889 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 1000 1000 PO4 PO4 . D 4 UC4 A 1 999 999 UC4 UC4 . E 5 HOH A 1 1001 1001 HOH HOH . E 5 HOH A 2 1002 1002 HOH HOH . E 5 HOH A 3 1003 1003 HOH HOH . E 5 HOH A 4 1004 1004 HOH HOH . E 5 HOH A 5 1005 1005 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL UC4 . . . D 4 -4.423 -32.908 25.781 1 40.33 ? CL UC4 999 A 1 HETATM 2 C C1 UC4 . . . D 4 -2.013 -34.024 24.841 1 26.93 ? C1 UC4 999 A 1 HETATM 3 C C2 UC4 . . . D 4 -3.292 -33.477 24.556 1 25.31 ? C2 UC4 999 A 1 HETATM 4 C C3 UC4 . . . D 4 -3.725 -33.385 23.231 1 23.09 ? C3 UC4 999 A 1 HETATM 5 C C4 UC4 . . . D 4 -2.944 -33.826 22.207 1 28.5 ? C4 UC4 999 A 1 HETATM 6 C C5 UC4 . . . D 4 -1.684 -34.379 22.461 1 27.28 ? C5 UC4 999 A 1 HETATM 7 C C6 UC4 . . . D 4 -1.228 -34.459 23.778 1 14.85 ? C6 UC4 999 A 1 HETATM 8 O O7 UC4 . . . D 4 -0.939 -35.291 26.558 1 53.79 ? O7 UC4 999 A 1 HETATM 9 C C7 UC4 . . . D 4 -1.383 -34.234 26.204 1 47.09 ? C7 UC4 999 A 1 HETATM 10 O O8 UC4 . . . D 4 -1.372 -33.153 26.937 1 56.97 ? O8 UC4 999 A 1 HETATM 11 C C8 UC4 . . . D 4 -0.081 -32.538 27.219 1 49.62 ? C8 UC4 999 A 1 HETATM 12 C C9 UC4 . . . D 4 -0.127 -31.185 26.604 1 35.72 ? C9 UC4 999 A 1 HETATM 13 C C10 UC4 . . . D 4 0.061 -32.545 28.7 1 40.74 ? C10 UC4 999 A 1 HETATM 14 O OA UC4 . . . D 4 -0.615 -38.054 24.313 1 15.15 ? OA UC4 999 A 1 HETATM 15 C CB UC4 . . . D 4 -0.707 -37.362 23.14 1 14.99 ? CB UC4 999 A 1 HETATM 16 C CC UC4 . . . D 4 0.334 -36.746 22.549 1 27.43 ? CC UC4 999 A 1 HETATM 17 S S UC4 . . . D 4 2.007 -37.037 23.055 1 58.33 ? S UC4 999 A 1 HETATM 18 C CD UC4 . . . D 4 1.754 -37.84 24.645 1 40.98 ? CD UC4 999 A 1 HETATM 19 C CE UC4 . . . D 4 0.581 -38.72 24.634 1 26.73 ? CE UC4 999 A 1 HETATM 20 C CF UC4 . . . D 4 -2.083 -37.426 22.676 1 18.18 ? CF UC4 999 A 1 HETATM 21 O OG UC4 . . . D 4 0.998 -35.72 20.459 1 20.08 ? OG UC4 999 A 1 HETATM 22 C CG UC4 . . . D 4 0.189 -35.757 21.372 1 23.99 ? CG UC4 999 A 1 HETATM 23 N N UC4 . . . D 4 -0.909 -34.894 21.383 1 19.97 ? N UC4 999 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #