data_1S8L
#
_model_server_result.job_id            p2DV65WjJKXgyBhLevWgqg 
_model_server_result.datetime_utc      '2024-11-17 17:50:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1s8l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":708}' 
#
_entry.id    1S8L 
#
_exptl.entry_id    1S8L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              639.13 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1S8L 
_cell.length_a            52.725 
_cell.length_b            121.335 
_cell.length_c            74.204 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1S8L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
_chem_comp.formula           'C42 H86 O3' 
_chem_comp.formula_weight    639.13 
_chem_comp.id                LI1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'LIPID FRAGMENT' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 LI1 sing 160 n n 
C1 O1 LI1 sing 161 n n 
C1 H11 LI1 sing 162 n n 
C1 H12 LI1 sing 163 n n 
C2 C3 LI1 sing 164 n n 
C2 O2 LI1 sing 165 n n 
C2 H2 LI1 sing 166 n n 
C3 O3 LI1 sing 167 n n 
C3 H31 LI1 sing 168 n n 
C3 H32 LI1 sing 169 n n 
O1 C11 LI1 sing 170 n n 
O2 C41 LI1 sing 171 n n 
O3 HO3 LI1 sing 172 n n 
C41 C42 LI1 sing 173 n n 
C41 H411 LI1 sing 174 n n 
C41 H412 LI1 sing 175 n n 
C42 C43 LI1 sing 176 n n 
C42 H421 LI1 sing 177 n n 
C42 H422 LI1 sing 178 n n 
C43 C44 LI1 sing 179 n n 
C43 C45 LI1 sing 180 n n 
C43 H43 LI1 sing 181 n n 
C44 H441 LI1 sing 182 n n 
C44 H442 LI1 sing 183 n n 
C44 H443 LI1 sing 184 n n 
C45 C46 LI1 sing 185 n n 
C45 H451 LI1 sing 186 n n 
C45 H452 LI1 sing 187 n n 
C46 C47 LI1 sing 188 n n 
C46 H461 LI1 sing 189 n n 
C46 H462 LI1 sing 190 n n 
C47 C48 LI1 sing 191 n n 
C47 H471 LI1 sing 192 n n 
C47 H472 LI1 sing 193 n n 
C48 C49 LI1 sing 194 n n 
C48 C50 LI1 sing 195 n n 
C48 H48 LI1 sing 196 n n 
C49 H491 LI1 sing 197 n n 
C49 H492 LI1 sing 198 n n 
C49 H493 LI1 sing 199 n n 
C50 C51 LI1 sing 200 n n 
C50 H501 LI1 sing 201 n n 
C50 H502 LI1 sing 202 n n 
C51 C52 LI1 sing 203 n n 
C51 H511 LI1 sing 204 n n 
C51 H512 LI1 sing 205 n n 
C52 C53 LI1 sing 206 n n 
C52 H521 LI1 sing 207 n n 
C52 H522 LI1 sing 208 n n 
C53 C55 LI1 sing 209 n n 
C53 H531 LI1 sing 210 n n 
C53 H532 LI1 sing 211 n n 
C55 C56 LI1 sing 212 n n 
C55 H551 LI1 sing 213 n n 
C55 H552 LI1 sing 214 n n 
C56 C57 LI1 sing 215 n n 
C56 H561 LI1 sing 216 n n 
C56 H562 LI1 sing 217 n n 
C57 C58 LI1 sing 218 n n 
C57 H571 LI1 sing 219 n n 
C57 H572 LI1 sing 220 n n 
C58 C59 LI1 sing 221 n n 
C58 C60 LI1 sing 222 n n 
C58 H58 LI1 sing 223 n n 
C59 H591 LI1 sing 224 n n 
C59 H592 LI1 sing 225 n n 
C59 H593 LI1 sing 226 n n 
C60 H601 LI1 sing 227 n n 
C60 H602 LI1 sing 228 n n 
C60 H603 LI1 sing 229 n n 
C11 C12 LI1 sing 230 n n 
C11 H111 LI1 sing 231 n n 
C11 H112 LI1 sing 232 n n 
C12 C13 LI1 sing 233 n n 
C12 H121 LI1 sing 234 n n 
C12 H122 LI1 sing 235 n n 
C13 C14 LI1 sing 236 n n 
C13 C15 LI1 sing 237 n n 
C13 H13 LI1 sing 238 n n 
C14 H141 LI1 sing 239 n n 
C14 H142 LI1 sing 240 n n 
C14 H143 LI1 sing 241 n n 
C15 C16 LI1 sing 242 n n 
C15 H151 LI1 sing 243 n n 
C15 H152 LI1 sing 244 n n 
C16 C17 LI1 sing 245 n n 
C16 H161 LI1 sing 246 n n 
C16 H162 LI1 sing 247 n n 
C17 C18 LI1 sing 248 n n 
C17 H171 LI1 sing 249 n n 
C17 H172 LI1 sing 250 n n 
C18 C19 LI1 sing 251 n n 
C18 C20 LI1 sing 252 n n 
C18 H18 LI1 sing 253 n n 
C19 H191 LI1 sing 254 n n 
C19 H192 LI1 sing 255 n n 
C19 H193 LI1 sing 256 n n 
C20 C21 LI1 sing 257 n n 
C20 H201 LI1 sing 258 n n 
C20 H202 LI1 sing 259 n n 
C21 C22 LI1 sing 260 n n 
C21 H211 LI1 sing 261 n n 
C21 H212 LI1 sing 262 n n 
C22 C23 LI1 sing 263 n n 
C22 H221 LI1 sing 264 n n 
C22 H222 LI1 sing 265 n n 
C23 C24 LI1 sing 266 n n 
C23 C25 LI1 sing 267 n n 
C23 H23 LI1 sing 268 n n 
C24 H241 LI1 sing 269 n n 
C24 H242 LI1 sing 270 n n 
C24 H243 LI1 sing 271 n n 
C25 C26 LI1 sing 272 n n 
C25 H251 LI1 sing 273 n n 
C25 H252 LI1 sing 274 n n 
C26 C27 LI1 sing 275 n n 
C26 H261 LI1 sing 276 n n 
C26 H262 LI1 sing 277 n n 
C27 C28 LI1 sing 278 n n 
C27 H271 LI1 sing 279 n n 
C27 H272 LI1 sing 280 n n 
C28 C29 LI1 sing 281 n n 
C28 C30 LI1 sing 282 n n 
C28 H28 LI1 sing 283 n n 
C29 H291 LI1 sing 284 n n 
C29 H292 LI1 sing 285 n n 
C29 H293 LI1 sing 286 n n 
C30 H301 LI1 sing 287 n n 
C30 H302 LI1 sing 288 n n 
C30 H303 LI1 sing 289 n n 
#
_atom_sites.entry_id                     1S8L 
_atom_sites.fract_transf_matrix[1][1]    0.018966 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008242 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013476 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 RET A 1 301 301 RET RET . 
C 3 LI1 A 1 701 701 LI1 LI1 . 
D 3 LI1 A 1 702 702 LI1 LI1 . 
E 3 LI1 A 1 703 703 LI1 LI1 . 
F 3 LI1 A 1 704 704 LI1 LI1 . 
G 3 LI1 A 1 705 705 LI1 LI1 . 
H 3 LI1 A 1 706 706 LI1 LI1 . 
I 3 LI1 A 1 707 707 LI1 LI1 . 
J 3 LI1 A 1 708 708 LI1 LI1 . 
K 4 HOH A 1 402 402 HOH HOH . 
K 4 HOH A 2 405 405 HOH HOH . 
K 4 HOH A 3 408 408 HOH HOH . 
K 4 HOH A 4 423 423 HOH HOH . 
K 4 HOH A 5 424 424 HOH HOH . 
K 4 HOH A 6 430 430 HOH HOH . 
K 4 HOH A 7 431 431 HOH HOH . 
K 4 HOH A 8 441 441 HOH HOH . 
K 4 HOH A 9 442 442 HOH HOH . 
K 4 HOH A 10 443 443 HOH HOH . 
K 4 HOH A 11 444 444 HOH HOH . 
K 4 HOH A 12 445 445 HOH HOH . 
K 4 HOH A 13 446 446 HOH HOH . 
K 4 HOH A 14 447 447 HOH HOH . 
K 4 HOH A 15 448 448 HOH HOH . 
K 4 HOH A 16 501 501 HOH HOH . 
K 4 HOH A 17 502 502 HOH HOH . 
K 4 HOH A 18 510 510 HOH HOH . 
K 4 HOH A 19 511 511 HOH HOH . 
K 4 HOH A 20 515 515 HOH HOH . 
K 4 HOH A 21 520 520 HOH HOH . 
K 4 HOH A 22 522 522 HOH HOH . 
K 4 HOH A 23 524 524 HOH HOH . 
K 4 HOH A 24 530 530 HOH HOH . 
K 4 HOH A 25 531 531 HOH HOH . 
K 4 HOH A 26 532 532 HOH HOH . 
K 4 HOH A 27 533 533 HOH HOH . 
K 4 HOH A 28 534 534 HOH HOH . 
K 4 HOH A 29 536 536 HOH HOH . 
K 4 HOH A 30 541 541 HOH HOH . 
K 4 HOH A 31 542 542 HOH HOH . 
K 4 HOH A 32 543 543 HOH HOH . 
K 4 HOH A 33 544 544 HOH HOH . 
K 4 HOH A 34 545 545 HOH HOH . 
K 4 HOH A 35 546 546 HOH HOH . 
K 4 HOH A 36 547 547 HOH HOH . 
K 4 HOH A 37 548 548 HOH HOH . 
K 4 HOH A 38 549 549 HOH HOH . 
K 4 HOH A 39 550 550 HOH HOH . 
K 4 HOH A 40 551 551 HOH HOH . 
K 4 HOH A 41 552 552 HOH HOH . 
K 4 HOH A 42 553 553 HOH HOH . 
K 4 HOH A 43 554 554 HOH HOH . 
K 4 HOH A 44 555 555 HOH HOH . 
K 4 HOH A 45 556 556 HOH HOH . 
K 4 HOH A 46 557 557 HOH HOH . 
K 4 HOH A 47 558 558 HOH HOH . 
K 4 HOH A 48 559 559 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C11 LI1 . . . J 3 15.754 46.212 33.587 1 55.08 ? C11 LI1 708 A 1 
HETATM 2 C C12 LI1 . . . J 3 16.568 45.093 34.265 1 55.12 ? C12 LI1 708 A 1 
HETATM 3 C C13 LI1 . . . J 3 16.161 43.751 33.62 1 53.83 ? C13 LI1 708 A 1 
HETATM 4 C C15 LI1 . . . J 3 16.949 42.637 34.347 1 51.2 ? C15 LI1 708 A 1 
HETATM 5 C C16 LI1 . . . J 3 16.305 41.281 34.025 1 46.39 ? C16 LI1 708 A 1 
HETATM 6 C C17 LI1 . . . J 3 16.838 40.208 35.002 1 46.28 ? C17 LI1 708 A 1 
HETATM 7 C C18 LI1 . . . J 3 15.805 39.069 35.034 1 44.1 ? C18 LI1 708 A 1 
HETATM 8 C C20 LI1 . . . J 3 16.478 37.727 34.721 1 42.69 ? C20 LI1 708 A 1 
HETATM 9 C C21 LI1 . . . J 3 15.668 37.005 33.634 1 40.98 ? C21 LI1 708 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           539 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           9 
#