data_1S3U # _model_server_result.job_id z2XzGI8eR4Czm5jbS68HvQ _model_server_result.datetime_utc '2024-11-27 02:55:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1s3u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":187}' # _entry.id 1S3U # _exptl.entry_id 1S3U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 375.465 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R,6S)-6-{[methyl(3,4,5-trimethoxyphenyl)amino]methyl}-1,2,5,6,7,8-hexahydroquinazoline-2,4-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1S3U _cell.length_a 85.173 _cell.length_b 85.173 _cell.length_c 77.856 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1S3U _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H29 N5 O3' _chem_comp.formula_weight 375.465 _chem_comp.id TQD _chem_comp.mon_nstd_flag . _chem_comp.name (2R,6S)-6-{[methyl(3,4,5-trimethoxyphenyl)amino]methyl}-1,2,5,6,7,8-hexahydroquinazoline-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2D N1' TQD sing 310 n n C2D N2' TQD sing 311 n n C2D N3' TQD sing 312 n n C2D H2' TQD sing 313 n n C4D C4A TQD sing 314 n n C4D N3' TQD doub 315 n n C4D N4' TQD sing 316 n n C4A C5D TQD sing 317 n n C4A C8A TQD doub 318 n n C5D C6D TQD sing 319 n n C5D "H5'1" TQD sing 320 n n C5D "H5'2" TQD sing 321 n n C6D C7' TQD sing 322 n n C6D C8' TQD sing 323 n n C6D H6' TQD sing 324 n n C7' C8 TQD sing 325 n n C7' "H7'1" TQD sing 326 n n C7' "H7'2" TQD sing 327 n n C8 C8A TQD sing 328 n n C8 H81 TQD sing 329 n n C8 H82 TQD sing 330 n n C8A N1' TQD sing 331 n n C8' N9' TQD sing 332 n n C8' "H8'1" TQD sing 333 n n C8' "H8'2" TQD sing 334 n n C1' C2' TQD doub 335 n y C1' C6' TQD sing 336 n y C1' N9' TQD sing 337 n n C2' C3' TQD sing 338 n y C2' "H2'1" TQD sing 339 n n C3' C4' TQD doub 340 n y C3' O3' TQD sing 341 n n C3B O3' TQD sing 342 n n C3B H3B1 TQD sing 343 n n C3B H3B2 TQD sing 344 n n C3B H3B3 TQD sing 345 n n C4' C5' TQD sing 346 n y C4' O4' TQD sing 347 n n C4B O4' TQD sing 348 n n C4B H4B1 TQD sing 349 n n C4B H4B2 TQD sing 350 n n C4B H4B3 TQD sing 351 n n C5' C6' TQD doub 352 n y C5' O5' TQD sing 353 n n C5B O5' TQD sing 354 n n C5B H5B1 TQD sing 355 n n C5B H5B2 TQD sing 356 n n C5B H5B3 TQD sing 357 n n C6' "H6'1" TQD sing 358 n n N1' H1D TQD sing 359 n n N2' H2A1 TQD sing 360 n n N2' H2A2 TQD sing 361 n n N4' "H4'1" TQD sing 362 n n N4' "H4'2" TQD sing 363 n n N9' C9' TQD sing 364 n n C9' "H9'1" TQD sing 365 n n C9' "H9'2" TQD sing 366 n n C9' "H9'3" TQD sing 367 n n # _atom_sites.entry_id 1S3U _atom_sites.fract_transf_matrix[1][1] 0.011741 _atom_sites.fract_transf_matrix[1][2] 0.006779 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013557 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012844 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 188 188 SO4 SUL . C 2 SO4 A 1 189 189 SO4 SUL . D 3 TQD A 1 187 187 TQD TMQ . E 4 HOH A 1 190 190 HOH HOH . E 4 HOH A 2 191 191 HOH HOH . E 4 HOH A 3 192 192 HOH HOH . E 4 HOH A 4 193 193 HOH HOH . E 4 HOH A 5 194 194 HOH HOH . E 4 HOH A 6 195 195 HOH HOH . E 4 HOH A 7 196 196 HOH HOH . E 4 HOH A 8 197 197 HOH HOH . E 4 HOH A 9 198 198 HOH HOH . E 4 HOH A 10 199 199 HOH HOH . E 4 HOH A 11 200 200 HOH HOH . E 4 HOH A 12 201 201 HOH HOH . E 4 HOH A 13 202 202 HOH HOH . E 4 HOH A 14 203 203 HOH HOH . E 4 HOH A 15 204 204 HOH HOH . E 4 HOH A 16 205 205 HOH HOH . E 4 HOH A 17 206 206 HOH HOH . E 4 HOH A 18 207 207 HOH HOH . E 4 HOH A 19 208 208 HOH HOH . E 4 HOH A 20 209 209 HOH HOH . E 4 HOH A 21 210 210 HOH HOH . E 4 HOH A 22 211 211 HOH HOH . E 4 HOH A 23 212 212 HOH HOH . E 4 HOH A 24 213 213 HOH HOH . E 4 HOH A 25 214 214 HOH HOH . E 4 HOH A 26 215 215 HOH HOH . E 4 HOH A 27 216 216 HOH HOH . E 4 HOH A 28 217 217 HOH HOH . E 4 HOH A 29 218 218 HOH HOH . E 4 HOH A 30 219 219 HOH HOH . E 4 HOH A 31 220 220 HOH HOH . E 4 HOH A 32 221 221 HOH HOH . E 4 HOH A 33 222 222 HOH HOH . E 4 HOH A 34 223 223 HOH HOH . E 4 HOH A 35 224 224 HOH HOH . E 4 HOH A 36 225 225 HOH HOH . E 4 HOH A 37 226 226 HOH HOH . E 4 HOH A 38 227 227 HOH HOH . E 4 HOH A 39 228 228 HOH HOH . E 4 HOH A 40 229 229 HOH HOH . E 4 HOH A 41 230 230 HOH HOH . E 4 HOH A 42 231 231 HOH HOH . E 4 HOH A 43 232 232 HOH HOH . E 4 HOH A 44 233 233 HOH HOH . E 4 HOH A 45 234 234 HOH HOH . E 4 HOH A 46 235 235 HOH HOH . E 4 HOH A 47 236 236 HOH HOH . E 4 HOH A 48 237 237 HOH HOH . E 4 HOH A 49 238 238 HOH HOH . E 4 HOH A 50 239 239 HOH HOH . E 4 HOH A 51 240 240 HOH HOH . E 4 HOH A 52 241 241 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2D TQD . . . D 3 27.47 12.689 -4.564 1 10.66 ? C2D TQD 187 A 1 HETATM 2 C C4D TQD . . . D 3 27.131 12.585 -2.253 1 10.92 ? C4D TQD 187 A 1 HETATM 3 C C4A TQD . . . D 3 28.256 13.467 -2.021 1 11.34 ? C4A TQD 187 A 1 HETATM 4 C C5D TQD . . . D 3 28.819 13.707 -0.738 1 12.59 ? C5D TQD 187 A 1 HETATM 5 C C6D TQD . . . D 3 29.97 14.491 -0.624 1 14.04 ? C6D TQD 187 A 1 HETATM 6 C C7' TQD . . . D 3 30.72 14.838 -1.769 1 12.25 ? C7' TQD 187 A 1 HETATM 7 C C8 TQD . . . D 3 30.326 14.3 -3.028 1 9.53 ? C8 TQD 187 A 1 HETATM 8 C C8A TQD . . . D 3 29.13 13.597 -3.131 1 11.22 ? C8A TQD 187 A 1 HETATM 9 C C8' TQD . . . D 3 30.502 14.727 0.824 1 15.85 ? C8' TQD 187 A 1 HETATM 10 C C1' TQD . . . D 3 32.704 15.802 0.694 1 16.75 ? C1' TQD 187 A 1 HETATM 11 C C2' TQD . . . D 3 34.055 15.545 0.52 1 17.17 ? C2' TQD 187 A 1 HETATM 12 C C3' TQD . . . D 3 34.871 16.588 0.145 1 17.88 ? C3' TQD 187 A 1 HETATM 13 C C3B TQD . . . D 3 36.789 15.206 0.308 1 18.51 ? C3B TQD 187 A 1 HETATM 14 C C4' TQD . . . D 3 34.379 17.864 -0.034 1 18.13 ? C4' TQD 187 A 1 HETATM 15 C C4B TQD . . . D 3 36.196 18.401 -1.369 1 19.65 ? C4B TQD 187 A 1 HETATM 16 C C5' TQD . . . D 3 33.006 18.109 0.145 1 17.51 ? C5' TQD 187 A 1 HETATM 17 C C5B TQD . . . D 3 31.35 19.72 0.055 1 17.77 ? C5B TQD 187 A 1 HETATM 18 C C6' TQD . . . D 3 32.12 17.056 0.466 1 15.98 ? C6' TQD 187 A 1 HETATM 19 N N1' TQD . . . D 3 28.819 12.999 -4.346 1 11.28 ? N1' TQD 187 A 1 HETATM 20 N N2' TQD . . . D 3 27.143 12.087 -5.687 1 10.38 ? N2' TQD 187 A 1 HETATM 21 N N3' TQD . . . D 3 26.709 12.424 -3.474 1 10.78 ? N3' TQD 187 A 1 HETATM 22 N N4' TQD . . . D 3 26.254 12.199 -1.313 1 10.69 ? N4' TQD 187 A 1 HETATM 23 N N9' TQD . . . D 3 31.951 14.687 1.006 1 16.59 ? N9' TQD 187 A 1 HETATM 24 O O3' TQD . . . D 3 36.213 16.461 -0.021 1 18.31 ? O3' TQD 187 A 1 HETATM 25 O O4' TQD . . . D 3 35.267 18.9 -0.403 1 19.49 ? O4' TQD 187 A 1 HETATM 26 O O5' TQD . . . D 3 32.772 19.498 -0.116 1 17.6 ? O5' TQD 187 A 1 HETATM 27 C C9' TQD . . . D 3 32.66 13.475 1.355 1 16.73 ? C9' TQD 187 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 27 #