data_1S19 # _model_server_result.job_id JUsZBexRVfzTwBSNJaQtOQ _model_server_result.datetime_utc '2024-12-21 14:02:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1s19 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 1S19 # _exptl.entry_id 1S19 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 412.605 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CALCIPOTRIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1S19 _cell.length_a 45.248 _cell.length_b 52.55 _cell.length_c 132.909 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1S19 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H40 O3' _chem_comp.formula_weight 412.605 _chem_comp.id MC9 _chem_comp.mon_nstd_flag . _chem_comp.name CALCIPOTRIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(1S,5Z,7Z,17ALPHA,22E)-24-CYCLOPROPYL-9,10-SECOCHOLA-5,7,10,22-TETRAENE-1,3,24-TRIOL;1-ALPHA,24S-(OH)2-22-ENE-26,27-DEHYDROVITAMIN D3' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C3 MC9 sing 218 n n O2 HO2 MC9 sing 219 n n O1 C1 MC9 sing 220 n n O1 HO1 MC9 sing 221 n n C1 C2 MC9 sing 222 n n C1 C10 MC9 sing 223 n n C1 H1 MC9 sing 224 n n C2 C3 MC9 sing 225 n n C2 H21 MC9 sing 226 n n C2 H22A MC9 sing 227 n n C3 C4 MC9 sing 228 n n C3 H3 MC9 sing 229 n n C4 C5 MC9 sing 230 n n C4 H41 MC9 sing 231 n n C4 H42 MC9 sing 232 n n C5 C6 MC9 doub 233 z n C5 C10 MC9 sing 234 n n C6 C7 MC9 sing 235 n n C6 H6 MC9 sing 236 n n C7 C8 MC9 doub 237 e n C7 H7 MC9 sing 238 n n C8 C9 MC9 sing 239 n n C8 C14 MC9 sing 240 n n C9 C11 MC9 sing 241 n n C9 H91 MC9 sing 242 n n C9 H92 MC9 sing 243 n n C10 C19 MC9 doub 244 n n C11 C12 MC9 sing 245 n n C11 H111 MC9 sing 246 n n C11 H112 MC9 sing 247 n n C12 C13 MC9 sing 248 n n C12 H121 MC9 sing 249 n n C12 H122 MC9 sing 250 n n C13 C14 MC9 sing 251 n n C13 C17 MC9 sing 252 n n C13 C18 MC9 sing 253 n n C14 C15 MC9 sing 254 n n C14 H14 MC9 sing 255 n n C15 C16 MC9 sing 256 n n C15 H151 MC9 sing 257 n n C15 H152 MC9 sing 258 n n C16 C17 MC9 sing 259 n n C16 H161 MC9 sing 260 n n C16 H162 MC9 sing 261 n n C17 C20 MC9 sing 262 n n C17 H17 MC9 sing 263 n n C18 H181 MC9 sing 264 n n C18 H182 MC9 sing 265 n n C18 H183 MC9 sing 266 n n C19 H191 MC9 sing 267 n n C19 H192 MC9 sing 268 n n C20 C22 MC9 sing 269 n n C20 C21 MC9 sing 270 n n C20 H20 MC9 sing 271 n n C22 C23 MC9 doub 272 e n C22 H22 MC9 sing 273 n n C24 C25 MC9 sing 274 n n C24 O3 MC9 sing 275 n n C24 C23 MC9 sing 276 n n C24 H24 MC9 sing 277 n n C21 H211 MC9 sing 278 n n C21 H212 MC9 sing 279 n n C21 H213 MC9 sing 280 n n C25 C26 MC9 sing 281 n n C25 C27 MC9 sing 282 n n C25 H25 MC9 sing 283 n n C26 C27 MC9 sing 284 n n C26 H261 MC9 sing 285 n n C26 H262 MC9 sing 286 n n C27 H271 MC9 sing 287 n n C27 H272 MC9 sing 288 n n O3 HO3 MC9 sing 289 n n C23 H23 MC9 sing 290 n n # _atom_sites.entry_id 1S19 _atom_sites.fract_transf_matrix[1][1] 0.0221 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019029 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007524 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MC9 A 1 500 500 MC9 MC9 . C 3 HOH A 1 501 501 HOH TIP . C 3 HOH A 2 502 502 HOH TIP . C 3 HOH A 3 503 503 HOH TIP . C 3 HOH A 4 504 504 HOH TIP . C 3 HOH A 5 505 505 HOH TIP . C 3 HOH A 6 506 506 HOH TIP . C 3 HOH A 7 507 507 HOH TIP . C 3 HOH A 8 508 508 HOH TIP . C 3 HOH A 9 509 509 HOH TIP . C 3 HOH A 10 510 510 HOH TIP . C 3 HOH A 11 511 511 HOH TIP . C 3 HOH A 12 512 512 HOH TIP . C 3 HOH A 13 513 513 HOH TIP . C 3 HOH A 14 514 514 HOH TIP . C 3 HOH A 15 515 515 HOH TIP . C 3 HOH A 16 516 516 HOH TIP . C 3 HOH A 17 517 517 HOH TIP . C 3 HOH A 18 518 518 HOH TIP . C 3 HOH A 19 519 519 HOH TIP . C 3 HOH A 20 520 520 HOH TIP . C 3 HOH A 21 521 521 HOH TIP . C 3 HOH A 22 522 522 HOH TIP . C 3 HOH A 23 523 523 HOH TIP . C 3 HOH A 24 524 524 HOH TIP . C 3 HOH A 25 525 525 HOH TIP . C 3 HOH A 26 526 526 HOH TIP . C 3 HOH A 27 527 527 HOH TIP . C 3 HOH A 28 528 528 HOH TIP . C 3 HOH A 29 529 529 HOH TIP . C 3 HOH A 30 530 530 HOH TIP . C 3 HOH A 31 531 531 HOH TIP . C 3 HOH A 32 532 532 HOH TIP . C 3 HOH A 33 533 533 HOH TIP . C 3 HOH A 34 534 534 HOH TIP . C 3 HOH A 35 535 535 HOH TIP . C 3 HOH A 36 536 536 HOH TIP . C 3 HOH A 37 537 537 HOH TIP . C 3 HOH A 38 538 538 HOH TIP . C 3 HOH A 39 539 539 HOH TIP . C 3 HOH A 40 540 540 HOH TIP . C 3 HOH A 41 541 541 HOH TIP . C 3 HOH A 42 542 542 HOH TIP . C 3 HOH A 43 543 543 HOH TIP . C 3 HOH A 44 544 544 HOH TIP . C 3 HOH A 45 545 545 HOH TIP . C 3 HOH A 46 546 546 HOH TIP . C 3 HOH A 47 547 547 HOH TIP . C 3 HOH A 48 548 548 HOH TIP . C 3 HOH A 49 549 549 HOH TIP . C 3 HOH A 50 550 550 HOH TIP . C 3 HOH A 51 551 551 HOH TIP . C 3 HOH A 52 552 552 HOH TIP . C 3 HOH A 53 553 553 HOH TIP . C 3 HOH A 54 554 554 HOH TIP . C 3 HOH A 55 555 555 HOH TIP . C 3 HOH A 56 556 556 HOH TIP . C 3 HOH A 57 557 557 HOH TIP . C 3 HOH A 58 558 558 HOH TIP . C 3 HOH A 59 559 559 HOH TIP . C 3 HOH A 60 560 560 HOH TIP . C 3 HOH A 61 561 561 HOH TIP . C 3 HOH A 62 562 562 HOH TIP . C 3 HOH A 63 563 563 HOH TIP . C 3 HOH A 64 564 564 HOH TIP . C 3 HOH A 65 565 565 HOH TIP . C 3 HOH A 66 566 566 HOH TIP . C 3 HOH A 67 567 567 HOH TIP . C 3 HOH A 68 568 568 HOH TIP . C 3 HOH A 69 569 569 HOH TIP . C 3 HOH A 70 570 570 HOH TIP . C 3 HOH A 71 571 571 HOH TIP . C 3 HOH A 72 572 572 HOH TIP . C 3 HOH A 73 573 573 HOH TIP . C 3 HOH A 74 574 574 HOH TIP . C 3 HOH A 75 575 575 HOH TIP . C 3 HOH A 76 576 576 HOH TIP . C 3 HOH A 77 577 577 HOH TIP . C 3 HOH A 78 578 578 HOH TIP . C 3 HOH A 79 579 579 HOH TIP . C 3 HOH A 80 580 580 HOH TIP . C 3 HOH A 81 581 581 HOH TIP . C 3 HOH A 82 582 582 HOH TIP . C 3 HOH A 83 583 583 HOH TIP . C 3 HOH A 84 584 584 HOH TIP . C 3 HOH A 85 585 585 HOH TIP . C 3 HOH A 86 586 586 HOH TIP . C 3 HOH A 87 587 587 HOH TIP . C 3 HOH A 88 588 588 HOH TIP . C 3 HOH A 89 589 589 HOH TIP . C 3 HOH A 90 590 590 HOH TIP . C 3 HOH A 91 591 591 HOH TIP . C 3 HOH A 92 592 592 HOH TIP . C 3 HOH A 93 593 593 HOH TIP . C 3 HOH A 94 594 594 HOH TIP . C 3 HOH A 95 595 595 HOH TIP . C 3 HOH A 96 596 596 HOH TIP . C 3 HOH A 97 597 597 HOH TIP . C 3 HOH A 98 598 598 HOH TIP . C 3 HOH A 99 599 599 HOH TIP . C 3 HOH A 100 600 600 HOH TIP . C 3 HOH A 101 601 601 HOH TIP . C 3 HOH A 102 602 602 HOH TIP . C 3 HOH A 103 603 603 HOH TIP . C 3 HOH A 104 604 604 HOH TIP . C 3 HOH A 105 605 605 HOH TIP . C 3 HOH A 106 606 606 HOH TIP . C 3 HOH A 107 607 607 HOH TIP . C 3 HOH A 108 608 608 HOH TIP . C 3 HOH A 109 609 609 HOH TIP . C 3 HOH A 110 610 610 HOH TIP . C 3 HOH A 111 611 611 HOH TIP . C 3 HOH A 112 612 612 HOH TIP . C 3 HOH A 113 613 613 HOH TIP . C 3 HOH A 114 614 614 HOH TIP . C 3 HOH A 115 615 615 HOH TIP . C 3 HOH A 116 616 616 HOH TIP . C 3 HOH A 117 617 617 HOH TIP . C 3 HOH A 118 618 618 HOH TIP . C 3 HOH A 119 619 619 HOH TIP . C 3 HOH A 120 620 620 HOH TIP . C 3 HOH A 121 621 621 HOH TIP . C 3 HOH A 122 622 622 HOH TIP . C 3 HOH A 123 623 623 HOH TIP . C 3 HOH A 124 624 624 HOH TIP . C 3 HOH A 125 625 625 HOH TIP . C 3 HOH A 126 626 626 HOH TIP . C 3 HOH A 127 627 627 HOH TIP . C 3 HOH A 128 628 628 HOH TIP . C 3 HOH A 129 629 629 HOH TIP . C 3 HOH A 130 630 630 HOH TIP . C 3 HOH A 131 631 631 HOH TIP . C 3 HOH A 132 632 632 HOH TIP . C 3 HOH A 133 633 633 HOH TIP . C 3 HOH A 134 634 634 HOH TIP . C 3 HOH A 135 635 635 HOH TIP . C 3 HOH A 136 636 636 HOH TIP . C 3 HOH A 137 637 637 HOH TIP . C 3 HOH A 138 638 638 HOH TIP . C 3 HOH A 139 639 639 HOH TIP . C 3 HOH A 140 640 640 HOH TIP . C 3 HOH A 141 641 641 HOH TIP . C 3 HOH A 142 642 642 HOH TIP . C 3 HOH A 143 643 643 HOH TIP . C 3 HOH A 144 644 644 HOH TIP . C 3 HOH A 145 645 645 HOH TIP . C 3 HOH A 146 646 646 HOH TIP . C 3 HOH A 147 647 647 HOH TIP . C 3 HOH A 148 648 648 HOH TIP . C 3 HOH A 149 649 649 HOH TIP . C 3 HOH A 150 650 650 HOH TIP . C 3 HOH A 151 651 651 HOH TIP . C 3 HOH A 152 652 652 HOH TIP . C 3 HOH A 153 653 653 HOH TIP . C 3 HOH A 154 654 654 HOH TIP . C 3 HOH A 155 655 655 HOH TIP . C 3 HOH A 156 656 656 HOH TIP . C 3 HOH A 157 657 657 HOH TIP . C 3 HOH A 158 658 658 HOH TIP . C 3 HOH A 159 659 659 HOH TIP . C 3 HOH A 160 660 660 HOH TIP . C 3 HOH A 161 661 661 HOH TIP . C 3 HOH A 162 662 662 HOH TIP . C 3 HOH A 163 663 663 HOH TIP . C 3 HOH A 164 664 664 HOH TIP . C 3 HOH A 165 665 665 HOH TIP . C 3 HOH A 166 666 666 HOH TIP . C 3 HOH A 167 667 667 HOH TIP . C 3 HOH A 168 668 668 HOH TIP . C 3 HOH A 169 669 669 HOH TIP . C 3 HOH A 170 670 670 HOH TIP . C 3 HOH A 171 671 671 HOH TIP . C 3 HOH A 172 672 672 HOH TIP . C 3 HOH A 173 673 673 HOH TIP . C 3 HOH A 174 674 674 HOH TIP . C 3 HOH A 175 675 675 HOH TIP . C 3 HOH A 176 676 676 HOH TIP . C 3 HOH A 177 677 677 HOH TIP . C 3 HOH A 178 678 678 HOH TIP . C 3 HOH A 179 679 679 HOH TIP . C 3 HOH A 180 680 680 HOH TIP . C 3 HOH A 181 681 681 HOH TIP . C 3 HOH A 182 682 682 HOH TIP . C 3 HOH A 183 683 683 HOH TIP . C 3 HOH A 184 684 684 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 MC9 . . . B 2 17.096 18.159 34.784 1 10.8 ? O2 MC9 500 A 1 HETATM 2 O O1 MC9 . . . B 2 13.126 17.454 36.535 1 10.65 ? O1 MC9 500 A 1 HETATM 3 C C1 MC9 . . . B 2 14.181 18.037 35.698 1 9.36 ? C1 MC9 500 A 1 HETATM 4 C C2 MC9 . . . B 2 14.915 16.959 34.784 1 8.99 ? C2 MC9 500 A 1 HETATM 5 C C3 MC9 . . . B 2 16.075 17.628 33.885 1 9.59 ? C3 MC9 500 A 1 HETATM 6 C C4 MC9 . . . B 2 15.483 18.807 32.987 1 10.11 ? C4 MC9 500 A 1 HETATM 7 C C5 MC9 . . . B 2 14.678 19.885 33.787 1 10.02 ? C5 MC9 500 A 1 HETATM 8 C C6 MC9 . . . B 2 14.863 21.255 33.657 1 8.64 ? C6 MC9 500 A 1 HETATM 9 C C7 MC9 . . . B 2 14.201 22.415 34.314 1 8.73 ? C7 MC9 500 A 1 HETATM 10 C C8 MC9 . . . B 2 13.986 23.624 33.852 1 11.49 ? C8 MC9 500 A 1 HETATM 11 C C9 MC9 . . . B 2 14.435 24.111 32.379 1 10.08 ? C9 MC9 500 A 1 HETATM 12 C C10 MC9 . . . B 2 13.601 19.195 34.773 1 8.03 ? C10 MC9 500 A 1 HETATM 13 C C11 MC9 . . . B 2 13.187 24.646 31.491 1 12.22 ? C11 MC9 500 A 1 HETATM 14 C C12 MC9 . . . B 2 12.231 25.592 32.391 1 8.89 ? C12 MC9 500 A 1 HETATM 15 C C13 MC9 . . . B 2 11.814 25.129 33.96 1 11.38 ? C13 MC9 500 A 1 HETATM 16 C C14 MC9 . . . B 2 13.25 24.729 34.667 1 9.91 ? C14 MC9 500 A 1 HETATM 17 C C15 MC9 . . . B 2 12.699 24.372 36.222 1 10.49 ? C15 MC9 500 A 1 HETATM 18 C C16 MC9 . . . B 2 11.475 25.384 36.38 1 11.76 ? C16 MC9 500 A 1 HETATM 19 C C17 MC9 . . . B 2 11.418 26.18 35.02 1 13.31 ? C17 MC9 500 A 1 HETATM 20 C C18 MC9 . . . B 2 10.787 23.783 33.642 1 10.04 ? C18 MC9 500 A 1 HETATM 21 C C19 MC9 . . . B 2 12.257 19.556 34.813 1 9.14 ? C19 MC9 500 A 1 HETATM 22 C C20 MC9 . . . B 2 9.938 26.886 34.725 1 15.6 ? C20 MC9 500 A 1 HETATM 23 C C22 MC9 . . . B 2 8.608 26.155 35.079 1 18.77 ? C22 MC9 500 A 1 HETATM 24 C C24 MC9 . . . B 2 6.108 25.611 34.694 1 21.77 ? C24 MC9 500 A 1 HETATM 25 C C21 MC9 . . . B 2 9.865 28.248 35.448 1 15.42 ? C21 MC9 500 A 1 HETATM 26 C C25 MC9 . . . B 2 5.548 24.58 33.585 1 27.3 ? C25 MC9 500 A 1 HETATM 27 C C26 MC9 . . . B 2 5.038 25.524 32.472 1 26.29 ? C26 MC9 500 A 1 HETATM 28 C C27 MC9 . . . B 2 4.294 24.349 33.231 1 28.81 ? C27 MC9 500 A 1 HETATM 29 O O3 MC9 . . . B 2 5.253 26.752 34.973 1 23.89 ? O3 MC9 500 A 1 HETATM 30 C C23 MC9 . . . B 2 7.504 26.093 34.282 1 19.18 ? C23 MC9 500 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 30 #