data_1S60 # _model_server_result.job_id FTAoMjpL6gHfi5h57yZDCQ _model_server_result.datetime_utc '2024-11-20 18:38:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1s60 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 1S60 # _exptl.entry_id 1S60 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1S60 _cell.length_a 84.6 _cell.length_b 84.6 _cell.length_c 66.75 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1S60 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_676 x-y+1,-y+2,-z+4/3 1 0 0 0 -1 0 0 0 -1 0 146.531498 89 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 1S60 _atom_sites.fract_transf_matrix[1][1] 0.01182 _atom_sites.fract_transf_matrix[1][2] 0.006824 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013649 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014981 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 800 800 SO4 SO4 . C 3 COA A 1 600 600 COA COA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . C 3 7.211 54.749 37.097 1 58.94 ? N1A COA 600 A 1 HETATM 2 C C2A COA . . . C 3 7.212 55.443 35.91 1 58.94 ? C2A COA 600 A 1 HETATM 3 N N3A COA . . . C 3 6.25 55.484 34.971 1 58.94 ? N3A COA 600 A 1 HETATM 4 C C4A COA . . . C 3 5.115 54.72 35.278 1 58.94 ? C4A COA 600 A 1 HETATM 5 C C5A COA . . . C 3 5.032 53.975 36.485 1 58.94 ? C5A COA 600 A 1 HETATM 6 C C6A COA . . . C 3 6.115 53.988 37.403 1 58.94 ? C6A COA 600 A 1 HETATM 7 N N6A COA . . . C 3 5.962 53.234 38.546 1 58.94 ? N6A COA 600 A 1 HETATM 8 N N7A COA . . . C 3 3.847 53.282 36.587 1 58.94 ? N7A COA 600 A 1 HETATM 9 C C8A COA . . . C 3 3.192 53.566 35.502 1 58.94 ? C8A COA 600 A 1 HETATM 10 N N9A COA . . . C 3 3.911 54.389 34.708 1 58.94 ? N9A COA 600 A 1 HETATM 11 C C1B COA . . . C 3 3.447 54.857 33.42 1 58.94 ? C1B COA 600 A 1 HETATM 12 C C2B COA . . . C 3 3.204 53.679 32.467 1 58.94 ? C2B COA 600 A 1 HETATM 13 O O2B COA . . . C 3 4.426 53.205 31.859 1 58.94 ? O2B COA 600 A 1 HETATM 14 C C3B COA . . . C 3 2.379 54.379 31.466 1 58.94 ? C3B COA 600 A 1 HETATM 15 O O3B COA . . . C 3 1.866 53.537 30.495 1 58.94 ? O3B COA 600 A 1 HETATM 16 P P3B COA . . . C 3 1.886 54.057 28.922 1 58.94 ? P3B COA 600 A 1 HETATM 17 O O7A COA . . . C 3 2.532 55.438 28.913 1 58.94 ? O7A COA 600 A 1 HETATM 18 O O8A COA . . . C 3 0.44 54.05 28.388 1 58.94 ? O8A COA 600 A 1 HETATM 19 O O9A COA . . . C 3 2.791 53.036 28.275 1 58.94 ? O9A COA 600 A 1 HETATM 20 C C4B COA . . . C 3 1.375 55.097 32.379 1 58.94 ? C4B COA 600 A 1 HETATM 21 O O4B COA . . . C 3 2.173 55.477 33.514 1 58.94 ? O4B COA 600 A 1 HETATM 22 C C5B COA . . . C 3 0.066 54.399 32.85 1 58.94 ? C5B COA 600 A 1 HETATM 23 O O5B COA . . . C 3 0.362 53.476 33.936 1 58.94 ? O5B COA 600 A 1 HETATM 24 P P1A COA . . . C 3 -0.668 52.326 34.554 1 58.94 ? P1A COA 600 A 1 HETATM 25 O O1A COA . . . C 3 -1.998 52.295 33.877 1 58.94 ? O1A COA 600 A 1 HETATM 26 O O2A COA . . . C 3 0.105 51.054 34.49 1 58.94 ? O2A COA 600 A 1 HETATM 27 O O3A COA . . . C 3 -0.84 52.754 36.071 1 58.94 ? O3A COA 600 A 1 HETATM 28 P P2A COA . . . C 3 -0.482 51.939 37.378 1 58.94 ? P2A COA 600 A 1 HETATM 29 O O4A COA . . . C 3 -1.146 50.608 37.392 1 58.94 ? O4A COA 600 A 1 HETATM 30 O O5A COA . . . C 3 0.975 51.727 37.549 1 58.94 ? O5A COA 600 A 1 HETATM 31 O O6A COA . . . C 3 -0.848 52.829 38.72 1 58.94 ? O6A COA 600 A 1 HETATM 32 C CBP COA . . . C 3 -0.584 54.773 40.329 1 58.94 ? CBP COA 600 A 1 HETATM 33 C CCP COA . . . C 3 -0.295 54.157 38.916 1 58.94 ? CCP COA 600 A 1 HETATM 34 C CDP COA . . . C 3 -0.334 56.279 40.222 1 58.94 ? CDP COA 600 A 1 HETATM 35 C CEP COA . . . C 3 -2.105 54.611 40.592 1 58.94 ? CEP COA 600 A 1 HETATM 36 C CAP COA . . . C 3 0.348 54.234 41.516 1 58.94 ? CAP COA 600 A 1 HETATM 37 O OAP COA . . . C 3 1.34 53.333 41.052 1 58.94 ? OAP COA 600 A 1 HETATM 38 C C9P COA . . . C 3 -0.35 53.615 42.742 1 58.94 ? C9P COA 600 A 1 HETATM 39 O O9P COA . . . C 3 -1.047 52.665 42.589 1 58.94 ? O9P COA 600 A 1 HETATM 40 N N8P COA . . . C 3 0.247 53.856 43.966 1 58.94 ? N8P COA 600 A 1 HETATM 41 C C7P COA . . . C 3 0.283 55.128 44.7 1 58.94 ? C7P COA 600 A 1 HETATM 42 C C6P COA . . . C 3 -0.968 56.025 44.609 1 58.94 ? C6P COA 600 A 1 HETATM 43 C C5P COA . . . C 3 -0.693 57.391 43.987 1 58.94 ? C5P COA 600 A 1 HETATM 44 O O5P COA . . . C 3 0.393 57.722 43.585 1 58.94 ? O5P COA 600 A 1 HETATM 45 N N4P COA . . . C 3 -1.797 58.182 43.823 1 58.94 ? N4P COA 600 A 1 HETATM 46 C C3P COA . . . C 3 -1.849 59.318 42.845 1 58.94 ? C3P COA 600 A 1 HETATM 47 C C2P COA . . . C 3 -3.027 60.322 43.089 1 58.94 ? C2P COA 600 A 1 HETATM 48 S S1P COA . . . C 3 -3.917 59.956 44.654 1 58.94 ? S1P COA 600 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 48 #