data_1RVJ
#
_model_server_result.job_id            Ry6IHOxhU_FbognhTzlOwg 
_model_server_result.datetime_utc      '2024-11-24 19:46:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1rvj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":862}' 
#
_entry.id    1RVJ 
#
_exptl.entry_id    1RVJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              229.402 
_entity.id                          10 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LAURYL DIMETHYLAMINE-N-OXIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1RVJ 
_cell.length_a            138.242 
_cell.length_b            138.242 
_cell.length_c            184.396 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1RVJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 10 O N N 
? 10 P N N 
? 10 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 190 L HIS 190 1_555 H FE FE2 . M FE2 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc2 A NE2 HIS 230 L HIS 230 1_555 H FE FE2 . M FE2 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc3 B NE2 HIS 219 M HIS 219 1_555 H FE FE2 . M FE2 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc4 B OE2 GLU 234 M GLU 234 1_555 H FE FE2 . M FE2 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc5 B OE1 GLU 234 M GLU 234 1_555 H FE FE2 . M FE2 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? 
metalc ? metalc6 B NE2 HIS 266 M HIS 266 1_555 H FE FE2 . M FE2 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? 
#
_chem_comp.formula           'C14 H31 N O' 
_chem_comp.formula_weight    229.402 
_chem_comp.id                LDA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LAURYL DIMETHYLAMINE-N-OXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 O1 LDA sing 722 n n 
N1 CM1 LDA sing 723 n n 
N1 CM2 LDA sing 724 n n 
N1 C1 LDA sing 725 n n 
CM1 HM11 LDA sing 726 n n 
CM1 HM12 LDA sing 727 n n 
CM1 HM13 LDA sing 728 n n 
CM2 HM21 LDA sing 729 n n 
CM2 HM22 LDA sing 730 n n 
CM2 HM23 LDA sing 731 n n 
C1 C2 LDA sing 732 n n 
C1 H11 LDA sing 733 n n 
C1 H12 LDA sing 734 n n 
C2 C3 LDA sing 735 n n 
C2 H21 LDA sing 736 n n 
C2 H22 LDA sing 737 n n 
C3 C4 LDA sing 738 n n 
C3 H31 LDA sing 739 n n 
C3 H32 LDA sing 740 n n 
C4 C5 LDA sing 741 n n 
C4 H41 LDA sing 742 n n 
C4 H42 LDA sing 743 n n 
C5 C6 LDA sing 744 n n 
C5 H51 LDA sing 745 n n 
C5 H52 LDA sing 746 n n 
C6 C7 LDA sing 747 n n 
C6 H61 LDA sing 748 n n 
C6 H62 LDA sing 749 n n 
C7 C8 LDA sing 750 n n 
C7 H71 LDA sing 751 n n 
C7 H72 LDA sing 752 n n 
C8 C9 LDA sing 753 n n 
C8 H81 LDA sing 754 n n 
C8 H82 LDA sing 755 n n 
C9 C10 LDA sing 756 n n 
C9 H91 LDA sing 757 n n 
C9 H92 LDA sing 758 n n 
C10 C11 LDA sing 759 n n 
C10 H101 LDA sing 760 n n 
C10 H102 LDA sing 761 n n 
C11 C12 LDA sing 762 n n 
C11 H111 LDA sing 763 n n 
C11 H112 LDA sing 764 n n 
C12 H121 LDA sing 765 n n 
C12 H122 LDA sing 766 n n 
C12 H123 LDA sing 767 n n 
#
_atom_sites.entry_id                     1RVJ 
_atom_sites.fract_transf_matrix[1][1]    0.007234 
_atom_sites.fract_transf_matrix[1][2]    0.004176 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008353 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005423 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 BCL L 1 851 851 BCL BCL . 
E 4 BCL L 1 852 852 BCL BCL . 
F 5 BPH L 1 856 856 BPH BPH . 
G 6 U10 L 1 859 859 U10 U10 . 
H 7 FE2 M 1 857 857 FE2 FE . 
I 8 PO4 M 1 864 864 PO4 PO4 . 
J 4 BCL M 1 853 853 BCL BCL . 
K 4 BCL M 1 854 854 BCL BCL . 
L 5 BPH M 1 855 855 BPH BPH . 
M 6 U10 M 1 858 858 U10 U10 . 
N 9 SPO M 1 860 860 SPO SPO . 
O 10 LDA M 1 861 861 LDA LDA . 
P 10 LDA M 1 863 863 LDA LDA . 
Q 11 CDL M 1 900 900 CDL CDL . 
R 10 LDA H 1 862 862 LDA LDA . 
S 12 HOH L 1 1007 1007 HOH HOH . 
S 12 HOH L 2 1009 1009 HOH HOH . 
S 12 HOH L 3 1016 1016 HOH HOH . 
S 12 HOH L 4 1017 1017 HOH HOH . 
S 12 HOH L 5 1019 1019 HOH HOH . 
S 12 HOH L 6 1022 1022 HOH HOH . 
S 12 HOH L 7 1024 1024 HOH HOH . 
S 12 HOH L 8 1025 1025 HOH HOH . 
S 12 HOH L 9 1026 1026 HOH HOH . 
S 12 HOH L 10 1031 1031 HOH HOH . 
S 12 HOH L 11 1036 1036 HOH HOH . 
S 12 HOH L 12 1041 1041 HOH HOH . 
S 12 HOH L 13 1042 1042 HOH HOH . 
S 12 HOH L 14 1043 1043 HOH HOH . 
S 12 HOH L 15 1045 1045 HOH HOH . 
S 12 HOH L 16 1047 1047 HOH HOH . 
S 12 HOH L 17 1049 1049 HOH HOH . 
S 12 HOH L 18 1053 1053 HOH HOH . 
S 12 HOH L 19 1056 1056 HOH HOH . 
S 12 HOH L 20 1058 1058 HOH HOH . 
S 12 HOH L 21 1059 1059 HOH HOH . 
S 12 HOH L 22 1061 1061 HOH HOH . 
S 12 HOH L 23 1062 1062 HOH HOH . 
S 12 HOH L 24 1069 1069 HOH HOH . 
S 12 HOH L 25 1073 1073 HOH HOH . 
S 12 HOH L 26 1074 1074 HOH HOH . 
S 12 HOH L 27 1075 1075 HOH HOH . 
S 12 HOH L 28 1080 1080 HOH HOH . 
S 12 HOH L 29 1081 1081 HOH HOH . 
S 12 HOH L 30 1086 1086 HOH HOH . 
S 12 HOH L 31 1089 1089 HOH HOH . 
S 12 HOH L 32 1091 1091 HOH HOH . 
S 12 HOH L 33 1104 1104 HOH HOH . 
S 12 HOH L 34 1107 1107 HOH HOH . 
S 12 HOH L 35 1108 1108 HOH HOH . 
S 12 HOH L 36 1112 1112 HOH HOH . 
S 12 HOH L 37 1113 1113 HOH HOH . 
S 12 HOH L 38 1117 1117 HOH HOH . 
S 12 HOH L 39 1121 1121 HOH HOH . 
S 12 HOH L 40 1124 1124 HOH HOH . 
T 12 HOH M 1 1003 1003 HOH HOH . 
T 12 HOH M 2 1004 1004 HOH HOH . 
T 12 HOH M 3 1006 1006 HOH HOH . 
T 12 HOH M 4 1008 1008 HOH HOH . 
T 12 HOH M 5 1011 1011 HOH HOH . 
T 12 HOH M 6 1012 1012 HOH HOH . 
T 12 HOH M 7 1013 1013 HOH HOH . 
T 12 HOH M 8 1015 1015 HOH HOH . 
T 12 HOH M 9 1018 1018 HOH HOH . 
T 12 HOH M 10 1021 1021 HOH HOH . 
T 12 HOH M 11 1023 1023 HOH HOH . 
T 12 HOH M 12 1027 1027 HOH HOH . 
T 12 HOH M 13 1029 1029 HOH HOH . 
T 12 HOH M 14 1030 1030 HOH HOH . 
T 12 HOH M 15 1035 1035 HOH HOH . 
T 12 HOH M 16 1037 1037 HOH HOH . 
T 12 HOH M 17 1039 1039 HOH HOH . 
T 12 HOH M 18 1040 1040 HOH HOH . 
T 12 HOH M 19 1046 1046 HOH HOH . 
T 12 HOH M 20 1048 1048 HOH HOH . 
T 12 HOH M 21 1050 1050 HOH HOH . 
T 12 HOH M 22 1054 1054 HOH HOH . 
T 12 HOH M 23 1057 1057 HOH HOH . 
T 12 HOH M 24 1060 1060 HOH HOH . 
T 12 HOH M 25 1063 1063 HOH HOH . 
T 12 HOH M 26 1067 1067 HOH HOH . 
T 12 HOH M 27 1082 1082 HOH HOH . 
T 12 HOH M 28 1084 1084 HOH HOH . 
T 12 HOH M 29 1087 1087 HOH HOH . 
T 12 HOH M 30 1088 1088 HOH HOH . 
T 12 HOH M 31 1093 1093 HOH HOH . 
T 12 HOH M 32 1094 1094 HOH HOH . 
T 12 HOH M 33 1097 1097 HOH HOH . 
T 12 HOH M 34 1098 1098 HOH HOH . 
T 12 HOH M 35 1099 1099 HOH HOH . 
T 12 HOH M 36 1100 1100 HOH HOH . 
T 12 HOH M 37 1101 1101 HOH HOH . 
T 12 HOH M 38 1103 1103 HOH HOH . 
T 12 HOH M 39 1110 1110 HOH HOH . 
T 12 HOH M 40 1115 1115 HOH HOH . 
T 12 HOH M 41 1118 1118 HOH HOH . 
T 12 HOH M 42 1119 1119 HOH HOH . 
T 12 HOH M 43 1125 1125 HOH HOH . 
U 12 HOH H 1 1001 1001 HOH HOH . 
U 12 HOH H 2 1002 1002 HOH HOH . 
U 12 HOH H 3 1005 1005 HOH HOH . 
U 12 HOH H 4 1010 1010 HOH HOH . 
U 12 HOH H 5 1014 1014 HOH HOH . 
U 12 HOH H 6 1020 1020 HOH HOH . 
U 12 HOH H 7 1028 1028 HOH HOH . 
U 12 HOH H 8 1032 1032 HOH HOH . 
U 12 HOH H 9 1033 1033 HOH HOH . 
U 12 HOH H 10 1034 1034 HOH HOH . 
U 12 HOH H 11 1038 1038 HOH HOH . 
U 12 HOH H 12 1044 1044 HOH HOH . 
U 12 HOH H 13 1051 1051 HOH HOH . 
U 12 HOH H 14 1052 1052 HOH HOH . 
U 12 HOH H 15 1055 1055 HOH HOH . 
U 12 HOH H 16 1064 1064 HOH HOH . 
U 12 HOH H 17 1065 1065 HOH HOH . 
U 12 HOH H 18 1066 1066 HOH HOH . 
U 12 HOH H 19 1068 1068 HOH HOH . 
U 12 HOH H 20 1070 1070 HOH HOH . 
U 12 HOH H 21 1071 1071 HOH HOH . 
U 12 HOH H 22 1072 1072 HOH HOH . 
U 12 HOH H 23 1076 1076 HOH HOH . 
U 12 HOH H 24 1077 1077 HOH HOH . 
U 12 HOH H 25 1078 1078 HOH HOH . 
U 12 HOH H 26 1079 1079 HOH HOH . 
U 12 HOH H 27 1083 1083 HOH HOH . 
U 12 HOH H 28 1085 1085 HOH HOH . 
U 12 HOH H 29 1090 1090 HOH HOH . 
U 12 HOH H 30 1092 1092 HOH HOH . 
U 12 HOH H 31 1095 1095 HOH HOH . 
U 12 HOH H 32 1096 1096 HOH HOH . 
U 12 HOH H 33 1102 1102 HOH HOH . 
U 12 HOH H 34 1105 1105 HOH HOH . 
U 12 HOH H 35 1106 1106 HOH HOH . 
U 12 HOH H 36 1109 1109 HOH HOH . 
U 12 HOH H 37 1111 1111 HOH HOH . 
U 12 HOH H 38 1114 1114 HOH HOH . 
U 12 HOH H 39 1116 1116 HOH HOH . 
U 12 HOH H 40 1120 1120 HOH HOH . 
U 12 HOH H 41 1122 1122 HOH HOH . 
U 12 HOH H 42 1123 1123 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 LDA . . . R 10 -6.478 65.376 36.457 1 77.72 ? N1 LDA 862 H 1 
HETATM 2 O O1 LDA . . . R 10 -7.169 64.384 36.114 1 79.41 ? O1 LDA 862 H 1 
HETATM 3 C CM1 LDA . . . R 10 -5.718 65.857 35.304 1 78.96 ? CM1 LDA 862 H 1 
HETATM 4 C CM2 LDA . . . R 10 -7.293 66.519 36.712 1 77.49 ? CM2 LDA 862 H 1 
HETATM 5 C C1 LDA . . . R 10 -5.405 65.112 37.469 1 77.21 ? C1 LDA 862 H 1 
HETATM 6 C C2 LDA . . . R 10 -5.245 63.651 37.989 1 74.4 ? C2 LDA 862 H 1 
HETATM 7 C C3 LDA . . . R 10 -4.066 63.636 39.015 1 72.07 ? C3 LDA 862 H 1 
HETATM 8 C C4 LDA . . . R 10 -4.355 62.619 40.098 1 69.04 ? C4 LDA 862 H 1 
HETATM 9 C C5 LDA . . . R 10 -3.191 62.465 41.053 1 67.21 ? C5 LDA 862 H 1 
HETATM 10 C C6 LDA . . . R 10 -3.667 61.406 42.071 1 66.52 ? C6 LDA 862 H 1 
HETATM 11 C C7 LDA . . . R 10 -2.63 61.311 43.19 1 66.76 ? C7 LDA 862 H 1 
HETATM 12 C C8 LDA . . . R 10 -3.043 60.268 44.253 1 66.96 ? C8 LDA 862 H 1 
HETATM 13 C C9 LDA . . . R 10 -3.042 61.093 45.533 1 67.93 ? C9 LDA 862 H 1 
HETATM 14 C C10 LDA . . . R 10 -3.438 60.24 46.744 1 67.68 ? C10 LDA 862 H 1 
HETATM 15 C C11 LDA . . . R 10 -2.18 59.485 47.166 1 67.19 ? C11 LDA 862 H 1 
HETATM 16 C C12 LDA . . . R 10 -2.065 59.512 48.681 1 68.74 ? C12 LDA 862 H 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           16 
#