data_1S9I
#
_model_server_result.job_id            O4ape-d-iKyqQbBWFA1Ppw 
_model_server_result.datetime_utc      '2024-11-26 05:39:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1s9i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1002}' 
#
_entry.id    1S9I 
#
_exptl.entry_id    1S9I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              545.297 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-{3,4-DIFLUORO-2-[(2-FLUORO-4-IODOPHENYL)AMINO]PHENYL}-N-(2-MORPHOLIN-4-YLETHYL)-1,3,4-OXADIAZOL-2-AMINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1S9I 
_cell.length_a            161.888 
_cell.length_b            161.888 
_cell.length_c            122.986 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1S9I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A ND2 ASN 145 A ASN 199 1_555 C MG MG . A MG 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? 
metalc ? metalc2 A OD2 ASP 158 A ASP 212 1_555 C MG MG . A MG 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? 
metalc ? metalc3 D O2G ATP . A ATP 535 1_555 C MG MG . A MG 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? 
metalc ? metalc4 D O3B ATP . A ATP 535 1_555 C MG MG . A MG 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
metalc ? metalc5 D O1B ATP . A ATP 535 1_555 C MG MG . A MG 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.024 ? 
metalc ? metalc6 D O2A ATP . A ATP 535 1_555 C MG MG . A MG 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? 
metalc ? metalc7 B OD1 ASN 145 B ASN 199 1_555 F MG MG . B MG 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc8 B OD2 ASP 158 B ASP 212 1_555 F MG MG . B MG 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? 
metalc ? metalc9 G O2A ATP . B ATP 537 1_555 F MG MG . B MG 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.909 ? 
metalc ? metalc10 G O1B ATP . B ATP 537 1_555 F MG MG . B MG 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? 
metalc ? metalc11 G O2G ATP . B ATP 537 1_555 F MG MG . B MG 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? 
#
_chem_comp.formula           'C20 H19 F3 I N5 O2' 
_chem_comp.formula_weight    545.297 
_chem_comp.id                5EA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-{3,4-DIFLUORO-2-[(2-FLUORO-4-IODOPHENYL)AMINO]PHENYL}-N-(2-MORPHOLIN-4-YLETHYL)-1,3,4-OXADIAZOL-2-AMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
I1 C23 5EA sing 1 n n 
C23 C21 5EA doub 2 n y 
C23 C19 5EA sing 3 n y 
C21 C16 5EA sing 4 n y 
C21 H21 5EA sing 5 n n 
C16 C10 5EA doub 6 n y 
C16 H16 5EA sing 7 n n 
C19 C15 5EA doub 8 n y 
C19 H19 5EA sing 9 n n 
C15 F20 5EA sing 10 n n 
C15 C10 5EA sing 11 n y 
C10 N5 5EA sing 12 n n 
N5 C2 5EA sing 13 n n 
N5 HN5 5EA sing 14 n n 
C2 C6 5EA doub 15 n y 
C2 C1 5EA sing 16 n y 
C6 F1 5EA sing 17 n n 
C6 C11 5EA sing 18 n y 
C11 F17 5EA sing 19 n n 
C11 C9 5EA doub 20 n y 
C9 C4 5EA sing 21 n y 
C9 H9 5EA sing 22 n n 
C4 C1 5EA doub 23 n y 
C4 H4 5EA sing 24 n n 
C1 C3 5EA sing 25 n y 
C3 O7 5EA sing 26 n y 
C3 N8 5EA doub 27 n y 
O7 C13 5EA sing 28 n y 
C13 N14 5EA doub 29 n y 
C13 N18 5EA sing 30 n n 
N14 N8 5EA sing 31 n y 
N18 C22 5EA sing 32 n n 
N18 H18 5EA sing 33 n n 
C22 C24 5EA sing 34 n n 
C22 H221 5EA sing 35 n n 
C22 H222 5EA sing 36 n n 
C24 N26 5EA sing 37 n n 
C24 H241 5EA sing 38 n n 
C24 H242 5EA sing 39 n n 
N26 C27 5EA sing 40 n n 
N26 C28 5EA sing 41 n n 
C27 C29 5EA sing 42 n n 
C27 H271 5EA sing 43 n n 
C27 H272 5EA sing 44 n n 
C29 O31 5EA sing 45 n n 
C29 H291 5EA sing 46 n n 
C29 H292 5EA sing 47 n n 
O31 C30 5EA sing 48 n n 
C30 C28 5EA sing 49 n n 
C30 H301 5EA sing 50 n n 
C30 H302 5EA sing 51 n n 
C28 H281 5EA sing 52 n n 
C28 H282 5EA sing 53 n n 
#
_atom_sites.entry_id                     1S9I 
_atom_sites.fract_transf_matrix[1][1]    0.006177 
_atom_sites.fract_transf_matrix[1][2]    0.003566 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007133 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008131 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 536 536 MG MG . 
