data_1SEN # _model_server_result.job_id j2sxh_1Klcu6f-1HF1NtIQ _model_server_result.datetime_utc '2024-10-13 02:27:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1sen # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1002}' # _entry.id 1SEN # _exptl.entry_id 1SEN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PLATINUM (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1SEN _cell.length_a 48.986 _cell.length_b 50.556 _cell.length_c 59.386 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SEN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 58 A CYS 66 1_555 A SG CYS 61 A CYS 69 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.381 ? metalc ? metalc1 B PT PT . A PT 1001 1_555 C CL CL . A CL 1003 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.297 ? metalc ? metalc2 B PT PT . A PT 1001 1_555 D CL CL . A CL 1004 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.269 ? metalc ? metalc3 B PT PT . A PT 1001 1_555 E CL CL . A CL 1005 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.197 ? metalc ? metalc4 B PT PT . A PT 1001 1_555 A SG CYS 58 A CYS 66 1_555 ? A ? ? A ? ? ? ? ? ? ? 3.358 ? metalc ? metalc5 B PT PT . A PT 1001 1_555 A N GLY 59 A GLY 67 1_555 ? A ? ? ? ? ? ? ? ? ? ? 3.521 ? metalc ? metalc6 B PT PT . A PT 1001 1_555 A SG CYS 58 A CYS 66 1_555 ? B ? ? B ? ? ? ? ? ? ? 3.188 ? metalc ? metalc7 F PT PT . A PT 1002 1_555 A NZ LYS 55 A LYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.384 ? # _chem_comp.formula 'Pt 2' _chem_comp.formula_weight 195.078 _chem_comp.id PT _chem_comp.mon_nstd_flag . _chem_comp.name 'PLATINUM (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1SEN _atom_sites.fract_transf_matrix[1][1] 0.020414 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01978 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016839 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PT A 1 1001 1001 PT PT . C 3 CL A 1 1003 1003 CL CL . D 3 CL A 1 1004 1004 CL CL . E 3 CL A 1 1005 1005 CL CL . F 2 PT A 1 1002 1002 PT PT . G 4 HOH A 1 201 201 HOH HOH . G 4 HOH A 2 202 202 HOH HOH . G 4 HOH A 3 203 203 HOH HOH . G 4 HOH A 4 204 204 HOH HOH . G 4 HOH A 5 205 205 HOH HOH . G 4 HOH A 6 206 206 HOH HOH . G 4 HOH A 7 207 207 HOH HOH . G 4 HOH A 8 208 208 HOH HOH . G 4 HOH A 9 209 209 HOH HOH . G 4 HOH A 10 210 210 HOH HOH . G 4 HOH A 11 211 211 HOH HOH . G 4 HOH A 12 212 212 HOH HOH . G 4 HOH A 13 213 213 HOH HOH . G 4 HOH A 14 214 214 HOH HOH . G 4 HOH A 15 215 215 HOH HOH . G 4 HOH A 16 216 216 HOH HOH . G 4 HOH A 17 217 217 HOH HOH . G 4 HOH A 18 218 218 HOH HOH . G 4 HOH A 19 219 219 HOH HOH . G 4 HOH A 20 220 220 HOH HOH . G 4 HOH A 21 221 221 HOH HOH . G 4 HOH A 22 222 222 HOH HOH . G 4 HOH A 23 223 223 HOH HOH . G 4 HOH A 24 224 224 HOH HOH . G 4 HOH A 25 225 225 HOH HOH . G 4 HOH A 26 226 226 HOH HOH . G 4 HOH A 27 227 227 HOH HOH . G 4 HOH A 28 228 228 HOH HOH . G 4 HOH A 29 229 229 HOH HOH . G 4 HOH A 30 230 230 HOH HOH . G 4 HOH A 31 231 231 HOH HOH . G 4 HOH A 32 232 232 HOH HOH . G 4 HOH A 33 233 233 HOH HOH . G 4 HOH A 34 234 234 HOH HOH . G 4 HOH A 35 235 235 HOH HOH . G 4 HOH A 36 236 236 HOH HOH . G 4 HOH A 37 237 237 HOH HOH . G 4 HOH A 38 238 238 HOH HOH . G 4 HOH A 39 239 239 HOH HOH . G 4 HOH A 40 240 240 HOH HOH . G 4 HOH A 41 241 241 HOH HOH . G 4 HOH A 42 242 242 HOH HOH . G 4 HOH A 43 243 243 HOH HOH . G 4 HOH A 44 244 244 HOH HOH . G 4 HOH A 45 245 245 HOH HOH . G 4 HOH A 46 246 246 HOH HOH . G 4 HOH A 47 247 247 HOH HOH . G 4 HOH A 48 248 248 HOH HOH . G 4 HOH A 49 249 249 HOH HOH . G 4 HOH A 50 250 250 HOH HOH . G 4 HOH A 51 251 251 HOH HOH . G 4 HOH A 52 252 252 HOH HOH . G 4 HOH A 53 253 253 HOH HOH . G 4 HOH A 54 254 254 HOH HOH . G 4 HOH A 55 255 255 HOH HOH . G 4 HOH A 56 256 256 HOH HOH . G 4 HOH A 57 257 257 HOH HOH . G 4 HOH A 58 258 258 HOH HOH . G 4 HOH A 59 259 259 HOH HOH . G 4 HOH A 60 260 260 HOH HOH . G 4 HOH A 61 261 261 HOH HOH . G 4 HOH A 62 262 262 HOH HOH . G 4 HOH A 63 263 263 HOH HOH . G 4 HOH A 64 264 264 HOH HOH . G 4 HOH A 65 265 265 HOH HOH . G 4 HOH A 66 266 266 HOH HOH . G 4 HOH A 67 267 267 HOH HOH . G 4 HOH A 68 268 268 HOH HOH . G 4 HOH A 69 269 269 HOH HOH . G 4 HOH A 70 270 270 HOH HOH . G 4 HOH A 71 271 271 HOH HOH . G 4 HOH A 72 272 272 HOH HOH . G 4 HOH A 73 273 273 HOH HOH . G 4 HOH A 74 274 274 HOH HOH . G 4 HOH A 75 275 275 HOH HOH . G 4 HOH A 76 276 276 HOH HOH . G 4 HOH A 77 277 277 HOH HOH . G 4 HOH A 78 278 278 HOH HOH . G 4 HOH A 79 279 279 HOH HOH . G 4 HOH A 80 280 280 HOH HOH . G 4 HOH A 81 281 281 HOH HOH . G 4 HOH A 82 282 282 HOH HOH . G 4 HOH A 83 283 283 HOH HOH . G 4 HOH A 84 284 284 HOH HOH . G 4 HOH A 85 285 285 HOH HOH . G 4 HOH A 86 286 286 HOH HOH . G 4 HOH A 87 287 287 HOH HOH . G 4 HOH A 88 288 288 HOH HOH . G 4 HOH A 89 289 289 HOH HOH . G 4 HOH A 90 290 290 HOH HOH . G 4 HOH A 91 291 291 HOH HOH . G 4 HOH A 92 292 292 HOH HOH . G 4 HOH A 93 293 293 HOH HOH . G 4 HOH A 94 294 294 HOH HOH . G 4 HOH A 95 295 295 HOH HOH . G 4 HOH A 96 296 296 HOH HOH . G 4 HOH A 97 297 297 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol PT _atom_site.label_atom_id PT _atom_site.label_comp_id PT _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.978 _atom_site.Cartn_y 0.173 _atom_site.Cartn_z 18.425 _atom_site.occupancy 0.2 _atom_site.B_iso_or_equiv 31.75 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id PT _atom_site.auth_comp_id PT _atom_site.auth_seq_id 1002 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #