data_1SCU # _model_server_result.job_id hU_w2MQIvuuFJvVE9TBNFw _model_server_result.datetime_utc '2024-12-04 04:36:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1scu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":289}' # _entry.id 1SCU # _exptl.entry_id 1SCU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1SCU _cell.length_a 98.47 _cell.length_b 98.47 _cell.length_c 400.6 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SCU _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 245 A GLY 245 1_555 A N NEP 246 A NEP 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale2 A C NEP 246 A NEP 246 1_555 A N ALA 247 A ALA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.29 ? covale ? covale3 C C GLY 245 D GLY 245 1_555 C N NEP 246 D NEP 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.295 ? covale ? covale4 C C NEP 246 D NEP 246 1_555 C N ALA 247 D ALA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.271 ? # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1SCU _atom_sites.fract_transf_matrix[1][1] 0.010155 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010155 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 COA A 1 289 289 COA COA . F 3 COA D 1 289 289 COA COA . G 4 HOH A 1 290 290 HOH HOH . G 4 HOH A 2 291 291 HOH HOH . G 4 HOH A 3 292 292 HOH HOH . G 4 HOH A 4 293 293 HOH HOH . G 4 HOH A 5 294 294 HOH HOH . G 4 HOH A 6 295 295 HOH HOH . G 4 HOH A 7 296 296 HOH HOH . G 4 HOH A 8 297 297 HOH HOH . G 4 HOH A 9 298 298 HOH HOH . G 4 HOH A 10 299 299 HOH HOH . G 4 HOH A 11 300 300 HOH HOH . G 4 HOH A 12 301 301 HOH HOH . G 4 HOH A 13 302 302 HOH HOH . G 4 HOH A 14 303 303 HOH HOH . G 4 HOH A 15 304 304 HOH HOH . G 4 HOH A 16 305 305 HOH HOH . G 4 HOH A 17 306 306 HOH HOH . G 4 HOH A 18 307 307 HOH HOH . G 4 HOH A 19 308 308 HOH HOH . G 4 HOH A 20 309 309 HOH HOH . G 4 HOH A 21 310 310 HOH HOH . G 4 HOH A 22 311 311 HOH HOH . H 4 HOH B 1 389 389 HOH HOH . H 4 HOH B 2 390 390 HOH HOH . H 4 HOH B 3 391 391 HOH HOH . H 4 HOH B 4 392 392 HOH HOH . H 4 HOH B 5 393 393 HOH HOH . H 4 HOH B 6 394 394 HOH HOH . H 4 HOH B 7 395 395 HOH HOH . H 4 HOH B 8 396 396 HOH HOH . H 4 HOH B 9 397 397 HOH HOH . H 4 HOH B 10 398 398 HOH HOH . H 4 HOH B 11 399 399 HOH HOH . H 4 HOH B 12 400 400 HOH HOH . H 4 HOH B 13 401 401 HOH HOH . H 4 HOH B 14 402 402 HOH HOH . H 4 HOH B 15 403 403 HOH HOH . H 4 HOH B 16 404 404 HOH HOH . H 4 HOH B 17 405 405 HOH HOH . H 4 HOH B 18 406 406 HOH HOH . H 4 HOH B 19 407 407 HOH HOH . H 4 HOH B 20 408 408 HOH HOH . H 4 HOH B 21 409 409 HOH HOH . H 4 HOH B 22 410 410 HOH HOH . H 4 HOH B 23 411 411 HOH HOH . H 4 HOH B 24 412 412 HOH HOH . H 4 HOH B 25 413 413 HOH HOH . H 4 HOH B 26 414 414 HOH HOH . H 4 HOH B 27 415 415 HOH HOH . H 4 HOH B 28 416 416 HOH HOH . H 4 HOH B 29 417 417 HOH HOH . H 4 HOH B 30 418 418 HOH HOH . H 4 HOH B 31 419 419 HOH HOH . H 4 HOH B 32 420 420 HOH HOH . H 4 HOH B 33 421 421 HOH HOH . I 4 HOH D 1 291 291 HOH HOH . I 4 HOH D 2 292 292 HOH HOH . I 4 HOH D 3 293 293 HOH HOH . I 4 HOH D 4 294 294 HOH HOH . I 4 HOH D 5 295 295 HOH HOH . I 4 HOH D 6 296 296 HOH HOH . I 4 HOH D 7 297 297 HOH HOH . I 4 HOH D 8 298 298 HOH HOH . I 4 HOH D 9 299 299 HOH HOH . I 4 HOH D 10 300 300 HOH HOH . I 4 HOH D 11 301 301 HOH HOH . I 4 HOH D 12 302 302 HOH HOH . I 4 HOH D 13 303 303 HOH HOH . I 4 HOH D 14 304 304 HOH HOH . I 4 HOH D 15 305 305 HOH HOH . I 4 HOH D 16 306 306 HOH HOH . I 4 HOH D 17 307 307 HOH HOH . I 4 HOH D 18 308 308 HOH HOH . I 4 HOH D 19 309 309 HOH HOH . I 4 HOH D 20 310 310 HOH HOH . I 4 HOH D 21 311 311 HOH HOH . I 4 HOH D 22 312 312 HOH HOH . I 4 HOH D 23 313 313 HOH HOH . I 4 HOH D 24 314 314 HOH HOH . I 4 HOH D 25 315 315 HOH HOH . J 4 HOH E 1 389 389 HOH HOH . J 4 HOH E 2 390 390 HOH HOH . J 4 HOH E 3 391 391 HOH HOH . J 4 HOH E 4 392 392 HOH HOH . J 4 HOH E 5 393 393 HOH HOH . J 4 HOH E 6 394 394 HOH HOH . J 4 HOH E 7 395 395 HOH HOH . J 4 HOH E 8 396 396 HOH HOH . J 4 HOH E 9 397 397 HOH HOH . J 4 HOH E 10 398 398 HOH HOH . J 4 HOH E 11 399 399 HOH HOH . J 4 HOH E 12 400 400 HOH HOH . J 4 HOH E 13 401 401 HOH HOH . J 4 HOH E 14 402 402 HOH HOH . J 4 HOH E 15 403 403 HOH HOH . J 4 HOH E 16 404 404 HOH HOH . J 4 HOH E 17 405 405 HOH HOH . J 4 HOH E 18 406 406 HOH HOH . J 4 HOH E 19 407 407 HOH HOH . J 4 HOH E 20 408 408 HOH HOH . J 4 HOH E 21 409 409 HOH HOH . J 4 HOH E 22 410 410 HOH HOH . J 4 HOH E 23 411 411 HOH HOH . J 4 HOH E 24 412 412 HOH HOH . J 4 HOH E 25 413 413 HOH HOH . J 4 HOH E 26 414 414 HOH HOH . J 4 HOH E 27 415 415 HOH HOH . J 4 HOH E 28 416 416 HOH HOH . J 4 HOH E 29 417 417 HOH HOH . J 4 HOH E 30 418 418 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . E 3 30.891 62.319 49.141 1 54.43 ? N1A COA 289 A 1 HETATM 2 C C2A COA . . . E 3 30.078 63.364 49.372 1 49.62 ? C2A COA 289 A 1 HETATM 3 N N3A COA . . . E 3 28.899 63.405 49.995 1 43.99 ? N3A COA 289 A 1 HETATM 4 C C4A COA . . . E 3 28.491 62.192 50.322 1 42.83 ? C4A COA 289 A 1 HETATM 5 C C5A COA . . . E 3 29.195 61.007 50.159 1 46.91 ? C5A COA 289 A 1 HETATM 6 C C6A COA . . . E 3 30.487 61.087 49.539 1 51.71 ? C6A COA 289 A 1 HETATM 7 N N6A COA . . . E 3 31.313 60.048 49.303 1 50.4 ? N6A COA 289 A 1 HETATM 8 N N7A COA . . . E 3 28.452 59.955 50.67 1 43.14 ? N7A COA 289 A 1 HETATM 9 C C8A COA . . . E 3 27.354 60.511 51.117 1 41.53 ? C8A COA 289 A 1 HETATM 10 N N9A COA . . . E 3 27.298 61.86 50.892 1 42.23 ? N9A COA 289 A 1 HETATM 11 C C1B COA . . . E 3 26.307 62.79 51.397 1 43.99 ? C1B COA 289 A 1 HETATM 12 C C2B COA . . . E 3 24.881 62.287 51.439 1 43.6 ? C2B COA 289 A 1 HETATM 13 O O2B COA . . . E 3 24.3 62.204 50.113 1 36.83 ? O2B COA 289 A 1 HETATM 14 C C3B COA . . . E 3 24.301 63.337 52.434 1 46.35 ? C3B COA 289 A 1 HETATM 15 O O3B COA . . . E 3 23.816 64.489 51.744 1 56.29 ? O3B COA 289 A 1 HETATM 16 P P3B COA . . . E 3 22.337 64.498 51.114 1 59.82 ? P3B COA 289 A 1 HETATM 17 O O7A COA . . . E 3 22.508 65.323 49.896 1 56.33 ? O7A COA 289 A 1 HETATM 18 O O8A COA . . . E 3 22.293 63.512 49.995 1 61.19 ? O8A COA 289 A 1 HETATM 19 O O9A COA . . . E 3 21.472 64.037 52.238 1 62.78 ? O9A COA 289 A 1 HETATM 20 C C4B COA . . . E 3 25.521 63.783 53.253 1 42.21 ? C4B COA 289 A 1 HETATM 21 O O4B COA . . . E 3 26.58 62.982 52.779 1 44.57 ? O4B COA 289 A 1 HETATM 22 C C5B COA . . . E 3 25.43 63.732 54.753 1 39.53 ? C5B COA 289 A 1 HETATM 23 O O5B COA . . . E 3 24.094 64.168 55.053 1 41.34 ? O5B COA 289 A 1 HETATM 24 P P1A COA . . . E 3 23.325 63.339 56.158 1 44.38 ? P1A COA 289 A 1 HETATM 25 O O1A COA . . . E 3 22.451 64.221 56.941 1 45.58 ? O1A COA 289 A 1 HETATM 26 O O2A COA . . . E 3 22.817 62.068 55.575 1 48.79 ? O2A COA 289 A 1 HETATM 27 O O3A COA . . . E 3 24.265 63.439 57.443 1 39.86 ? O3A COA 289 A 1 HETATM 28 P P2A COA . . . E 3 24.42 64.483 58.624 1 41.73 ? P2A COA 289 A 1 HETATM 29 O O4A COA . . . E 3 24.96 65.785 58.108 1 38.4 ? O4A COA 289 A 1 HETATM 30 O O5A COA . . . E 3 23.151 64.511 59.422 1 44.73 ? O5A COA 289 A 1 HETATM 31 O O6A COA . . . E 3 25.551 63.73 59.498 1 46.06 ? O6A COA 289 A 1 HETATM 32 C CBP COA . . . E 3 27.857 63.01 59.844 1 49.17 ? CBP COA 289 A 1 HETATM 33 C CCP COA . . . E 3 26.698 63.101 58.852 1 49.28 ? CCP COA 289 A 1 HETATM 34 C CDP COA . . . E 3 27.853 64.35 60.56 1 46.8 ? CDP COA 289 A 1 HETATM 35 C CEP COA . . . E 3 29.201 62.827 59.145 1 44.88 ? CEP COA 289 A 1 HETATM 36 C CAP COA . . . E 3 27.627 61.879 60.882 1 57.57 ? CAP COA 289 A 1 HETATM 37 O OAP COA . . . E 3 28.189 60.58 60.607 1 58.08 ? OAP COA 289 A 1 HETATM 38 C C9P COA . . . E 3 28.221 62.354 62.178 1 62.16 ? C9P COA 289 A 1 HETATM 39 O O9P COA . . . E 3 27.684 63.238 62.849 1 64.79 ? O9P COA 289 A 1 HETATM 40 N N8P COA . . . E 3 29.347 61.819 62.55 1 63.98 ? N8P COA 289 A 1 HETATM 41 C C7P COA . . . E 3 29.862 62.322 63.804 1 67.55 ? C7P COA 289 A 1 HETATM 42 C C6P COA . . . E 3 28.968 63.434 64.365 1 69.67 ? C6P COA 289 A 1 HETATM 43 C C5P COA . . . E 3 29.62 64.09 65.573 1 75.08 ? C5P COA 289 A 1 HETATM 44 O O5P COA . . . E 3 29.272 63.779 66.719 1 76.87 ? O5P COA 289 A 1 HETATM 45 N N4P COA . . . E 3 30.583 64.992 65.3 1 77.09 ? N4P COA 289 A 1 HETATM 46 C C3P COA . . . E 3 31.334 65.687 66.332 1 75.89 ? C3P COA 289 A 1 HETATM 47 C C2P COA . . . E 3 32.744 65.124 66.464 1 72.42 ? C2P COA 289 A 1 HETATM 48 S S1P COA . . . E 3 33.915 66.071 65.485 1 73.48 ? S1P COA 289 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 225 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 48 #