D 3 ATP A 1 535 535 ATP ATP . 
E 4 5EA A 1 1001 1001 5EA 5EA . 
F 2 MG B 1 538 538 MG MG . 
G 3 ATP B 1 537 537 ATP ATP . 
H 4 5EA B 1 1002 1002 5EA 5EA . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 I I1 5EA . . . H 4 24.149 126.256 43.539 1 46.3 ? I1 5EA 1002 B 1 
HETATM 2 C C23 5EA . . . H 4 25.033 124.395 43.189 1 41.49 ? C23 5EA 1002 B 1 
HETATM 3 C C21 5EA . . . H 4 24.75 123.692 42.016 1 40.25 ? C21 5EA 1002 B 1 
HETATM 4 C C16 5EA . . . H 4 25.329 122.448 41.766 1 38.54 ? C16 5EA 1002 B 1 
HETATM 5 C C19 5EA . . . H 4 25.903 123.874 44.144 1 40.35 ? C19 5EA 1002 B 1 
HETATM 6 C C15 5EA . . . H 4 26.505 122.638 43.931 1 38.73 ? C15 5EA 1002 B 1 
HETATM 7 F F20 5EA . . . H 4 27.345 122.14 44.849 1 38.86 ? F20 5EA 1002 B 1 
HETATM 8 C C10 5EA . . . H 4 26.214 121.877 42.685 1 37.74 ? C10 5EA 1002 B 1 
HETATM 9 N N5 5EA . . . H 4 26.825 120.671 42.503 1 35.64 ? N5 5EA 1002 B 1 
HETATM 10 C C2 5EA . . . H 4 26.732 119.857 41.417 1 33.93 ? C2 5EA 1002 B 1 
HETATM 11 C C6 5EA . . . H 4 26.752 120.373 40.017 1 33.47 ? C6 5EA 1002 B 1 
HETATM 12 F F1 5EA . . . H 4 26.849 121.689 39.759 1 33.13 ? F1 5EA 1002 B 1 
HETATM 13 C C11 5EA . . . H 4 26.646 119.401 38.892 1 33.32 ? C11 5EA 1002 B 1 
HETATM 14 F F17 5EA . . . H 4 26.651 119.826 37.612 1 33.67 ? F17 5EA 1002 B 1 
HETATM 15 C C9 5EA . . . H 4 26.546 118.039 39.16 1 33.03 ? C9 5EA 1002 B 1 
HETATM 16 C C4 5EA . . . H 4 26.536 117.552 40.465 1 33.07 ? C4 5EA 1002 B 1 
HETATM 17 C C1 5EA . . . H 4 26.621 118.377 41.586 1 33.41 ? C1 5EA 1002 B 1 
HETATM 18 C C3 5EA . . . H 4 26.612 117.713 42.935 1 33.6 ? C3 5EA 1002 B 1 
HETATM 19 O O7 5EA . . . H 4 26.664 116.27 43.094 1 33.65 ? O7 5EA 1002 B 1 
HETATM 20 C C13 5EA . . . H 4 26.649 116.222 44.545 1 33.71 ? C13 5EA 1002 B 1 
HETATM 21 N N14 5EA . . . H 4 26.599 117.441 45.078 1 33.57 ? N14 5EA 1002 B 1 
HETATM 22 N N8 5EA . . . H 4 26.584 118.33 44.119 1 33.79 ? N8 5EA 1002 B 1 
HETATM 23 N N18 5EA . . . H 4 26.678 115.081 45.235 1 33.91 ? N18 5EA 1002 B 1 
HETATM 24 C C22 5EA . . . H 4 26.528 113.781 44.597 1 33.74 ? C22 5EA 1002 B 1 
HETATM 25 C C24 5EA . . . H 4 25.081 113.507 44.186 1 33.85 ? C24 5EA 1002 B 1 
HETATM 26 N N26 5EA . . . H 4 25.057 112.213 43.513 1 34.19 ? N26 5EA 1002 B 1 
HETATM 27 C C27 5EA . . . H 4 24.852 111.037 44.358 1 34.32 ? C27 5EA 1002 B 1 
HETATM 28 C C29 5EA . . . H 4 24.831 109.7 43.616 1 34.33 ? C29 5EA 1002 B 1 
HETATM 29 O O31 5EA . . . H 4 24.997 109.671 42.193 1 34.6 ? O31 5EA 1002 B 1 
HETATM 30 C C30 5EA . . . H 4 25.189 110.845 41.393 1 34.42 ? C30 5EA 1002 B 1 
HETATM 31 C C28 5EA . . . H 4 25.224 112.222 42.06 1 34.4 ? C28 5EA 1002 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#