data_1S36 # _model_server_result.job_id x99e6BqBFhIpgnKiJr_COQ _model_server_result.datetime_utc '2025-03-06 05:43:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1s36 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 1S36 # _exptl.entry_id 1S36 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1S36 _cell.length_a 53.445 _cell.length_b 53.445 _cell.length_c 144.032 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1S36 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 30 A ASP 30 1_555 B NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc2 A OD1 ASN 32 A ASN 32 1_555 B NA NA . A NA 401 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc3 A OD1 ASN 32 A ASN 32 1_555 B NA NA . A NA 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc4 A OD1 ASN 34 A ASN 34 1_555 B NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc5 A O LYS 36 A LYS 36 1_555 B NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc6 B NA NA . A NA 401 1_555 C CL CL . A CL 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1S36 _atom_sites.fract_transf_matrix[1][1] 0.018711 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018711 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006943 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 401 401 NA NA . C 3 CL A 1 402 402 CL CL . D 4 CEI A 1 201 201 CEI CZM . E 5 GOL A 1 301 301 GOL GOL . F 6 HOH A 1 403 1 HOH HOH . F 6 HOH A 2 404 2 HOH HOH . F 6 HOH A 3 405 3 HOH HOH . F 6 HOH A 4 406 5 HOH HOH . F 6 HOH A 5 407 6 HOH HOH . F 6 HOH A 6 408 7 HOH HOH . F 6 HOH A 7 409 8 HOH HOH . F 6 HOH A 8 410 9 HOH HOH . F 6 HOH A 9 411 10 HOH HOH . F 6 HOH A 10 412 11 HOH HOH . F 6 HOH A 11 413 12 HOH HOH . F 6 HOH A 12 414 13 HOH HOH . F 6 HOH A 13 415 14 HOH HOH . F 6 HOH A 14 416 15 HOH HOH . F 6 HOH A 15 417 16 HOH HOH . F 6 HOH A 16 418 18 HOH HOH . F 6 HOH A 17 419 19 HOH HOH . F 6 HOH A 18 420 20 HOH HOH . F 6 HOH A 19 421 21 HOH HOH . F 6 HOH A 20 422 23 HOH HOH . F 6 HOH A 21 423 24 HOH HOH . F 6 HOH A 22 424 25 HOH HOH . F 6 HOH A 23 425 26 HOH HOH . F 6 HOH A 24 426 27 HOH HOH . F 6 HOH A 25 427 28 HOH HOH . F 6 HOH A 26 428 29 HOH HOH . F 6 HOH A 27 429 30 HOH HOH . F 6 HOH A 28 430 31 HOH HOH . F 6 HOH A 29 431 32 HOH HOH . F 6 HOH A 30 432 33 HOH HOH . F 6 HOH A 31 433 34 HOH HOH . F 6 HOH A 32 434 35 HOH HOH . F 6 HOH A 33 435 36 HOH HOH . F 6 HOH A 34 436 37 HOH HOH . F 6 HOH A 35 437 38 HOH HOH . F 6 HOH A 36 438 39 HOH HOH . F 6 HOH A 37 439 40 HOH HOH . F 6 HOH A 38 440 41 HOH HOH . F 6 HOH A 39 441 42 HOH HOH . F 6 HOH A 40 442 43 HOH HOH . F 6 HOH A 41 443 45 HOH HOH . F 6 HOH A 42 444 46 HOH HOH . F 6 HOH A 43 445 47 HOH HOH . F 6 HOH A 44 446 48 HOH HOH . F 6 HOH A 45 447 49 HOH HOH . F 6 HOH A 46 448 50 HOH HOH . F 6 HOH A 47 449 51 HOH HOH . F 6 HOH A 48 450 52 HOH HOH . F 6 HOH A 49 451 53 HOH HOH . F 6 HOH A 50 452 54 HOH HOH . F 6 HOH A 51 453 55 HOH HOH . F 6 HOH A 52 454 56 HOH HOH . F 6 HOH A 53 455 57 HOH HOH . F 6 HOH A 54 456 58 HOH HOH . F 6 HOH A 55 457 59 HOH HOH . F 6 HOH A 56 458 60 HOH HOH . F 6 HOH A 57 459 61 HOH HOH . F 6 HOH A 58 460 62 HOH HOH . F 6 HOH A 59 461 63 HOH HOH . F 6 HOH A 60 462 65 HOH HOH . F 6 HOH A 61 463 66 HOH HOH . F 6 HOH A 62 464 67 HOH HOH . F 6 HOH A 63 465 68 HOH HOH . F 6 HOH A 64 466 69 HOH HOH . F 6 HOH A 65 467 70 HOH HOH . F 6 HOH A 66 468 71 HOH HOH . F 6 HOH A 67 469 72 HOH HOH . F 6 HOH A 68 470 73 HOH HOH . F 6 HOH A 69 471 74 HOH HOH . F 6 HOH A 70 472 75 HOH HOH . F 6 HOH A 71 473 76 HOH HOH . F 6 HOH A 72 474 77 HOH HOH . F 6 HOH A 73 475 78 HOH HOH . F 6 HOH A 74 476 79 HOH HOH . F 6 HOH A 75 477 80 HOH HOH . F 6 HOH A 76 478 81 HOH HOH . F 6 HOH A 77 479 82 HOH HOH . F 6 HOH A 78 480 83 HOH HOH . F 6 HOH A 79 481 84 HOH HOH . F 6 HOH A 80 482 85 HOH HOH . F 6 HOH A 81 483 86 HOH HOH . F 6 HOH A 82 484 87 HOH HOH . F 6 HOH A 83 485 88 HOH HOH . F 6 HOH A 84 486 89 HOH HOH . F 6 HOH A 85 487 90 HOH HOH . F 6 HOH A 86 488 91 HOH HOH . F 6 HOH A 87 489 92 HOH HOH . F 6 HOH A 88 490 93 HOH HOH . F 6 HOH A 89 491 94 HOH HOH . F 6 HOH A 90 492 95 HOH HOH . F 6 HOH A 91 493 96 HOH HOH . F 6 HOH A 92 494 98 HOH HOH . F 6 HOH A 93 495 99 HOH HOH . F 6 HOH A 94 496 101 HOH HOH . F 6 HOH A 95 497 102 HOH HOH . F 6 HOH A 96 498 103 HOH HOH . F 6 HOH A 97 499 104 HOH HOH . F 6 HOH A 98 500 111 HOH HOH . F 6 HOH A 99 501 112 HOH HOH . F 6 HOH A 100 502 113 HOH HOH . F 6 HOH A 101 503 114 HOH HOH . F 6 HOH A 102 504 115 HOH HOH . F 6 HOH A 103 505 116 HOH HOH . F 6 HOH A 104 506 117 HOH HOH . F 6 HOH A 105 507 118 HOH HOH . F 6 HOH A 106 508 119 HOH HOH . F 6 HOH A 107 509 120 HOH HOH . F 6 HOH A 108 510 122 HOH HOH . F 6 HOH A 109 511 123 HOH HOH . F 6 HOH A 110 512 124 HOH HOH . F 6 HOH A 111 513 125 HOH HOH . F 6 HOH A 112 514 126 HOH HOH . F 6 HOH A 113 515 127 HOH HOH . F 6 HOH A 114 516 128 HOH HOH . F 6 HOH A 115 517 129 HOH HOH . F 6 HOH A 116 518 131 HOH HOH . F 6 HOH A 117 519 132 HOH HOH . F 6 HOH A 118 520 133 HOH HOH . F 6 HOH A 119 521 134 HOH HOH . F 6 HOH A 120 522 136 HOH HOH . F 6 HOH A 121 523 137 HOH HOH . F 6 HOH A 122 524 138 HOH HOH . F 6 HOH A 123 525 139 HOH HOH . F 6 HOH A 124 526 141 HOH HOH . F 6 HOH A 125 527 142 HOH HOH . F 6 HOH A 126 528 144 HOH HOH . F 6 HOH A 127 529 145 HOH HOH . F 6 HOH A 128 530 147 HOH HOH . F 6 HOH A 129 531 148 HOH HOH . F 6 HOH A 130 532 149 HOH HOH . F 6 HOH A 131 533 150 HOH HOH . F 6 HOH A 132 534 153 HOH HOH . F 6 HOH A 133 535 154 HOH HOH . F 6 HOH A 134 536 155 HOH HOH . F 6 HOH A 135 537 156 HOH HOH . F 6 HOH A 136 538 157 HOH HOH . F 6 HOH A 137 539 158 HOH HOH . F 6 HOH A 138 540 161 HOH HOH . F 6 HOH A 139 541 163 HOH HOH . F 6 HOH A 140 542 164 HOH HOH . F 6 HOH A 141 543 166 HOH HOH . F 6 HOH A 142 544 167 HOH HOH . F 6 HOH A 143 545 168 HOH HOH . F 6 HOH A 144 546 171 HOH HOH . F 6 HOH A 145 547 172 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 47.698 _atom_site.Cartn_y 10.876 _atom_site.Cartn_z -63.249 _atom_site.occupancy 0.52 _atom_site.B_iso_or_equiv 5.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #