data_1SCU # _model_server_result.job_id 9PpHAXtnm6UtOnvdP8yzvw _model_server_result.datetime_utc '2024-12-04 04:06:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1scu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":289}' # _entry.id 1SCU # _exptl.entry_id 1SCU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1SCU _cell.length_a 98.47 _cell.length_b 98.47 _cell.length_c 400.6 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SCU _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 245 A GLY 245 1_555 A N NEP 246 A NEP 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale2 A C NEP 246 A NEP 246 1_555 A N ALA 247 A ALA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.29 ? covale ? covale3 C C GLY 245 D GLY 245 1_555 C N NEP 246 D NEP 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.295 ? covale ? covale4 C C NEP 246 D NEP 246 1_555 C N ALA 247 D ALA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.271 ? # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1SCU _atom_sites.fract_transf_matrix[1][1] 0.010155 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010155 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 COA A 1 289 289 COA COA . F 3 COA D 1 289 289 COA COA . G 4 HOH A 1 290 290 HOH HOH . G 4 HOH A 2 291 291 HOH HOH . G 4 HOH A 3 292 292 HOH HOH . G 4 HOH A 4 293 293 HOH HOH . G 4 HOH A 5 294 294 HOH HOH . G 4 HOH A 6 295 295 HOH HOH . G 4 HOH A 7 296 296 HOH HOH . G 4 HOH A 8 297 297 HOH HOH . G 4 HOH A 9 298 298 HOH HOH . G 4 HOH A 10 299 299 HOH HOH . G 4 HOH A 11 300 300 HOH HOH . G 4 HOH A 12 301 301 HOH HOH . G 4 HOH A 13 302 302 HOH HOH . G 4 HOH A 14 303 303 HOH HOH . G 4 HOH A 15 304 304 HOH HOH . G 4 HOH A 16 305 305 HOH HOH . G 4 HOH A 17 306 306 HOH HOH . G 4 HOH A 18 307 307 HOH HOH . G 4 HOH A 19 308 308 HOH HOH . G 4 HOH A 20 309 309 HOH HOH . G 4 HOH A 21 310 310 HOH HOH . G 4 HOH A 22 311 311 HOH HOH . H 4 HOH B 1 389 389 HOH HOH . H 4 HOH B 2 390 390 HOH HOH . H 4 HOH B 3 391 391 HOH HOH . H 4 HOH B 4 392 392 HOH HOH . H 4 HOH B 5 393 393 HOH HOH . H 4 HOH B 6 394 394 HOH HOH . H 4 HOH B 7 395 395 HOH HOH . H 4 HOH B 8 396 396 HOH HOH . H 4 HOH B 9 397 397 HOH HOH . H 4 HOH B 10 398 398 HOH HOH . H 4 HOH B 11 399 399 HOH HOH . H 4 HOH B 12 400 400 HOH HOH . H 4 HOH B 13 401 401 HOH HOH . H 4 HOH B 14 402 402 HOH HOH . H 4 HOH B 15 403 403 HOH HOH . H 4 HOH B 16 404 404 HOH HOH . H 4 HOH B 17 405 405 HOH HOH . H 4 HOH B 18 406 406 HOH HOH . H 4 HOH B 19 407 407 HOH HOH . H 4 HOH B 20 408 408 HOH HOH . H 4 HOH B 21 409 409 HOH HOH . H 4 HOH B 22 410 410 HOH HOH . H 4 HOH B 23 411 411 HOH HOH . H 4 HOH B 24 412 412 HOH HOH . H 4 HOH B 25 413 413 HOH HOH . H 4 HOH B 26 414 414 HOH HOH . H 4 HOH B 27 415 415 HOH HOH . H 4 HOH B 28 416 416 HOH HOH . H 4 HOH B 29 417 417 HOH HOH . H 4 HOH B 30 418 418 HOH HOH . H 4 HOH B 31 419 419 HOH HOH . H 4 HOH B 32 420 420 HOH HOH . H 4 HOH B 33 421 421 HOH HOH . I 4 HOH D 1 291 291 HOH HOH . I 4 HOH D 2 292 292 HOH HOH . I 4 HOH D 3 293 293 HOH HOH . I 4 HOH D 4 294 294 HOH HOH . I 4 HOH D 5 295 295 HOH HOH . I 4 HOH D 6 296 296 HOH HOH . I 4 HOH D 7 297 297 HOH HOH . I 4 HOH D 8 298 298 HOH HOH . I 4 HOH D 9 299 299 HOH HOH . I 4 HOH D 10 300 300 HOH HOH . I 4 HOH D 11 301 301 HOH HOH . I 4 HOH D 12 302 302 HOH HOH . I 4 HOH D 13 303 303 HOH HOH . I 4 HOH D 14 304 304 HOH HOH . I 4 HOH D 15 305 305 HOH HOH . I 4 HOH D 16 306 306 HOH HOH . I 4 HOH D 17 307 307 HOH HOH . I 4 HOH D 18 308 308 HOH HOH . I 4 HOH D 19 309 309 HOH HOH . I 4 HOH D 20 310 310 HOH HOH . I 4 HOH D 21 311 311 HOH HOH . I 4 HOH D 22 312 312 HOH HOH . I 4 HOH D 23 313 313 HOH HOH . I 4 HOH D 24 314 314 HOH HOH . I 4 HOH D 25 315 315 HOH HOH . J 4 HOH E 1 389 389 HOH HOH . J 4 HOH E 2 390 390 HOH HOH . J 4 HOH E 3 391 391 HOH HOH . J 4 HOH E 4 392 392 HOH HOH . J 4 HOH E 5 393 393 HOH HOH . J 4 HOH E 6 394 394 HOH HOH . J 4 HOH E 7 395 395 HOH HOH . J 4 HOH E 8 396 396 HOH HOH . J 4 HOH E 9 397 397 HOH HOH . J 4 HOH E 10 398 398 HOH HOH . J 4 HOH E 11 399 399 HOH HOH . J 4 HOH E 12 400 400 HOH HOH . J 4 HOH E 13 401 401 HOH HOH . J 4 HOH E 14 402 402 HOH HOH . J 4 HOH E 15 403 403 HOH HOH . J 4 HOH E 16 404 404 HOH HOH . J 4 HOH E 17 405 405 HOH HOH . J 4 HOH E 18 406 406 HOH HOH . J 4 HOH E 19 407 407 HOH HOH . J 4 HOH E 20 408 408 HOH HOH . J 4 HOH E 21 409 409 HOH HOH . J 4 HOH E 22 410 410 HOH HOH . J 4 HOH E 23 411 411 HOH HOH . J 4 HOH E 24 412 412 HOH HOH . J 4 HOH E 25 413 413 HOH HOH . J 4 HOH E 26 414 414 HOH HOH . J 4 HOH E 27 415 415 HOH HOH . J 4 HOH E 28 416 416 HOH HOH . J 4 HOH E 29 417 417 HOH HOH . J 4 HOH E 30 418 418 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . F 3 21.749 4.682 69.018 1 38.33 ? N1A COA 289 D 1 HETATM 2 C C2A COA . . . F 3 21.793 4.283 70.291 1 40.91 ? C2A COA 289 D 1 HETATM 3 N N3A COA . . . F 3 22.286 4.905 71.361 1 41.45 ? N3A COA 289 D 1 HETATM 4 C C4A COA . . . F 3 22.747 6.125 71.024 1 40.96 ? C4A COA 289 D 1 HETATM 5 C C5A COA . . . F 3 22.743 6.705 69.758 1 38.17 ? C5A COA 289 D 1 HETATM 6 C C6A COA . . . F 3 22.194 5.915 68.702 1 37.85 ? C6A COA 289 D 1 HETATM 7 N N6A COA . . . F 3 22.036 6.335 67.435 1 36.77 ? N6A COA 289 D 1 HETATM 8 N N7A COA . . . F 3 23.317 7.968 69.808 1 37.74 ? N7A COA 289 D 1 HETATM 9 C C8A COA . . . F 3 23.635 8.129 71.085 1 39.29 ? C8A COA 289 D 1 HETATM 10 N N9A COA . . . F 3 23.325 7.044 71.87 1 36.33 ? N9A COA 289 D 1 HETATM 11 C C1B COA . . . F 3 23.48 6.875 73.275 1 26.71 ? C1B COA 289 D 1 HETATM 12 C C2B COA . . . F 3 24.62 7.633 73.916 1 29.93 ? C2B COA 289 D 1 HETATM 13 O O2B COA . . . F 3 25.778 6.856 73.758 1 32.46 ? O2B COA 289 D 1 HETATM 14 C C3B COA . . . F 3 24.147 7.639 75.396 1 29.29 ? C3B COA 289 D 1 HETATM 15 O O3B COA . . . F 3 24.607 6.49 76.092 1 29.1 ? O3B COA 289 D 1 HETATM 16 P P3B COA . . . F 3 26.18 6.385 76.419 1 38.04 ? P3B COA 289 D 1 HETATM 17 O O7A COA . . . F 3 26.367 4.934 76.666 1 42.98 ? O7A COA 289 D 1 HETATM 18 O O8A COA . . . F 3 26.981 7.052 75.373 1 36.42 ? O8A COA 289 D 1 HETATM 19 O O9A COA . . . F 3 26.466 7.072 77.718 1 40.15 ? O9A COA 289 D 1 HETATM 20 C C4B COA . . . F 3 22.624 7.54 75.289 1 26.56 ? C4B COA 289 D 1 HETATM 21 O O4B COA . . . F 3 22.346 7.41 73.861 1 22.89 ? O4B COA 289 D 1 HETATM 22 C C5B COA . . . F 3 21.898 8.711 75.913 1 24.14 ? C5B COA 289 D 1 HETATM 23 O O5B COA . . . F 3 22.296 8.796 77.241 1 24.99 ? O5B COA 289 D 1 HETATM 24 P P1A COA . . . F 3 22.542 10.208 77.926 1 29.58 ? P1A COA 289 D 1 HETATM 25 O O1A COA . . . F 3 22.871 9.832 79.313 1 25.62 ? O1A COA 289 D 1 HETATM 26 O O2A COA . . . F 3 23.584 10.961 77.141 1 24.73 ? O2A COA 289 D 1 HETATM 27 O O3A COA . . . F 3 21.139 10.989 77.707 1 33.23 ? O3A COA 289 D 1 HETATM 28 P P2A COA . . . F 3 20.024 10.798 78.885 1 34.87 ? P2A COA 289 D 1 HETATM 29 O O4A COA . . . F 3 20.082 9.361 79.361 1 36.11 ? O4A COA 289 D 1 HETATM 30 O O5A COA . . . F 3 20.267 11.89 79.888 1 35.18 ? O5A COA 289 D 1 HETATM 31 O O6A COA . . . F 3 18.617 10.967 78.15 1 19.15 ? O6A COA 289 D 1 HETATM 32 C CBP COA . . . F 3 17.046 11.518 76.248 1 30.23 ? CBP COA 289 D 1 HETATM 33 C CCP COA . . . F 3 18.507 11.369 76.777 1 22.34 ? CCP COA 289 D 1 HETATM 34 C CDP COA . . . F 3 16.082 10.66 77.069 1 26.14 ? CDP COA 289 D 1 HETATM 35 C CEP COA . . . F 3 17.032 11 74.796 1 36.38 ? CEP COA 289 D 1 HETATM 36 C CAP COA . . . F 3 16.555 12.987 76.264 1 34.16 ? CAP COA 289 D 1 HETATM 37 O OAP COA . . . F 3 16.362 13.573 74.958 1 32.53 ? OAP COA 289 D 1 HETATM 38 C C9P COA . . . F 3 15.276 13.126 77.091 1 45.62 ? C9P COA 289 D 1 HETATM 39 O O9P COA . . . F 3 15.32 12.989 78.318 1 53.04 ? O9P COA 289 D 1 HETATM 40 N N8P COA . . . F 3 14.144 13.435 76.441 1 45.85 ? N8P COA 289 D 1 HETATM 41 C C7P COA . . . F 3 12.877 13.631 77.155 1 48.1 ? C7P COA 289 D 1 HETATM 42 C C6P COA . . . F 3 12.759 12.947 78.54 1 51.91 ? C6P COA 289 D 1 HETATM 43 C C5P COA . . . F 3 11.323 12.997 79.143 1 55.44 ? C5P COA 289 D 1 HETATM 44 O O5P COA . . . F 3 10.891 14.019 79.712 1 59.38 ? O5P COA 289 D 1 HETATM 45 N N4P COA . . . F 3 10.569 11.902 79.01 1 49.35 ? N4P COA 289 D 1 HETATM 46 C C3P COA . . . F 3 9.25 11.833 79.563 1 47.89 ? C3P COA 289 D 1 HETATM 47 C C2P COA . . . F 3 8.29 12.64 78.757 1 55.57 ? C2P COA 289 D 1 HETATM 48 S S1P COA . . . F 3 7.966 11.783 77.223 1 66.64 ? S1P COA 289 D 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 48 #