data_1S8G
#
_model_server_result.job_id            xSonFHyKsjTZN_MWLr7mOQ 
_model_server_result.datetime_utc      '2024-12-26 13:15:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1s8g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":136}' 
#
_entry.id    1S8G 
#
_exptl.entry_id    1S8G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1S8G 
_cell.length_a            81.897 
_cell.length_b            81.897 
_cell.length_c            49.902 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1S8G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 26 A CYS 27 1_555 A SG CYS 115 A CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf2 A SG CYS 28 A CYS 29 1_555 A SG CYS 44 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 A SG CYS 43 A CYS 44 1_555 A SG CYS 95 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf4 A SG CYS 49 A CYS 50 1_555 A SG CYS 121 A CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 A SG CYS 50 A CYS 51 1_555 A SG CYS 88 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf6 A SG CYS 57 A CYS 61 1_555 A SG CYS 81 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf7 A SG CYS 75 A CYS 84 1_555 A SG CYS 86 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 166 n n 
C1 C2 GOL sing 167 n n 
C1 H11 GOL sing 168 n n 
C1 H12 GOL sing 169 n n 
O1 HO1 GOL sing 170 n n 
C2 O2 GOL sing 171 n n 
C2 C3 GOL sing 172 n n 
C2 H2 GOL sing 173 n n 
O2 HO2 GOL sing 174 n n 
C3 O3 GOL sing 175 n n 
C3 H31 GOL sing 176 n n 
C3 H32 GOL sing 177 n n 
O3 HO3 GOL sing 178 n n 
#
_atom_sites.entry_id                     1S8G 
_atom_sites.fract_transf_matrix[1][1]    0.01221 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01221 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020039 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 134 134 SO4 SO4 . 
C 3 DAO A 1 135 135 DAO LAU . 
D 4 GOL A 1 136 136 GOL GOL . 
E 5 HOH A 1 201 1 HOH HOH . 
E 5 HOH A 2 202 2 HOH HOH . 
E 5 HOH A 3 203 3 HOH HOH . 
E 5 HOH A 4 204 4 HOH HOH . 
E 5 HOH A 5 205 5 HOH HOH . 
E 5 HOH A 6 206 6 HOH HOH . 
E 5 HOH A 7 207 7 HOH HOH . 
E 5 HOH A 8 208 8 HOH HOH . 
E 5 HOH A 9 209 9 HOH HOH . 
E 5 HOH A 10 210 10 HOH HOH . 
E 5 HOH A 11 211 11 HOH HOH . 
E 5 HOH A 12 212 12 HOH HOH . 
E 5 HOH A 13 213 13 HOH HOH . 
E 5 HOH A 14 214 14 HOH HOH . 
E 5 HOH A 15 215 15 HOH HOH . 
E 5 HOH A 16 216 16 HOH HOH . 
E 5 HOH A 17 217 17 HOH HOH . 
E 5 HOH A 18 218 18 HOH HOH . 
E 5 HOH A 19 219 19 HOH HOH . 
E 5 HOH A 20 220 20 HOH HOH . 
E 5 HOH A 21 221 21 HOH HOH . 
E 5 HOH A 22 222 22 HOH HOH . 
E 5 HOH A 23 223 23 HOH HOH . 
E 5 HOH A 24 224 24 HOH HOH . 
E 5 HOH A 25 225 25 HOH HOH . 
E 5 HOH A 26 226 26 HOH HOH . 
E 5 HOH A 27 227 27 HOH HOH . 
E 5 HOH A 28 228 28 HOH HOH . 
E 5 HOH A 29 229 29 HOH HOH . 
E 5 HOH A 30 230 30 HOH HOH . 
E 5 HOH A 31 231 31 HOH HOH . 
E 5 HOH A 32 232 32 HOH HOH . 
E 5 HOH A 33 233 33 HOH HOH . 
E 5 HOH A 34 234 34 HOH HOH . 
E 5 HOH A 35 235 35 HOH HOH . 
E 5 HOH A 36 236 36 HOH HOH . 
E 5 HOH A 37 237 37 HOH HOH . 
E 5 HOH A 38 238 38 HOH HOH . 
E 5 HOH A 39 239 39 HOH HOH . 
E 5 HOH A 40 240 40 HOH HOH . 
E 5 HOH A 41 241 41 HOH HOH . 
E 5 HOH A 42 242 42 HOH HOH . 
E 5 HOH A 43 243 43 HOH HOH . 
E 5 HOH A 44 244 44 HOH HOH . 
E 5 HOH A 45 245 45 HOH HOH . 
E 5 HOH A 46 246 46 HOH HOH . 
E 5 HOH A 47 247 47 HOH HOH . 
E 5 HOH A 48 248 48 HOH HOH . 
E 5 HOH A 49 249 49 HOH HOH . 
E 5 HOH A 50 250 50 HOH HOH . 
E 5 HOH A 51 251 51 HOH HOH . 
E 5 HOH A 52 252 52 HOH HOH . 
E 5 HOH A 53 253 53 HOH HOH . 
E 5 HOH A 54 254 54 HOH HOH . 
E 5 HOH A 55 255 55 HOH HOH . 
E 5 HOH A 56 256 56 HOH HOH . 
E 5 HOH A 57 257 57 HOH HOH . 
E 5 HOH A 58 258 58 HOH HOH . 
E 5 HOH A 59 259 59 HOH HOH . 
E 5 HOH A 60 260 60 HOH HOH . 
E 5 HOH A 61 261 61 HOH HOH . 
E 5 HOH A 62 262 62 HOH HOH . 
E 5 HOH A 63 263 63 HOH HOH . 
E 5 HOH A 64 264 64 HOH HOH . 
E 5 HOH A 65 265 65 HOH HOH . 
E 5 HOH A 66 266 66 HOH HOH . 
E 5 HOH A 67 267 67 HOH HOH . 
E 5 HOH A 68 268 68 HOH HOH . 
E 5 HOH A 69 269 69 HOH HOH . 
E 5 HOH A 70 270 70 HOH HOH . 
E 5 HOH A 71 271 71 HOH HOH . 
E 5 HOH A 72 272 72 HOH HOH . 
E 5 HOH A 73 273 73 HOH HOH . 
E 5 HOH A 74 274 74 HOH HOH . 
E 5 HOH A 75 275 75 HOH HOH . 
E 5 HOH A 76 276 76 HOH HOH . 
E 5 HOH A 77 277 77 HOH HOH . 
E 5 HOH A 78 278 78 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 19.733 30.089 2.536 1 75.08 ? C1 GOL 136 A 1 
HETATM 2 O O1 GOL . . . D 4 18.93 30.888 3.375 1 74.88 ? O1 GOL 136 A 1 
HETATM 3 C C2 GOL . . . D 4 21.01 30.844 2.184 1 75.15 ? C2 GOL 136 A 1 
HETATM 4 O O2 GOL . . . D 4 20.677 32.037 1.51 1 75.13 ? O2 GOL 136 A 1 
HETATM 5 C C3 GOL . . . D 4 21.907 29.97 1.312 1 75.2 ? C3 GOL 136 A 1 
HETATM 6 O O3 GOL . . . D 4 22.98 30.728 0.795 1 75.05 ? O3 GOL 136 A 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           6 
#