data_1RTZ # _model_server_result.job_id RAiVmlvysiUwxN5e6sQxAQ _model_server_result.datetime_utc '2024-11-08 01:15:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rtz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":172}' # _entry.id 1RTZ # _exptl.entry_id 1RTZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1RTZ _cell.length_a 41.266 _cell.length_b 41.685 _cell.length_c 77.896 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RTZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 26 A GLY 26 1_555 D MG MG . A MG 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc2 A O SER 31 A SER 31 1_555 D MG MG . A MG 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc3 A OD1 ASP 89 A ASP 95 1_555 B MG MG . A MG 161 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.886 ? metalc ? metalc4 A OD1 ASP 91 A ASP 97 1_555 B MG MG . A MG 161 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc5 A OD2 ASP 91 A ASP 97 1_555 B MG MG . A MG 161 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc6 A OE2 GLU 135 A GLU 141 1_555 C MG MG . A MG 162 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc7 B MG MG . A MG 161 1_555 I O1 GOL . A GOL 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc8 B MG MG . A MG 161 1_555 J O HOH . A HOH 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc9 B MG MG . A MG 161 1_555 J O HOH . A HOH 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc10 B MG MG . A MG 161 1_555 J O HOH . A HOH 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc11 C MG MG . A MG 162 1_555 J O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc12 C MG MG . A MG 162 1_555 J O HOH . A HOH 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc13 C MG MG . A MG 162 1_555 J O HOH . A HOH 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc14 C MG MG . A MG 162 1_555 J O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc15 C MG MG . A MG 162 1_555 J O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc16 D MG MG . A MG 163 1_555 J O HOH . A HOH 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc17 D MG MG . A MG 163 1_555 J O HOH . A HOH 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc18 D MG MG . A MG 163 1_555 J O HOH . A HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc19 D MG MG . A MG 163 1_555 J O HOH . A HOH 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 1RTZ _atom_sites.fract_transf_matrix[1][1] 0.024233 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023989 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012838 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 161 161 MG MG . C 2 MG A 1 162 162 MG MG . D 2 MG A 1 163 163 MG MG . E 3 CL A 1 164 164 CL CL . F 3 CL A 1 165 165 CL CL . G 3 CL A 1 166 166 CL CL . H 4 GOL A 1 171 171 GOL GOL . I 4 GOL A 1 172 172 GOL GOL . J 5 HOH A 1 201 201 HOH HOH . J 5 HOH A 2 202 202 HOH HOH . J 5 HOH A 3 203 203 HOH HOH . J 5 HOH A 4 204 204 HOH HOH . J 5 HOH A 5 205 205 HOH HOH . J 5 HOH A 6 206 206 HOH HOH . J 5 HOH A 7 207 207 HOH HOH . J 5 HOH A 8 208 208 HOH HOH . J 5 HOH A 9 209 209 HOH HOH . J 5 HOH A 10 210 210 HOH HOH . J 5 HOH A 11 211 211 HOH HOH . J 5 HOH A 12 212 212 HOH HOH . J 5 HOH A 13 213 213 HOH HOH . J 5 HOH A 14 214 214 HOH HOH . J 5 HOH A 15 215 215 HOH HOH . J 5 HOH A 16 216 216 HOH HOH . J 5 HOH A 17 217 217 HOH HOH . J 5 HOH A 18 218 218 HOH HOH . J 5 HOH A 19 219 219 HOH HOH . J 5 HOH A 20 220 220 HOH HOH . J 5 HOH A 21 221 221 HOH HOH . J 5 HOH A 22 222 222 HOH HOH . J 5 HOH A 23 223 223 HOH HOH . J 5 HOH A 24 224 224 HOH HOH . J 5 HOH A 25 225 225 HOH HOH . J 5 HOH A 26 226 226 HOH HOH . J 5 HOH A 27 227 227 HOH HOH . J 5 HOH A 28 228 228 HOH HOH . J 5 HOH A 29 229 229 HOH HOH . J 5 HOH A 30 230 230 HOH HOH . J 5 HOH A 31 231 231 HOH HOH . J 5 HOH A 32 232 232 HOH HOH . J 5 HOH A 33 233 233 HOH HOH . J 5 HOH A 34 234 234 HOH HOH . J 5 HOH A 35 235 235 HOH HOH . J 5 HOH A 36 236 236 HOH HOH . J 5 HOH A 37 237 237 HOH HOH . J 5 HOH A 38 238 238 HOH HOH . J 5 HOH A 39 239 239 HOH HOH . J 5 HOH A 40 240 240 HOH HOH . J 5 HOH A 41 241 241 HOH HOH . J 5 HOH A 42 242 242 HOH HOH . J 5 HOH A 43 243 243 HOH HOH . J 5 HOH A 44 244 244 HOH HOH . J 5 HOH A 45 245 245 HOH HOH . J 5 HOH A 46 246 246 HOH HOH . J 5 HOH A 47 247 247 HOH HOH . J 5 HOH A 48 248 248 HOH HOH . J 5 HOH A 49 249 249 HOH HOH . J 5 HOH A 50 250 250 HOH HOH . J 5 HOH A 51 251 251 HOH HOH . J 5 HOH A 52 252 252 HOH HOH . J 5 HOH A 53 253 253 HOH HOH . J 5 HOH A 54 254 254 HOH HOH . J 5 HOH A 55 255 255 HOH HOH . J 5 HOH A 56 256 256 HOH HOH . J 5 HOH A 57 257 257 HOH HOH . J 5 HOH A 58 258 258 HOH HOH . J 5 HOH A 59 259 259 HOH HOH . J 5 HOH A 60 260 260 HOH HOH . J 5 HOH A 61 261 261 HOH HOH . J 5 HOH A 62 262 262 HOH HOH . J 5 HOH A 63 263 263 HOH HOH . J 5 HOH A 64 264 264 HOH HOH . J 5 HOH A 65 265 265 HOH HOH . J 5 HOH A 66 266 266 HOH HOH . J 5 HOH A 67 267 267 HOH HOH . J 5 HOH A 68 268 268 HOH HOH . J 5 HOH A 69 269 269 HOH HOH . J 5 HOH A 70 270 270 HOH HOH . J 5 HOH A 71 271 271 HOH HOH . J 5 HOH A 72 272 272 HOH HOH . J 5 HOH A 73 273 273 HOH HOH . J 5 HOH A 74 274 274 HOH HOH . J 5 HOH A 75 275 275 HOH HOH . J 5 HOH A 76 276 276 HOH HOH . J 5 HOH A 77 277 277 HOH HOH . J 5 HOH A 78 278 278 HOH HOH . J 5 HOH A 79 279 279 HOH HOH . J 5 HOH A 80 280 280 HOH HOH . J 5 HOH A 81 281 281 HOH HOH . J 5 HOH A 82 282 282 HOH HOH . J 5 HOH A 83 283 283 HOH HOH . J 5 HOH A 84 284 284 HOH HOH . J 5 HOH A 85 285 285 HOH HOH . J 5 HOH A 86 286 286 HOH HOH . J 5 HOH A 87 287 287 HOH HOH . J 5 HOH A 88 288 288 HOH HOH . J 5 HOH A 89 289 289 HOH HOH . J 5 HOH A 90 290 290 HOH HOH . J 5 HOH A 91 291 291 HOH HOH . J 5 HOH A 92 292 292 HOH HOH . J 5 HOH A 93 293 293 HOH HOH . J 5 HOH A 94 294 294 HOH HOH . J 5 HOH A 95 295 295 HOH HOH . J 5 HOH A 96 296 296 HOH HOH . J 5 HOH A 97 297 297 HOH HOH . J 5 HOH A 98 298 298 HOH HOH . J 5 HOH A 99 299 299 HOH HOH . J 5 HOH A 100 300 300 HOH HOH . J 5 HOH A 101 301 301 HOH HOH . J 5 HOH A 102 302 302 HOH HOH . J 5 HOH A 103 303 303 HOH HOH . J 5 HOH A 104 304 304 HOH HOH . J 5 HOH A 105 305 305 HOH HOH . J 5 HOH A 106 306 306 HOH HOH . J 5 HOH A 107 307 307 HOH HOH . J 5 HOH A 108 308 308 HOH HOH . J 5 HOH A 109 309 309 HOH HOH . J 5 HOH A 110 310 310 HOH HOH . J 5 HOH A 111 311 311 HOH HOH . J 5 HOH A 112 312 312 HOH HOH . J 5 HOH A 113 313 313 HOH HOH . J 5 HOH A 114 314 314 HOH HOH . J 5 HOH A 115 315 315 HOH HOH . J 5 HOH A 116 316 316 HOH HOH . J 5 HOH A 117 317 317 HOH HOH . J 5 HOH A 118 318 318 HOH HOH . J 5 HOH A 119 319 319 HOH HOH . J 5 HOH A 120 320 320 HOH HOH . J 5 HOH A 121 321 321 HOH HOH . J 5 HOH A 122 322 322 HOH HOH . J 5 HOH A 123 323 323 HOH HOH . J 5 HOH A 124 324 324 HOH HOH . J 5 HOH A 125 325 325 HOH HOH . J 5 HOH A 126 326 326 HOH HOH . J 5 HOH A 127 327 327 HOH HOH . J 5 HOH A 128 328 328 HOH HOH . J 5 HOH A 129 329 329 HOH HOH . J 5 HOH A 130 330 330 HOH HOH . J 5 HOH A 131 331 331 HOH HOH . J 5 HOH A 132 332 332 HOH HOH . J 5 HOH A 133 333 333 HOH HOH . J 5 HOH A 134 334 334 HOH HOH . J 5 HOH A 135 335 335 HOH HOH . J 5 HOH A 136 336 336 HOH HOH . J 5 HOH A 137 337 337 HOH HOH . J 5 HOH A 138 338 338 HOH HOH . J 5 HOH A 139 339 339 HOH HOH . J 5 HOH A 140 340 340 HOH HOH . J 5 HOH A 141 341 341 HOH HOH . J 5 HOH A 142 342 342 HOH HOH . J 5 HOH A 143 343 343 HOH HOH . J 5 HOH A 144 344 344 HOH HOH . J 5 HOH A 145 345 345 HOH HOH . J 5 HOH A 146 346 346 HOH HOH . J 5 HOH A 147 347 347 HOH HOH . J 5 HOH A 148 348 348 HOH HOH . J 5 HOH A 149 349 349 HOH HOH . J 5 HOH A 150 350 350 HOH HOH . J 5 HOH A 151 351 351 HOH HOH . J 5 HOH A 152 352 352 HOH HOH . J 5 HOH A 153 353 353 HOH HOH . J 5 HOH A 154 354 354 HOH HOH . J 5 HOH A 155 355 355 HOH HOH . J 5 HOH A 156 356 356 HOH HOH . J 5 HOH A 157 357 357 HOH HOH . J 5 HOH A 158 358 358 HOH HOH . J 5 HOH A 159 359 359 HOH HOH . J 5 HOH A 160 360 360 HOH HOH . J 5 HOH A 161 361 361 HOH HOH . J 5 HOH A 162 362 362 HOH HOH . J 5 HOH A 163 363 363 HOH HOH . J 5 HOH A 164 364 364 HOH HOH . J 5 HOH A 165 365 365 HOH HOH . J 5 HOH A 166 366 366 HOH HOH . J 5 HOH A 167 367 367 HOH HOH . J 5 HOH A 168 368 368 HOH HOH . J 5 HOH A 169 369 369 HOH HOH . J 5 HOH A 170 370 370 HOH HOH . J 5 HOH A 171 371 371 HOH HOH . J 5 HOH A 172 372 372 HOH HOH . J 5 HOH A 173 373 373 HOH HOH . J 5 HOH A 174 374 374 HOH HOH . J 5 HOH A 175 375 375 HOH HOH . J 5 HOH A 176 376 376 HOH HOH . J 5 HOH A 177 377 377 HOH HOH . J 5 HOH A 178 378 378 HOH HOH . J 5 HOH A 179 379 379 HOH HOH . J 5 HOH A 180 380 380 HOH HOH . J 5 HOH A 181 381 381 HOH HOH . J 5 HOH A 182 382 382 HOH HOH . J 5 HOH A 183 383 383 HOH HOH . J 5 HOH A 184 384 384 HOH HOH . J 5 HOH A 185 385 385 HOH HOH . J 5 HOH A 186 386 386 HOH HOH . J 5 HOH A 187 387 387 HOH HOH . J 5 HOH A 188 388 388 HOH HOH . J 5 HOH A 189 389 389 HOH HOH . J 5 HOH A 190 390 390 HOH HOH . J 5 HOH A 191 391 391 HOH HOH . J 5 HOH A 192 392 392 HOH HOH . J 5 HOH A 193 393 393 HOH HOH . J 5 HOH A 194 394 394 HOH HOH . J 5 HOH A 195 395 395 HOH HOH . J 5 HOH A 196 396 396 HOH HOH . J 5 HOH A 197 397 397 HOH HOH . J 5 HOH A 198 398 398 HOH HOH . J 5 HOH A 199 399 399 HOH HOH . J 5 HOH A 200 400 400 HOH HOH . J 5 HOH A 201 401 401 HOH HOH . J 5 HOH A 202 402 402 HOH HOH . J 5 HOH A 203 403 403 HOH HOH . J 5 HOH A 204 404 404 HOH HOH . J 5 HOH A 205 405 405 HOH HOH . J 5 HOH A 206 406 406 HOH HOH . J 5 HOH A 207 407 407 HOH HOH . J 5 HOH A 208 408 408 HOH HOH . J 5 HOH A 209 409 409 HOH HOH . J 5 HOH A 210 410 410 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . I 4 20.064 19.84 4.075 0.5 27.44 ? C1 GOL 172 A 1 HETATM 2 O O1 GOL . . . I 4 19.252 20.928 3.952 0.5 24.02 ? O1 GOL 172 A 1 HETATM 3 C C2 GOL . . . I 4 21.533 20.302 4.181 0.5 29.25 ? C2 GOL 172 A 1 HETATM 4 O O2 GOL . . . I 4 21.61 21.266 5.202 0.5 42.18 ? O2 GOL 172 A 1 HETATM 5 C C3 GOL . . . I 4 21.922 20.82 2.826 0.5 33.93 ? C3 GOL 172 A 1 HETATM 6 O O3 GOL . . . I 4 22.303 19.927 1.905 0.5 46.98 ? O3 GOL 172 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #