data_1SHZ # _model_server_result.job_id jNNA4DY0sboPU6Bk8BDqXw _model_server_result.datetime_utc '2024-11-22 13:31:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1shz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":377}' # _entry.id 1SHZ # _exptl.entry_id 1SHZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.91 _cell.angle_gamma 90 _cell.entry_id 1SHZ _cell.length_a 199.747 _cell.length_b 105.274 _cell.length_c 71.748 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SHZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,K,L 1 1 C,D,H,I,J,M,N 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 26 A SER 62 1_555 E MG MG . A MG 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc2 A OG1 THR 167 A THR 203 1_555 E MG MG . A MG 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? metalc ? metalc3 E MG MG . A MG 377 1_555 F F3 ALF . A ALF 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc4 E MG MG . A MG 377 1_555 G O2B GDP . A GDP 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc5 E MG MG . A MG 377 1_555 K O HOH . A HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.108 ? metalc ? metalc6 F AL ALF . A ALF 378 1_555 G O2B GDP . A GDP 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.581 ? metalc ? metalc7 F AL ALF . A ALF 378 1_555 G O3B GDP . A GDP 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc8 F AL ALF . A ALF 378 1_555 K O HOH . A HOH 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.866 ? metalc ? metalc9 C OG SER 26 D SER 62 1_555 H MG MG . D MG 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc10 C OG1 THR 167 D THR 203 1_555 H MG MG . D MG 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc11 H MG MG . D MG 377 1_555 I F3 ALF . D ALF 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc12 H MG MG . D MG 377 1_555 I AL ALF . D ALF 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.69 ? metalc ? metalc13 H MG MG . D MG 377 1_555 J O2B GDP . D GDP 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc14 H MG MG . D MG 377 1_555 M O HOH . D HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc15 I AL ALF . D ALF 378 1_555 J O3B GDP . D GDP 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc16 I AL ALF . D ALF 378 1_555 M O HOH . D HOH 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1SHZ _atom_sites.fract_transf_matrix[1][1] 0.005006 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000606 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009499 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MG A 1 377 376 MG MG . F 4 ALF A 1 378 377 ALF ALF . G 5 GDP A 1 475 375 GDP GDP . H 3 MG D 1 377 376 MG MG . I 4 ALF D 1 378 377 ALF ALF . J 5 GDP D 1 476 375 GDP GDP . K 6 HOH A 1 503 503 HOH HOH . K 6 HOH A 2 505 505 HOH HOH . K 6 HOH A 3 508 508 HOH HOH . K 6 HOH A 4 510 510 HOH HOH . K 6 HOH A 5 511 511 HOH HOH . K 6 HOH A 6 512 512 HOH HOH . K 6 HOH A 7 514 514 HOH HOH . K 6 HOH A 8 515 515 HOH HOH . K 6 HOH A 9 517 517 HOH HOH . K 6 HOH A 10 525 525 HOH HOH . K 6 HOH A 11 532 532 HOH HOH . K 6 HOH A 12 540 540 HOH HOH . K 6 HOH A 13 543 543 HOH HOH . K 6 HOH A 14 551 551 HOH HOH . K 6 HOH A 15 554 554 HOH HOH . K 6 HOH A 16 559 559 HOH HOH . K 6 HOH A 17 560 560 HOH HOH . K 6 HOH A 18 561 561 HOH HOH . K 6 HOH A 19 562 562 HOH HOH . K 6 HOH A 20 566 566 HOH HOH . K 6 HOH A 21 567 567 HOH HOH . K 6 HOH A 22 568 568 HOH HOH . K 6 HOH A 23 571 571 HOH HOH . K 6 HOH A 24 576 576 HOH HOH . K 6 HOH A 25 582 582 HOH HOH . L 6 HOH C 1 504 504 HOH HOH . L 6 HOH C 2 506 506 HOH HOH . L 6 HOH C 3 509 509 HOH HOH . L 6 HOH C 4 516 516 HOH HOH . L 6 HOH C 5 523 523 HOH HOH . L 6 HOH C 6 528 528 HOH HOH . L 6 HOH C 7 530 530 HOH HOH . L 6 HOH C 8 533 533 HOH HOH . L 6 HOH C 9 535 535 HOH HOH . L 6 HOH C 10 536 536 HOH HOH . L 6 HOH C 11 541 541 HOH HOH . L 6 HOH C 12 548 548 HOH HOH . L 6 HOH C 13 549 549 HOH HOH . L 6 HOH C 14 552 552 HOH HOH . L 6 HOH C 15 563 563 HOH HOH . L 6 HOH C 16 565 565 HOH HOH . L 6 HOH C 17 569 569 HOH HOH . L 6 HOH C 18 575 575 HOH HOH . L 6 HOH C 19 580 580 HOH HOH . L 6 HOH C 20 583 583 HOH HOH . M 6 HOH D 1 501 501 HOH HOH . M 6 HOH D 2 502 502 HOH HOH . M 6 HOH D 3 507 507 HOH HOH . M 6 HOH D 4 513 513 HOH HOH . M 6 HOH D 5 518 518 HOH HOH . M 6 HOH D 6 519 519 HOH HOH . M 6 HOH D 7 520 520 HOH HOH . M 6 HOH D 8 521 521 HOH HOH . M 6 HOH D 9 524 524 HOH HOH . M 6 HOH D 10 526 526 HOH HOH . M 6 HOH D 11 529 529 HOH HOH . M 6 HOH D 12 531 531 HOH HOH . M 6 HOH D 13 537 537 HOH HOH . M 6 HOH D 14 538 538 HOH HOH . M 6 HOH D 15 539 539 HOH HOH . M 6 HOH D 16 542 542 HOH HOH . M 6 HOH D 17 544 544 HOH HOH . M 6 HOH D 18 546 546 HOH HOH . M 6 HOH D 19 547 547 HOH HOH . M 6 HOH D 20 550 550 HOH HOH . M 6 HOH D 21 555 555 HOH HOH . M 6 HOH D 22 556 556 HOH HOH . M 6 HOH D 23 558 558 HOH HOH . M 6 HOH D 24 564 564 HOH HOH . M 6 HOH D 25 570 570 HOH HOH . M 6 HOH D 26 572 572 HOH HOH . M 6 HOH D 27 574 574 HOH HOH . M 6 HOH D 28 581 581 HOH HOH . M 6 HOH D 29 584 584 HOH HOH . N 6 HOH F 1 522 522 HOH HOH . N 6 HOH F 2 527 527 HOH HOH . N 6 HOH F 3 534 534 HOH HOH . N 6 HOH F 4 545 545 HOH HOH . N 6 HOH F 5 553 553 HOH HOH . N 6 HOH F 6 557 557 HOH HOH . N 6 HOH F 7 573 573 HOH HOH . N 6 HOH F 8 577 577 HOH HOH . N 6 HOH F 9 578 578 HOH HOH . N 6 HOH F 10 579 579 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 54.613 _atom_site.Cartn_y -13.404 _atom_site.Cartn_z -14.517 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.56 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 377 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #