data_1S56 # _model_server_result.job_id ggFtBzzxch-0oQ6dCxlMAw _model_server_result.datetime_utc '2024-11-22 18:24:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1s56 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":207}' # _entry.id 1S56 # _exptl.entry_id 1S56 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 131.293 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description XENON _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1S56 _cell.length_a 44.321 _cell.length_b 61.959 _cell.length_c 90.747 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1S56 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,Q 1 1 B,J,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N ? 5 M N N ? 5 N N N ? 5 O N N ? 5 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLN 79 A GLN 79 1_555 D K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? metalc ? metalc2 A O VAL 80 A VAL 80 1_555 D K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.185 ? metalc ? metalc3 A NE2 HIS 81 A HIS 81 1_555 E FE HEC . A HEC 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc4 A O GLN 82 A GLN 82 1_555 D K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.845 ? metalc ? metalc5 E FE HEC . A HEC 144 1_555 C C CYN . A CYN 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.108 ? metalc ? metalc6 E FE HEC . A HEC 144 1_555 C N CYN . A CYN 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.985 ? metalc ? metalc7 D K K . A K 401 1_555 B O GLY 83 B GLY 83 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.853 ? metalc ? metalc8 B NE2 HIS 81 B HIS 81 1_555 L FE HEM . B HEM 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc9 L FE HEM . B HEM 144 1_555 J N CYN . B CYN 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? metalc ? metalc10 L FE HEM . B HEM 144 1_555 J C CYN . B CYN 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? # _chem_comp.formula Xe _chem_comp.formula_weight 131.293 _chem_comp.id XE _chem_comp.mon_nstd_flag . _chem_comp.name XENON _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1S56 _atom_sites.fract_transf_matrix[1][1] 0.022563 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01614 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01102 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CYN A 1 145 145 CYN CYN . D 3 K A 1 401 1 K K1 . E 4 HEC A 1 144 144 HEC HEM . F 5 XE A 1 202 2 XE XE . G 5 XE A 1 203 3 XE XE . H 5 XE A 1 207 7 XE XE . I 5 XE A 1 208 8 XE XE . J 2 CYN B 1 245 145 CYN CYN . K 6 PO4 B 1 301 1 PO4 PO4 . L 7 HEM B 1 144 144 HEM HEM . M 5 XE B 1 201 1 XE XE . N 5 XE B 1 204 4 XE XE . O 5 XE B 1 205 5 XE XE . P 5 XE B 1 206 6 XE XE . Q 8 HOH A 1 402 2 HOH HOH . Q 8 HOH A 2 403 3 HOH HOH . Q 8 HOH A 3 404 4 HOH HOH . Q 8 HOH A 4 405 6 HOH HOH . Q 8 HOH A 5 406 7 HOH HOH . Q 8 HOH A 6 407 8 HOH HOH . Q 8 HOH A 7 408 10 HOH HOH . Q 8 HOH A 8 409 12 HOH HOH . Q 8 HOH A 9 410 14 HOH HOH . Q 8 HOH A 10 411 15 HOH HOH . Q 8 HOH A 11 412 16 HOH HOH . Q 8 HOH A 12 413 17 HOH HOH . Q 8 HOH A 13 414 18 HOH HOH . Q 8 HOH A 14 415 20 HOH HOH . Q 8 HOH A 15 416 21 HOH HOH . Q 8 HOH A 16 417 23 HOH HOH . Q 8 HOH A 17 418 28 HOH HOH . Q 8 HOH A 18 419 30 HOH HOH . Q 8 HOH A 19 420 33 HOH HOH . Q 8 HOH A 20 421 34 HOH HOH . Q 8 HOH A 21 422 35 HOH HOH . Q 8 HOH A 22 423 36 HOH HOH . Q 8 HOH A 23 424 38 HOH HOH . Q 8 HOH A 24 425 42 HOH HOH . Q 8 HOH A 25 426 43 HOH HOH . Q 8 HOH A 26 427 46 HOH HOH . Q 8 HOH A 27 428 49 HOH HOH . Q 8 HOH A 28 429 50 HOH HOH . Q 8 HOH A 29 430 51 HOH HOH . Q 8 HOH A 30 431 53 HOH HOH . Q 8 HOH A 31 432 54 HOH HOH . Q 8 HOH A 32 433 55 HOH HOH . Q 8 HOH A 33 434 58 HOH HOH . Q 8 HOH A 34 435 59 HOH HOH . Q 8 HOH A 35 436 60 HOH HOH . Q 8 HOH A 36 437 61 HOH HOH . Q 8 HOH A 37 438 63 HOH HOH . Q 8 HOH A 38 439 64 HOH HOH . Q 8 HOH A 39 440 65 HOH HOH . Q 8 HOH A 40 441 67 HOH HOH . Q 8 HOH A 41 442 69 HOH HOH . Q 8 HOH A 42 443 70 HOH HOH . Q 8 HOH A 43 444 71 HOH HOH . Q 8 HOH A 44 445 72 HOH HOH . Q 8 HOH A 45 446 73 HOH HOH . Q 8 HOH A 46 447 74 HOH HOH . Q 8 HOH A 47 448 76 HOH HOH . Q 8 HOH A 48 449 78 HOH HOH . Q 8 HOH A 49 450 80 HOH HOH . Q 8 HOH A 50 451 81 HOH HOH . Q 8 HOH A 51 452 82 HOH HOH . Q 8 HOH A 52 453 87 HOH HOH . Q 8 HOH A 53 454 90 HOH HOH . Q 8 HOH A 54 455 91 HOH HOH . Q 8 HOH A 55 456 92 HOH HOH . Q 8 HOH A 56 457 94 HOH HOH . Q 8 HOH A 57 458 97 HOH HOH . Q 8 HOH A 58 459 98 HOH HOH . Q 8 HOH A 59 460 99 HOH HOH . Q 8 HOH A 60 461 101 HOH HOH . Q 8 HOH A 61 462 102 HOH HOH . Q 8 HOH A 62 463 106 HOH HOH . R 8 HOH B 1 302 1 HOH HOH . R 8 HOH B 2 303 5 HOH HOH . R 8 HOH B 3 304 9 HOH HOH . R 8 HOH B 4 305 11 HOH HOH . R 8 HOH B 5 306 13 HOH HOH . R 8 HOH B 6 307 19 HOH HOH . R 8 HOH B 7 308 22 HOH HOH . R 8 HOH B 8 309 24 HOH HOH . R 8 HOH B 9 310 25 HOH HOH . R 8 HOH B 10 311 26 HOH HOH . R 8 HOH B 11 312 27 HOH HOH . R 8 HOH B 12 313 29 HOH HOH . R 8 HOH B 13 314 31 HOH HOH . R 8 HOH B 14 315 32 HOH HOH . R 8 HOH B 15 316 37 HOH HOH . R 8 HOH B 16 317 39 HOH HOH . R 8 HOH B 17 318 40 HOH HOH . R 8 HOH B 18 319 41 HOH HOH . R 8 HOH B 19 320 44 HOH HOH . R 8 HOH B 20 321 45 HOH HOH . R 8 HOH B 21 322 47 HOH HOH . R 8 HOH B 22 323 48 HOH HOH . R 8 HOH B 23 324 52 HOH HOH . R 8 HOH B 24 325 56 HOH HOH . R 8 HOH B 25 326 57 HOH HOH . R 8 HOH B 26 327 62 HOH HOH . R 8 HOH B 27 328 66 HOH HOH . R 8 HOH B 28 329 68 HOH HOH . R 8 HOH B 29 330 75 HOH HOH . R 8 HOH B 30 331 77 HOH HOH . R 8 HOH B 31 332 79 HOH HOH . R 8 HOH B 32 333 83 HOH HOH . R 8 HOH B 33 334 84 HOH HOH . R 8 HOH B 34 335 85 HOH HOH . R 8 HOH B 35 336 86 HOH HOH . R 8 HOH B 36 337 88 HOH HOH . R 8 HOH B 37 338 89 HOH HOH . R 8 HOH B 38 339 93 HOH HOH . R 8 HOH B 39 340 95 HOH HOH . R 8 HOH B 40 341 96 HOH HOH . R 8 HOH B 41 342 100 HOH HOH . R 8 HOH B 42 343 103 HOH HOH . R 8 HOH B 43 344 104 HOH HOH . R 8 HOH B 44 345 105 HOH HOH . R 8 HOH B 45 346 107 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol XE _atom_site.label_atom_id XE _atom_site.label_comp_id XE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 5 _atom_site.Cartn_x 9.331 _atom_site.Cartn_y 15.854 _atom_site.Cartn_z 12.089 _atom_site.occupancy 0.31 _atom_site.B_iso_or_equiv 60.9 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id XE _atom_site.auth_comp_id XE _atom_site.auth_seq_id 207 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #