data_1RTL # _model_server_result.job_id Li4nGCQ74cJbTtoRXc2AvA _model_server_result.datetime_utc '2025-09-04 05:49:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rtl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 1RTL # _exptl.entry_id 1RTL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1RTL _cell.length_a 224.082 _cell.length_b 224.082 _cell.length_c 75.694 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RTL _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 150 A SER 139 1_555 F C24 CPX . A CPX 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? metalc ? metalc1 A SG CYS 108 A CYS 97 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc2 A SG CYS 110 A CYS 99 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc3 A SG CYS 156 A CYS 145 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc4 E ZN ZN . A ZN 301 1_555 H O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc5 B SG CYS 108 B CYS 97 1_555 G ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc6 B SG CYS 110 B CYS 99 1_555 G ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc7 B SG CYS 156 B CYS 145 1_555 G ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc8 G ZN ZN . B ZN 301 1_555 I O HOH . B HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1RTL _atom_sites.fract_transf_matrix[1][1] 0.004463 _atom_sites.fract_transf_matrix[1][2] 0.002577 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005153 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013211 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 301 301 ZN ZN . F 4 CPX A 1 201 201 CPX CPX . G 3 ZN B 1 301 301 ZN ZN . H 5 HOH A 1 302 2 HOH HOH . H 5 HOH A 2 303 4 HOH HOH . H 5 HOH A 3 304 5 HOH HOH . H 5 HOH A 4 305 6 HOH HOH . H 5 HOH A 5 306 7 HOH HOH . H 5 HOH A 6 307 8 HOH HOH . H 5 HOH A 7 308 9 HOH HOH . H 5 HOH A 8 309 11 HOH HOH . H 5 HOH A 9 310 12 HOH HOH . H 5 HOH A 10 311 13 HOH HOH . H 5 HOH A 11 312 14 HOH HOH . H 5 HOH A 12 313 15 HOH HOH . H 5 HOH A 13 314 16 HOH HOH . H 5 HOH A 14 315 17 HOH HOH . H 5 HOH A 15 316 18 HOH HOH . H 5 HOH A 16 317 20 HOH HOH . H 5 HOH A 17 318 22 HOH HOH . H 5 HOH A 18 319 23 HOH HOH . H 5 HOH A 19 320 24 HOH HOH . H 5 HOH A 20 321 25 HOH HOH . H 5 HOH A 21 322 26 HOH HOH . H 5 HOH A 22 323 27 HOH HOH . H 5 HOH A 23 324 28 HOH HOH . H 5 HOH A 24 325 29 HOH HOH . H 5 HOH A 25 326 30 HOH HOH . H 5 HOH A 26 327 31 HOH HOH . H 5 HOH A 27 328 32 HOH HOH . H 5 HOH A 28 329 33 HOH HOH . H 5 HOH A 29 330 34 HOH HOH . H 5 HOH A 30 331 35 HOH HOH . H 5 HOH A 31 332 36 HOH HOH . H 5 HOH A 32 333 37 HOH HOH . H 5 HOH A 33 334 38 HOH HOH . H 5 HOH A 34 335 39 HOH HOH . H 5 HOH A 35 336 82 HOH HOH . H 5 HOH A 36 337 83 HOH HOH . H 5 HOH A 37 338 84 HOH HOH . H 5 HOH A 38 339 85 HOH HOH . H 5 HOH A 39 340 86 HOH HOH . H 5 HOH A 40 341 87 HOH HOH . H 5 HOH A 41 342 88 HOH HOH . H 5 HOH A 42 343 89 HOH HOH . H 5 HOH A 43 344 90 HOH HOH . H 5 HOH A 44 345 91 HOH HOH . H 5 HOH A 45 346 92 HOH HOH . H 5 HOH A 46 347 93 HOH HOH . H 5 HOH A 47 348 94 HOH HOH . H 5 HOH A 48 349 95 HOH HOH . H 5 HOH A 49 350 102 HOH HOH . I 5 HOH B 1 302 40 HOH HOH . I 5 HOH B 2 303 41 HOH HOH . I 5 HOH B 3 304 43 HOH HOH . I 5 HOH B 4 305 44 HOH HOH . I 5 HOH B 5 306 46 HOH HOH . I 5 HOH B 6 307 47 HOH HOH . I 5 HOH B 7 308 48 HOH HOH . I 5 HOH B 8 309 50 HOH HOH . I 5 HOH B 9 310 52 HOH HOH . I 5 HOH B 10 311 53 HOH HOH . I 5 HOH B 11 312 55 HOH HOH . I 5 HOH B 12 313 56 HOH HOH . I 5 HOH B 13 314 57 HOH HOH . I 5 HOH B 14 315 60 HOH HOH . I 5 HOH B 15 316 61 HOH HOH . I 5 HOH B 16 317 62 HOH HOH . I 5 HOH B 17 318 63 HOH HOH . I 5 HOH B 18 319 64 HOH HOH . I 5 HOH B 19 320 67 HOH HOH . I 5 HOH B 20 321 68 HOH HOH . I 5 HOH B 21 322 70 HOH HOH . I 5 HOH B 22 323 71 HOH HOH . I 5 HOH B 23 324 72 HOH HOH . I 5 HOH B 24 325 73 HOH HOH . I 5 HOH B 25 326 74 HOH HOH . I 5 HOH B 26 327 75 HOH HOH . I 5 HOH B 27 328 76 HOH HOH . I 5 HOH B 28 329 77 HOH HOH . I 5 HOH B 29 330 78 HOH HOH . I 5 HOH B 30 331 79 HOH HOH . I 5 HOH B 31 332 96 HOH HOH . I 5 HOH B 32 333 97 HOH HOH . I 5 HOH B 33 334 98 HOH HOH . I 5 HOH B 34 335 99 HOH HOH . I 5 HOH B 35 336 100 HOH HOH . I 5 HOH B 36 337 101 HOH HOH . J 5 HOH C 1 42 1 HOH HOH . J 5 HOH C 2 43 3 HOH HOH . J 5 HOH C 3 44 10 HOH HOH . J 5 HOH C 4 45 19 HOH HOH . J 5 HOH C 5 46 21 HOH HOH . K 5 HOH D 1 42 42 HOH HOH . K 5 HOH D 2 45 45 HOH HOH . K 5 HOH D 3 49 49 HOH HOH . K 5 HOH D 4 51 51 HOH HOH . K 5 HOH D 5 54 54 HOH HOH . K 5 HOH D 6 58 58 HOH HOH . K 5 HOH D 7 59 59 HOH HOH . K 5 HOH D 8 65 65 HOH HOH . K 5 HOH D 9 66 66 HOH HOH . K 5 HOH D 10 69 69 HOH HOH . K 5 HOH D 11 80 80 HOH HOH . K 5 HOH D 12 81 81 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x 32.3 _atom_site.Cartn_y 28.93 _atom_site.Cartn_z 10.967 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #