data_1S1R # _model_server_result.job_id 7F2RkShDGMr8cy5EgDrjYA _model_server_result.datetime_utc '2024-11-05 11:43:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1s1r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2002}' # _entry.id 1S1R # _exptl.entry_id 1S1R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-2-METHYL-2,4-PENTANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1S1R _cell.length_a 57.917 _cell.length_b 57.917 _cell.length_c 206.168 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1S1R _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MPD _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-2-METHYL-2,4-PENTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MPD sing 243 n n C1 H11 MPD sing 244 n n C1 H12 MPD sing 245 n n C1 H13 MPD sing 246 n n C2 O2 MPD sing 247 n n C2 CM MPD sing 248 n n C2 C3 MPD sing 249 n n O2 HO2 MPD sing 250 n n CM HM1 MPD sing 251 n n CM HM2 MPD sing 252 n n CM HM3 MPD sing 253 n n C3 C4 MPD sing 254 n n C3 H31 MPD sing 255 n n C3 H32 MPD sing 256 n n C4 O4 MPD sing 257 n n C4 C5 MPD sing 258 n n C4 H4 MPD sing 259 n n O4 HO4 MPD sing 260 n n C5 H51 MPD sing 261 n n C5 H52 MPD sing 262 n n C5 H53 MPD sing 263 n n # _atom_sites.entry_id 1S1R _atom_sites.fract_transf_matrix[1][1] 0.017266 _atom_sites.fract_transf_matrix[1][2] 0.009969 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019937 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00485 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 2001 1 ACT ACT . C 3 NAP A 1 1001 1 NAP NAP . D 4 MPD A 1 2002 2 MPD MPD . E 5 HOH A 1 2003 1 HOH HOH . E 5 HOH A 2 2004 2 HOH HOH . E 5 HOH A 3 2005 3 HOH HOH . E 5 HOH A 4 2006 4 HOH HOH . E 5 HOH A 5 2007 5 HOH HOH . E 5 HOH A 6 2008 6 HOH HOH . E 5 HOH A 7 2009 7 HOH HOH . E 5 HOH A 8 2010 8 HOH HOH . E 5 HOH A 9 2011 9 HOH HOH . E 5 HOH A 10 2012 10 HOH HOH . E 5 HOH A 11 2013 11 HOH HOH . E 5 HOH A 12 2014 12 HOH HOH . E 5 HOH A 13 2015 13 HOH HOH . E 5 HOH A 14 2016 14 HOH HOH . E 5 HOH A 15 2017 15 HOH HOH . E 5 HOH A 16 2018 16 HOH HOH . E 5 HOH A 17 2019 17 HOH HOH . E 5 HOH A 18 2020 18 HOH HOH . E 5 HOH A 19 2021 19 HOH HOH . E 5 HOH A 20 2022 20 HOH HOH . E 5 HOH A 21 2023 21 HOH HOH . E 5 HOH A 22 2024 22 HOH HOH . E 5 HOH A 23 2025 23 HOH HOH . E 5 HOH A 24 2026 24 HOH HOH . E 5 HOH A 25 2027 25 HOH HOH . E 5 HOH A 26 2028 26 HOH HOH . E 5 HOH A 27 2029 27 HOH HOH . E 5 HOH A 28 2030 28 HOH HOH . E 5 HOH A 29 2031 29 HOH HOH . E 5 HOH A 30 2032 30 HOH HOH . E 5 HOH A 31 2033 31 HOH HOH . E 5 HOH A 32 2034 32 HOH HOH . E 5 HOH A 33 2035 33 HOH HOH . E 5 HOH A 34 2036 34 HOH HOH . E 5 HOH A 35 2037 35 HOH HOH . E 5 HOH A 36 2038 36 HOH HOH . E 5 HOH A 37 2039 37 HOH HOH . E 5 HOH A 38 2040 38 HOH HOH . E 5 HOH A 39 2041 39 HOH HOH . E 5 HOH A 40 2042 40 HOH HOH . E 5 HOH A 41 2043 41 HOH HOH . E 5 HOH A 42 2044 42 HOH HOH . E 5 HOH A 43 2045 43 HOH HOH . E 5 HOH A 44 2046 44 HOH HOH . E 5 HOH A 45 2047 45 HOH HOH . E 5 HOH A 46 2048 46 HOH HOH . E 5 HOH A 47 2049 47 HOH HOH . E 5 HOH A 48 2050 48 HOH HOH . E 5 HOH A 49 2051 49 HOH HOH . E 5 HOH A 50 2052 50 HOH HOH . E 5 HOH A 51 2053 51 HOH HOH . E 5 HOH A 52 2054 52 HOH HOH . E 5 HOH A 53 2055 53 HOH HOH . E 5 HOH A 54 2056 54 HOH HOH . E 5 HOH A 55 2057 55 HOH HOH . E 5 HOH A 56 2058 56 HOH HOH . E 5 HOH A 57 2059 57 HOH HOH . E 5 HOH A 58 2060 58 HOH HOH . E 5 HOH A 59 2061 59 HOH HOH . E 5 HOH A 60 2062 60 HOH HOH . E 5 HOH A 61 2063 61 HOH HOH . E 5 HOH A 62 2064 62 HOH HOH . E 5 HOH A 63 2065 63 HOH HOH . E 5 HOH A 64 2066 64 HOH HOH . E 5 HOH A 65 2067 65 HOH HOH . E 5 HOH A 66 2068 66 HOH HOH . E 5 HOH A 67 2069 67 HOH HOH . E 5 HOH A 68 2070 68 HOH HOH . E 5 HOH A 69 2071 69 HOH HOH . E 5 HOH A 70 2072 70 HOH HOH . E 5 HOH A 71 2073 71 HOH HOH . E 5 HOH A 72 2074 72 HOH HOH . E 5 HOH A 73 2075 74 HOH HOH . E 5 HOH A 74 2076 75 HOH HOH . E 5 HOH A 75 2077 76 HOH HOH . E 5 HOH A 76 2078 77 HOH HOH . E 5 HOH A 77 2079 78 HOH HOH . E 5 HOH A 78 2080 79 HOH HOH . E 5 HOH A 79 2081 80 HOH HOH . E 5 HOH A 80 2082 81 HOH HOH . E 5 HOH A 81 2083 82 HOH HOH . E 5 HOH A 82 2084 83 HOH HOH . E 5 HOH A 83 2085 84 HOH HOH . E 5 HOH A 84 2086 85 HOH HOH . E 5 HOH A 85 2087 86 HOH HOH . E 5 HOH A 86 2088 87 HOH HOH . E 5 HOH A 87 2089 88 HOH HOH . E 5 HOH A 88 2090 89 HOH HOH . E 5 HOH A 89 2091 90 HOH HOH . E 5 HOH A 90 2092 91 HOH HOH . E 5 HOH A 91 2093 92 HOH HOH . E 5 HOH A 92 2094 93 HOH HOH . E 5 HOH A 93 2095 94 HOH HOH . E 5 HOH A 94 2096 95 HOH HOH . E 5 HOH A 95 2097 96 HOH HOH . E 5 HOH A 96 2098 97 HOH HOH . E 5 HOH A 97 2099 98 HOH HOH . E 5 HOH A 98 2100 99 HOH HOH . E 5 HOH A 99 2101 100 HOH HOH . E 5 HOH A 100 2102 101 HOH HOH . E 5 HOH A 101 2103 102 HOH HOH . E 5 HOH A 102 2104 103 HOH HOH . E 5 HOH A 103 2105 104 HOH HOH . E 5 HOH A 104 2106 105 HOH HOH . E 5 HOH A 105 2107 106 HOH HOH . E 5 HOH A 106 2108 107 HOH HOH . E 5 HOH A 107 2109 108 HOH HOH . E 5 HOH A 108 2110 109 HOH HOH . E 5 HOH A 109 2111 110 HOH HOH . E 5 HOH A 110 2112 111 HOH HOH . E 5 HOH A 111 2113 112 HOH HOH . E 5 HOH A 112 2114 113 HOH HOH . E 5 HOH A 113 2115 114 HOH HOH . E 5 HOH A 114 2116 115 HOH HOH . E 5 HOH A 115 2117 116 HOH HOH . E 5 HOH A 116 2118 117 HOH HOH . E 5 HOH A 117 2119 118 HOH HOH . E 5 HOH A 118 2120 119 HOH HOH . E 5 HOH A 119 2121 120 HOH HOH . E 5 HOH A 120 2122 121 HOH HOH . E 5 HOH A 121 2123 122 HOH HOH . E 5 HOH A 122 2124 123 HOH HOH . E 5 HOH A 123 2125 125 HOH HOH . E 5 HOH A 124 2126 126 HOH HOH . E 5 HOH A 125 2127 127 HOH HOH . E 5 HOH A 126 2128 128 HOH HOH . E 5 HOH A 127 2129 129 HOH HOH . E 5 HOH A 128 2130 130 HOH HOH . E 5 HOH A 129 2131 131 HOH HOH . E 5 HOH A 130 2132 132 HOH HOH . E 5 HOH A 131 2133 133 HOH HOH . E 5 HOH A 132 2134 134 HOH HOH . E 5 HOH A 133 2135 135 HOH HOH . E 5 HOH A 134 2136 136 HOH HOH . E 5 HOH A 135 2137 137 HOH HOH . E 5 HOH A 136 2138 138 HOH HOH . E 5 HOH A 137 2139 139 HOH HOH . E 5 HOH A 138 2140 140 HOH HOH . E 5 HOH A 139 2141 141 HOH HOH . E 5 HOH A 140 2142 142 HOH HOH . E 5 HOH A 141 2143 143 HOH HOH . E 5 HOH A 142 2144 144 HOH HOH . E 5 HOH A 143 2145 145 HOH HOH . E 5 HOH A 144 2146 146 HOH HOH . E 5 HOH A 145 2147 147 HOH HOH . E 5 HOH A 146 2148 148 HOH HOH . E 5 HOH A 147 2149 149 HOH HOH . E 5 HOH A 148 2150 150 HOH HOH . E 5 HOH A 149 2151 151 HOH HOH . E 5 HOH A 150 2152 152 HOH HOH . E 5 HOH A 151 2153 153 HOH HOH . E 5 HOH A 152 2154 154 HOH HOH . E 5 HOH A 153 2155 155 HOH HOH . E 5 HOH A 154 2156 156 HOH HOH . E 5 HOH A 155 2157 157 HOH HOH . E 5 HOH A 156 2158 158 HOH HOH . E 5 HOH A 157 2159 159 HOH HOH . E 5 HOH A 158 2160 160 HOH HOH . E 5 HOH A 159 2161 161 HOH HOH . E 5 HOH A 160 2162 162 HOH HOH . E 5 HOH A 161 2163 163 HOH HOH . E 5 HOH A 162 2164 164 HOH HOH . E 5 HOH A 163 2165 165 HOH HOH . E 5 HOH A 164 2166 166 HOH HOH . E 5 HOH A 165 2167 167 HOH HOH . E 5 HOH A 166 2168 168 HOH HOH . E 5 HOH A 167 2169 169 HOH HOH . E 5 HOH A 168 2170 170 HOH HOH . E 5 HOH A 169 2171 171 HOH HOH . E 5 HOH A 170 2172 172 HOH HOH . E 5 HOH A 171 2173 173 HOH HOH . E 5 HOH A 172 2174 174 HOH HOH . E 5 HOH A 173 2175 175 HOH HOH . E 5 HOH A 174 2176 176 HOH HOH . E 5 HOH A 175 2177 177 HOH HOH . E 5 HOH A 176 2178 178 HOH HOH . E 5 HOH A 177 2179 179 HOH HOH . E 5 HOH A 178 2180 180 HOH HOH . E 5 HOH A 179 2181 181 HOH HOH . E 5 HOH A 180 2182 182 HOH HOH . E 5 HOH A 181 2183 183 HOH HOH . E 5 HOH A 182 2184 184 HOH HOH . E 5 HOH A 183 2185 185 HOH HOH . E 5 HOH A 184 2186 186 HOH HOH . E 5 HOH A 185 2187 187 HOH HOH . E 5 HOH A 186 2188 188 HOH HOH . E 5 HOH A 187 2189 189 HOH HOH . E 5 HOH A 188 2190 190 HOH HOH . E 5 HOH A 189 2191 191 HOH HOH . E 5 HOH A 190 2192 192 HOH HOH . E 5 HOH A 191 2193 193 HOH HOH . E 5 HOH A 192 2194 194 HOH HOH . E 5 HOH A 193 2195 195 HOH HOH . E 5 HOH A 194 2196 196 HOH HOH . E 5 HOH A 195 2197 197 HOH HOH . E 5 HOH A 196 2198 198 HOH HOH . E 5 HOH A 197 2199 199 HOH HOH . E 5 HOH A 198 2200 200 HOH HOH . E 5 HOH A 199 2201 201 HOH HOH . E 5 HOH A 200 2202 202 HOH HOH . E 5 HOH A 201 2203 203 HOH HOH . E 5 HOH A 202 2204 204 HOH HOH . E 5 HOH A 203 2205 205 HOH HOH . E 5 HOH A 204 2206 206 HOH HOH . E 5 HOH A 205 2207 207 HOH HOH . E 5 HOH A 206 2208 208 HOH HOH . E 5 HOH A 207 2209 209 HOH HOH . E 5 HOH A 208 2210 210 HOH HOH . E 5 HOH A 209 2211 211 HOH HOH . E 5 HOH A 210 2212 212 HOH HOH . E 5 HOH A 211 2213 213 HOH HOH . E 5 HOH A 212 2214 214 HOH HOH . E 5 HOH A 213 2215 215 HOH HOH . E 5 HOH A 214 2216 216 HOH HOH . E 5 HOH A 215 2217 217 HOH HOH . E 5 HOH A 216 2218 218 HOH HOH . E 5 HOH A 217 2219 219 HOH HOH . E 5 HOH A 218 2220 220 HOH HOH . E 5 HOH A 219 2221 221 HOH HOH . E 5 HOH A 220 2222 222 HOH HOH . E 5 HOH A 221 2223 223 HOH HOH . E 5 HOH A 222 2224 224 HOH HOH . E 5 HOH A 223 2225 225 HOH HOH . E 5 HOH A 224 2226 226 HOH HOH . E 5 HOH A 225 2227 227 HOH HOH . E 5 HOH A 226 2228 228 HOH HOH . E 5 HOH A 227 2229 229 HOH HOH . E 5 HOH A 228 2230 230 HOH HOH . E 5 HOH A 229 2231 231 HOH HOH . E 5 HOH A 230 2232 232 HOH HOH . E 5 HOH A 231 2233 233 HOH HOH . E 5 HOH A 232 2234 234 HOH HOH . E 5 HOH A 233 2235 235 HOH HOH . E 5 HOH A 234 2236 236 HOH HOH . E 5 HOH A 235 2237 237 HOH HOH . E 5 HOH A 236 2238 238 HOH HOH . E 5 HOH A 237 2239 239 HOH HOH . E 5 HOH A 238 2240 240 HOH HOH . E 5 HOH A 239 2241 241 HOH HOH . E 5 HOH A 240 2242 242 HOH HOH . E 5 HOH A 241 2243 243 HOH HOH . E 5 HOH A 242 2244 244 HOH HOH . E 5 HOH A 243 2245 245 HOH HOH . E 5 HOH A 244 2246 246 HOH HOH . E 5 HOH A 245 2247 247 HOH HOH . E 5 HOH A 246 2248 248 HOH HOH . E 5 HOH A 247 2249 249 HOH HOH . E 5 HOH A 248 2250 250 HOH HOH . E 5 HOH A 249 2251 251 HOH HOH . E 5 HOH A 250 2252 252 HOH HOH . E 5 HOH A 251 2253 253 HOH HOH . E 5 HOH A 252 2254 254 HOH HOH . E 5 HOH A 253 2255 255 HOH HOH . E 5 HOH A 254 2256 256 HOH HOH . E 5 HOH A 255 2257 257 HOH HOH . E 5 HOH A 256 2258 258 HOH HOH . E 5 HOH A 257 2259 259 HOH HOH . E 5 HOH A 258 2260 260 HOH HOH . E 5 HOH A 259 2261 261 HOH HOH . E 5 HOH A 260 2262 262 HOH HOH . E 5 HOH A 261 2263 263 HOH HOH . E 5 HOH A 262 2264 264 HOH HOH . E 5 HOH A 263 2265 265 HOH HOH . E 5 HOH A 264 2266 266 HOH HOH . E 5 HOH A 265 2267 267 HOH HOH . E 5 HOH A 266 2268 268 HOH HOH . E 5 HOH A 267 2269 269 HOH HOH . E 5 HOH A 268 2270 270 HOH HOH . E 5 HOH A 269 2271 271 HOH HOH . E 5 HOH A 270 2272 272 HOH HOH . E 5 HOH A 271 2273 273 HOH HOH . E 5 HOH A 272 2274 274 HOH HOH . E 5 HOH A 273 2275 275 HOH HOH . E 5 HOH A 274 2276 276 HOH HOH . E 5 HOH A 275 2277 277 HOH HOH . E 5 HOH A 276 2278 278 HOH HOH . E 5 HOH A 277 2279 279 HOH HOH . E 5 HOH A 278 2280 280 HOH HOH . E 5 HOH A 279 2281 281 HOH HOH . E 5 HOH A 280 2282 282 HOH HOH . E 5 HOH A 281 2283 283 HOH HOH . E 5 HOH A 282 2284 284 HOH HOH . E 5 HOH A 283 2285 285 HOH HOH . E 5 HOH A 284 2286 286 HOH HOH . E 5 HOH A 285 2287 287 HOH HOH . E 5 HOH A 286 2288 288 HOH HOH . E 5 HOH A 287 2289 289 HOH HOH . E 5 HOH A 288 2290 290 HOH HOH . E 5 HOH A 289 2291 291 HOH HOH . E 5 HOH A 290 2292 292 HOH HOH . E 5 HOH A 291 2293 293 HOH HOH . E 5 HOH A 292 2294 294 HOH HOH . E 5 HOH A 293 2295 295 HOH HOH . E 5 HOH A 294 2296 296 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MPD . . . D 4 22.013 -14.423 53.114 1 34.42 ? C1 MPD 2002 A 1 HETATM 2 C C2 MPD . . . D 4 23.461 -14.321 53.617 1 34.82 ? C2 MPD 2002 A 1 HETATM 3 O O2 MPD . . . D 4 23.576 -13.183 54.515 1 34.54 ? O2 MPD 2002 A 1 HETATM 4 C CM MPD . . . D 4 23.869 -15.583 54.393 1 34.55 ? CM MPD 2002 A 1 HETATM 5 C C3 MPD . . . D 4 24.429 -14.096 52.446 1 35.45 ? C3 MPD 2002 A 1 HETATM 6 C C4 MPD . . . D 4 24.386 -12.697 51.818 1 35.23 ? C4 MPD 2002 A 1 HETATM 7 O O4 MPD . . . D 4 24.772 -11.694 52.725 1 34.42 ? O4 MPD 2002 A 1 HETATM 8 C C5 MPD . . . D 4 25.332 -12.629 50.624 1 36.06 ? C5 MPD 2002 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 8 #