data_1RWQ # _model_server_result.job_id Oa_jtMFZQetvJQZrKDgwIA _model_server_result.datetime_utc '2024-11-04 20:55:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rwq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":795}' # _entry.id 1RWQ # _exptl.entry_id 1RWQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1RWQ _cell.length_a 65.676 _cell.length_b 69.141 _cell.length_c 422.559 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RWQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 290 A CYS 328 1_555 A SG CYS 301 A CYS 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? disulf ? disulf2 A SG CYS 347 A CYS 385 1_555 A SG CYS 356 A CYS 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf3 A SG CYS 406 A CYS 444 1_555 A SG CYS 409 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 A SG CYS 416 A CYS 454 1_555 A SG CYS 434 A CYS 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? disulf ? disulf5 A SG CYS 611 A CYS 649 1_555 A SG CYS 724 A CYS 762 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? disulf ? disulf6 B SG CYS 290 B CYS 328 1_555 B SG CYS 301 B CYS 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? disulf ? disulf7 B SG CYS 347 B CYS 385 1_555 B SG CYS 356 B CYS 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? disulf ? disulf8 B SG CYS 406 B CYS 444 1_555 B SG CYS 409 B CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf9 B SG CYS 416 B CYS 454 1_555 B SG CYS 434 B CYS 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? disulf ? disulf10 B SG CYS 611 B CYS 649 1_555 B SG CYS 724 B CYS 762 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? covale ? covale1 A ND2 ASN 47 A ASN 85 1_555 D C1 NAG . A NAG 794 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 ? covale ? covale2 A ND2 ASN 112 A ASN 150 1_555 C C1 NAG . A NAG 793 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale3 A ND2 ASN 191 A ASN 229 1_555 F C1 NAG . A NAG 796 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale4 A ND2 ASN 243 A ASN 281 1_555 E C1 NAG . A NAG 795 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale5 B ND2 ASN 47 B ASN 85 1_555 I C1 NAG . B NAG 794 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale6 B OG SER 49 B SER 87 1_555 I O7 NAG . B NAG 794 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? covale ? covale7 B ND2 ASN 54 B ASN 92 1_555 K C1 NAG . B NAG 797 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? covale ? covale8 B ND2 ASN 112 B ASN 150 1_555 H C1 NAG . B NAG 793 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? covale ? covale9 B ND2 ASN 191 B ASN 229 1_555 J C1 NAG . B NAG 796 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms ? # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 1RWQ _atom_sites.fract_transf_matrix[1][1] 0.015226 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014463 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002367 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG A 1 793 793 NAG NAG . D 2 NAG A 1 794 794 NAG NAG . E 2 NAG A 1 795 795 NAG NAG . F 2 NAG A 1 796 796 NAG NAG . G 3 5AP A 1 900 900 5AP AP1 . H 2 NAG B 1 793 793 NAG NAG . I 2 NAG B 1 794 794 NAG NAG . J 2 NAG B 1 796 796 NAG NAG . K 2 NAG B 1 797 797 NAG NAG . L 3 5AP B 1 1900 900 5AP AP1 . M 4 HOH A 1 901 10 HOH HOH . M 4 HOH A 2 902 11 HOH HOH . M 4 HOH A 3 903 12 HOH HOH . M 4 HOH A 4 904 13 HOH HOH . M 4 HOH A 5 905 14 HOH HOH . M 4 HOH A 6 906 15 HOH HOH . M 4 HOH A 7 907 16 HOH HOH . M 4 HOH A 8 908 17 HOH HOH . M 4 HOH A 9 909 18 HOH HOH . M 4 HOH A 10 910 20 HOH HOH . M 4 HOH A 11 911 21 HOH HOH . M 4 HOH A 12 912 26 HOH HOH . M 4 HOH A 13 913 27 HOH HOH . M 4 HOH A 14 914 28 HOH HOH . M 4 HOH A 15 915 29 HOH HOH . M 4 HOH A 16 916 30 HOH HOH . M 4 HOH A 17 917 31 HOH HOH . M 4 HOH A 18 918 32 HOH HOH . M 4 HOH A 19 919 33 HOH HOH . M 4 HOH A 20 920 34 HOH HOH . M 4 HOH A 21 921 35 HOH HOH . M 4 HOH A 22 922 36 HOH HOH . M 4 HOH A 23 923 37 HOH HOH . M 4 HOH A 24 924 38 HOH HOH . M 4 HOH A 25 925 39 HOH HOH . M 4 HOH A 26 926 40 HOH HOH . M 4 HOH A 27 927 41 HOH HOH . M 4 HOH A 28 928 42 HOH HOH . M 4 HOH A 29 929 43 HOH HOH . M 4 HOH A 30 930 44 HOH HOH . M 4 HOH A 31 931 45 HOH HOH . M 4 HOH A 32 932 46 HOH HOH . M 4 HOH A 33 933 47 HOH HOH . M 4 HOH A 34 934 48 HOH HOH . M 4 HOH A 35 935 72 HOH HOH . M 4 HOH A 36 936 74 HOH HOH . M 4 HOH A 37 937 75 HOH HOH . M 4 HOH A 38 938 76 HOH HOH . M 4 HOH A 39 939 77 HOH HOH . M 4 HOH A 40 940 78 HOH HOH . M 4 HOH A 41 941 79 HOH HOH . M 4 HOH A 42 942 80 HOH HOH . M 4 HOH A 43 943 81 HOH HOH . M 4 HOH A 44 944 82 HOH HOH . M 4 HOH A 45 945 96 HOH HOH . M 4 HOH A 46 946 97 HOH HOH . M 4 HOH A 47 947 98 HOH HOH . N 4 HOH B 1 1901 1 HOH HOH . N 4 HOH B 2 1902 2 HOH HOH . N 4 HOH B 3 1903 3 HOH HOH . N 4 HOH B 4 1904 4 HOH HOH . N 4 HOH B 5 1905 5 HOH HOH . N 4 HOH B 6 1906 6 HOH HOH . N 4 HOH B 7 1907 7 HOH HOH . N 4 HOH B 8 1908 8 HOH HOH . N 4 HOH B 9 1909 9 HOH HOH . N 4 HOH B 10 1910 19 HOH HOH . N 4 HOH B 11 1911 22 HOH HOH . N 4 HOH B 12 1912 23 HOH HOH . N 4 HOH B 13 1913 24 HOH HOH . N 4 HOH B 14 1914 25 HOH HOH . N 4 HOH B 15 1915 49 HOH HOH . N 4 HOH B 16 1916 50 HOH HOH . N 4 HOH B 17 1917 51 HOH HOH . N 4 HOH B 18 1918 52 HOH HOH . N 4 HOH B 19 1919 53 HOH HOH . N 4 HOH B 20 1920 54 HOH HOH . N 4 HOH B 21 1921 55 HOH HOH . N 4 HOH B 22 1922 56 HOH HOH . N 4 HOH B 23 1923 57 HOH HOH . N 4 HOH B 24 1924 58 HOH HOH . N 4 HOH B 25 1925 59 HOH HOH . N 4 HOH B 26 1926 60 HOH HOH . N 4 HOH B 27 1927 61 HOH HOH . N 4 HOH B 28 1928 62 HOH HOH . N 4 HOH B 29 1929 63 HOH HOH . N 4 HOH B 30 1930 64 HOH HOH . N 4 HOH B 31 1931 65 HOH HOH . N 4 HOH B 32 1932 66 HOH HOH . N 4 HOH B 33 1933 67 HOH HOH . N 4 HOH B 34 1934 68 HOH HOH . N 4 HOH B 35 1935 69 HOH HOH . N 4 HOH B 36 1936 70 HOH HOH . N 4 HOH B 37 1937 71 HOH HOH . N 4 HOH B 38 1938 73 HOH HOH . N 4 HOH B 39 1939 83 HOH HOH . N 4 HOH B 40 1940 84 HOH HOH . N 4 HOH B 41 1941 85 HOH HOH . N 4 HOH B 42 1942 86 HOH HOH . N 4 HOH B 43 1943 87 HOH HOH . N 4 HOH B 44 1944 88 HOH HOH . N 4 HOH B 45 1945 89 HOH HOH . N 4 HOH B 46 1946 90 HOH HOH . N 4 HOH B 47 1947 91 HOH HOH . N 4 HOH B 48 1948 92 HOH HOH . N 4 HOH B 49 1949 93 HOH HOH . N 4 HOH B 50 1950 94 HOH HOH . N 4 HOH B 51 1951 95 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . E 2 27.12 84.147 27.224 1 78.21 ? C1 NAG 795 A 1 HETATM 2 C C2 NAG . . . E 2 26.851 85.29 28.219 1 80.68 ? C2 NAG 795 A 1 HETATM 3 C C3 NAG . . . E 2 27.293 84.87 29.606 1 80.46 ? C3 NAG 795 A 1 HETATM 4 C C4 NAG . . . E 2 26.326 83.748 29.968 1 82.09 ? C4 NAG 795 A 1 HETATM 5 C C5 NAG . . . E 2 26.541 82.585 28.994 1 83.31 ? C5 NAG 795 A 1 HETATM 6 C C6 NAG . . . E 2 25.584 81.409 29.261 1 85.02 ? C6 NAG 795 A 1 HETATM 7 C C7 NAG . . . E 2 26.739 87.161 26.736 1 79.71 ? C7 NAG 795 A 1 HETATM 8 C C8 NAG . . . E 2 27.629 87.879 25.766 1 79.25 ? C8 NAG 795 A 1 HETATM 9 N N2 NAG . . . E 2 27.328 86.616 27.809 1 79.17 ? N2 NAG 795 A 1 HETATM 10 O O3 NAG . . . E 2 27.149 85.974 30.456 1 79.62 ? O3 NAG 795 A 1 HETATM 11 O O4 NAG . . . E 2 26.473 83.331 31.31 1 82.38 ? O4 NAG 795 A 1 HETATM 12 O O5 NAG . . . E 2 26.399 83.012 27.646 1 81.77 ? O5 NAG 795 A 1 HETATM 13 O O6 NAG . . . E 2 25.22 80.727 28.067 1 86.14 ? O6 NAG 795 A 1 HETATM 14 O O7 NAG . . . E 2 25.521 87.058 26.498 1 80.17 ? O7 NAG 795 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #