data_1RVJ # _model_server_result.job_id e75i8v1f8-2cc5GnNjZP1g _model_server_result.datetime_utc '2024-11-28 12:21:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rvj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":864}' # _entry.id 1RVJ # _exptl.entry_id 1RVJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1RVJ _cell.length_a 138.242 _cell.length_b 138.242 _cell.length_c 184.396 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RVJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 190 L HIS 190 1_555 H FE FE2 . M FE2 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc2 A NE2 HIS 230 L HIS 230 1_555 H FE FE2 . M FE2 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc3 B NE2 HIS 219 M HIS 219 1_555 H FE FE2 . M FE2 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc4 B OE2 GLU 234 M GLU 234 1_555 H FE FE2 . M FE2 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc5 B OE1 GLU 234 M GLU 234 1_555 H FE FE2 . M FE2 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc6 B NE2 HIS 266 M HIS 266 1_555 H FE FE2 . M FE2 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 855 n n P O2 PO4 sing 856 n n P O3 PO4 sing 857 n n P O4 PO4 sing 858 n n # _atom_sites.entry_id 1RVJ _atom_sites.fract_transf_matrix[1][1] 0.007234 _atom_sites.fract_transf_matrix[1][2] 0.004176 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008353 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005423 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BCL L 1 851 851 BCL BCL . E 4 BCL L 1 852 852 BCL BCL . F 5 BPH L 1 856 856 BPH BPH . G 6 U10 L 1 859 859 U10 U10 . H 7 FE2 M 1 857 857 FE2 FE . I 8 PO4 M 1 864 864 PO4 PO4 . J 4 BCL M 1 853 853 BCL BCL . K 4 BCL M 1 854 854 BCL BCL . L 5 BPH M 1 855 855 BPH BPH . M 6 U10 M 1 858 858 U10 U10 . N 9 SPO M 1 860 860 SPO SPO . O 10 LDA M 1 861 861 LDA LDA . P 10 LDA M 1 863 863 LDA LDA . Q 11 CDL M 1 900 900 CDL CDL . R 10 LDA H 1 862 862 LDA LDA . S 12 HOH L 1 1007 1007 HOH HOH . S 12 HOH L 2 1009 1009 HOH HOH . S 12 HOH L 3 1016 1016 HOH HOH . S 12 HOH L 4 1017 1017 HOH HOH . S 12 HOH L 5 1019 1019 HOH HOH . S 12 HOH L 6 1022 1022 HOH HOH . S 12 HOH L 7 1024 1024 HOH HOH . S 12 HOH L 8 1025 1025 HOH HOH . S 12 HOH L 9 1026 1026 HOH HOH . S 12 HOH L 10 1031 1031 HOH HOH . S 12 HOH L 11 1036 1036 HOH HOH . S 12 HOH L 12 1041 1041 HOH HOH . S 12 HOH L 13 1042 1042 HOH HOH . S 12 HOH L 14 1043 1043 HOH HOH . S 12 HOH L 15 1045 1045 HOH HOH . S 12 HOH L 16 1047 1047 HOH HOH . S 12 HOH L 17 1049 1049 HOH HOH . S 12 HOH L 18 1053 1053 HOH HOH . S 12 HOH L 19 1056 1056 HOH HOH . S 12 HOH L 20 1058 1058 HOH HOH . S 12 HOH L 21 1059 1059 HOH HOH . S 12 HOH L 22 1061 1061 HOH HOH . S 12 HOH L 23 1062 1062 HOH HOH . S 12 HOH L 24 1069 1069 HOH HOH . S 12 HOH L 25 1073 1073 HOH HOH . S 12 HOH L 26 1074 1074 HOH HOH . S 12 HOH L 27 1075 1075 HOH HOH . S 12 HOH L 28 1080 1080 HOH HOH . S 12 HOH L 29 1081 1081 HOH HOH . S 12 HOH L 30 1086 1086 HOH HOH . S 12 HOH L 31 1089 1089 HOH HOH . S 12 HOH L 32 1091 1091 HOH HOH . S 12 HOH L 33 1104 1104 HOH HOH . S 12 HOH L 34 1107 1107 HOH HOH . S 12 HOH L 35 1108 1108 HOH HOH . S 12 HOH L 36 1112 1112 HOH HOH . S 12 HOH L 37 1113 1113 HOH HOH . S 12 HOH L 38 1117 1117 HOH HOH . S 12 HOH L 39 1121 1121 HOH HOH . S 12 HOH L 40 1124 1124 HOH HOH . T 12 HOH M 1 1003 1003 HOH HOH . T 12 HOH M 2 1004 1004 HOH HOH . T 12 HOH M 3 1006 1006 HOH HOH . T 12 HOH M 4 1008 1008 HOH HOH . T 12 HOH M 5 1011 1011 HOH HOH . T 12 HOH M 6 1012 1012 HOH HOH . T 12 HOH M 7 1013 1013 HOH HOH . T 12 HOH M 8 1015 1015 HOH HOH . T 12 HOH M 9 1018 1018 HOH HOH . T 12 HOH M 10 1021 1021 HOH HOH . T 12 HOH M 11 1023 1023 HOH HOH . T 12 HOH M 12 1027 1027 HOH HOH . T 12 HOH M 13 1029 1029 HOH HOH . T 12 HOH M 14 1030 1030 HOH HOH . T 12 HOH M 15 1035 1035 HOH HOH . T 12 HOH M 16 1037 1037 HOH HOH . T 12 HOH M 17 1039 1039 HOH HOH . T 12 HOH M 18 1040 1040 HOH HOH . T 12 HOH M 19 1046 1046 HOH HOH . T 12 HOH M 20 1048 1048 HOH HOH . T 12 HOH M 21 1050 1050 HOH HOH . T 12 HOH M 22 1054 1054 HOH HOH . T 12 HOH M 23 1057 1057 HOH HOH . T 12 HOH M 24 1060 1060 HOH HOH . T 12 HOH M 25 1063 1063 HOH HOH . T 12 HOH M 26 1067 1067 HOH HOH . T 12 HOH M 27 1082 1082 HOH HOH . T 12 HOH M 28 1084 1084 HOH HOH . T 12 HOH M 29 1087 1087 HOH HOH . T 12 HOH M 30 1088 1088 HOH HOH . T 12 HOH M 31 1093 1093 HOH HOH . T 12 HOH M 32 1094 1094 HOH HOH . T 12 HOH M 33 1097 1097 HOH HOH . T 12 HOH M 34 1098 1098 HOH HOH . T 12 HOH M 35 1099 1099 HOH HOH . T 12 HOH M 36 1100 1100 HOH HOH . T 12 HOH M 37 1101 1101 HOH HOH . T 12 HOH M 38 1103 1103 HOH HOH . T 12 HOH M 39 1110 1110 HOH HOH . T 12 HOH M 40 1115 1115 HOH HOH . T 12 HOH M 41 1118 1118 HOH HOH . T 12 HOH M 42 1119 1119 HOH HOH . T 12 HOH M 43 1125 1125 HOH HOH . U 12 HOH H 1 1001 1001 HOH HOH . U 12 HOH H 2 1002 1002 HOH HOH . U 12 HOH H 3 1005 1005 HOH HOH . U 12 HOH H 4 1010 1010 HOH HOH . U 12 HOH H 5 1014 1014 HOH HOH . U 12 HOH H 6 1020 1020 HOH HOH . U 12 HOH H 7 1028 1028 HOH HOH . U 12 HOH H 8 1032 1032 HOH HOH . U 12 HOH H 9 1033 1033 HOH HOH . U 12 HOH H 10 1034 1034 HOH HOH . U 12 HOH H 11 1038 1038 HOH HOH . U 12 HOH H 12 1044 1044 HOH HOH . U 12 HOH H 13 1051 1051 HOH HOH . U 12 HOH H 14 1052 1052 HOH HOH . U 12 HOH H 15 1055 1055 HOH HOH . U 12 HOH H 16 1064 1064 HOH HOH . U 12 HOH H 17 1065 1065 HOH HOH . U 12 HOH H 18 1066 1066 HOH HOH . U 12 HOH H 19 1068 1068 HOH HOH . U 12 HOH H 20 1070 1070 HOH HOH . U 12 HOH H 21 1071 1071 HOH HOH . U 12 HOH H 22 1072 1072 HOH HOH . U 12 HOH H 23 1076 1076 HOH HOH . U 12 HOH H 24 1077 1077 HOH HOH . U 12 HOH H 25 1078 1078 HOH HOH . U 12 HOH H 26 1079 1079 HOH HOH . U 12 HOH H 27 1083 1083 HOH HOH . U 12 HOH H 28 1085 1085 HOH HOH . U 12 HOH H 29 1090 1090 HOH HOH . U 12 HOH H 30 1092 1092 HOH HOH . U 12 HOH H 31 1095 1095 HOH HOH . U 12 HOH H 32 1096 1096 HOH HOH . U 12 HOH H 33 1102 1102 HOH HOH . U 12 HOH H 34 1105 1105 HOH HOH . U 12 HOH H 35 1106 1106 HOH HOH . U 12 HOH H 36 1109 1109 HOH HOH . U 12 HOH H 37 1111 1111 HOH HOH . U 12 HOH H 38 1114 1114 HOH HOH . U 12 HOH H 39 1116 1116 HOH HOH . U 12 HOH H 40 1120 1120 HOH HOH . U 12 HOH H 41 1122 1122 HOH HOH . U 12 HOH H 42 1123 1123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . I 8 -32.149 29.965 60.301 1 93.92 ? P PO4 864 M 1 HETATM 2 O O1 PO4 . . . I 8 -31.54 28.618 60.151 1 93.15 ? O1 PO4 864 M 1 HETATM 3 O O2 PO4 . . . I 8 -31.091 31.005 60.164 1 94.63 ? O2 PO4 864 M 1 HETATM 4 O O3 PO4 . . . I 8 -33.179 30.164 59.248 1 94.19 ? O3 PO4 864 M 1 HETATM 5 O O4 PO4 . . . I 8 -32.783 30.076 61.639 1 91.6 ? O4 PO4 864 M 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #