data_1SIQ # _model_server_result.job_id QcyAQRJvjPD4O_M655Tsyw _model_server_result.datetime_utc '2024-11-28 14:20:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1siq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":399}' # _entry.id 1SIQ # _exptl.entry_id 1SIQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1SIQ _cell.length_a 116.96 _cell.length_b 116.96 _cell.length_c 128.02 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SIQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 -58.48 101.290331 0 3 'crystal symmetry operation' 9_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -42.673333 4 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -58.48 101.290331 -42.673333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 1SIQ _atom_sites.fract_transf_matrix[1][1] 0.00855 _atom_sites.fract_transf_matrix[1][2] 0.004936 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009873 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007811 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 399 399 FAD FAD . C 3 HOH A 1 401 401 HOH WAT . C 3 HOH A 2 402 402 HOH WAT . C 3 HOH A 3 403 403 HOH WAT . C 3 HOH A 4 404 404 HOH WAT . C 3 HOH A 5 405 405 HOH WAT . C 3 HOH A 6 406 406 HOH WAT . C 3 HOH A 7 407 407 HOH WAT . C 3 HOH A 8 408 408 HOH WAT . C 3 HOH A 9 409 409 HOH WAT . C 3 HOH A 10 410 410 HOH WAT . C 3 HOH A 11 411 411 HOH WAT . C 3 HOH A 12 412 412 HOH WAT . C 3 HOH A 13 413 413 HOH WAT . C 3 HOH A 14 414 414 HOH WAT . C 3 HOH A 15 415 415 HOH WAT . C 3 HOH A 16 416 416 HOH WAT . C 3 HOH A 17 417 417 HOH WAT . C 3 HOH A 18 418 418 HOH WAT . C 3 HOH A 19 419 419 HOH WAT . C 3 HOH A 20 420 420 HOH WAT . C 3 HOH A 21 421 421 HOH WAT . C 3 HOH A 22 422 422 HOH WAT . C 3 HOH A 23 423 423 HOH WAT . C 3 HOH A 24 424 424 HOH WAT . C 3 HOH A 25 425 425 HOH WAT . C 3 HOH A 26 426 426 HOH WAT . C 3 HOH A 27 427 427 HOH WAT . C 3 HOH A 28 428 428 HOH WAT . C 3 HOH A 29 429 429 HOH WAT . C 3 HOH A 30 430 430 HOH WAT . C 3 HOH A 31 431 431 HOH WAT . C 3 HOH A 32 432 432 HOH WAT . C 3 HOH A 33 433 433 HOH WAT . C 3 HOH A 34 434 434 HOH WAT . C 3 HOH A 35 435 435 HOH WAT . C 3 HOH A 36 436 436 HOH WAT . C 3 HOH A 37 437 437 HOH WAT . C 3 HOH A 38 438 438 HOH WAT . C 3 HOH A 39 439 439 HOH WAT . C 3 HOH A 40 440 440 HOH WAT . C 3 HOH A 41 441 441 HOH WAT . C 3 HOH A 42 442 442 HOH WAT . C 3 HOH A 43 443 443 HOH WAT . C 3 HOH A 44 444 444 HOH WAT . C 3 HOH A 45 445 445 HOH WAT . C 3 HOH A 46 446 446 HOH WAT . C 3 HOH A 47 447 447 HOH WAT . C 3 HOH A 48 448 448 HOH WAT . C 3 HOH A 49 449 449 HOH WAT . C 3 HOH A 50 450 450 HOH WAT . C 3 HOH A 51 451 451 HOH WAT . C 3 HOH A 52 452 452 HOH WAT . C 3 HOH A 53 453 453 HOH WAT . C 3 HOH A 54 454 454 HOH WAT . C 3 HOH A 55 455 455 HOH WAT . C 3 HOH A 56 456 456 HOH WAT . C 3 HOH A 57 457 457 HOH WAT . C 3 HOH A 58 458 458 HOH WAT . C 3 HOH A 59 459 459 HOH WAT . C 3 HOH A 60 460 460 HOH WAT . C 3 HOH A 61 461 461 HOH WAT . C 3 HOH A 62 462 462 HOH WAT . C 3 HOH A 63 463 463 HOH WAT . C 3 HOH A 64 464 464 HOH WAT . C 3 HOH A 65 465 465 HOH WAT . C 3 HOH A 66 466 466 HOH WAT . C 3 HOH A 67 467 467 HOH WAT . C 3 HOH A 68 468 468 HOH WAT . C 3 HOH A 69 469 469 HOH WAT . C 3 HOH A 70 470 470 HOH WAT . C 3 HOH A 71 471 471 HOH WAT . C 3 HOH A 72 472 472 HOH WAT . C 3 HOH A 73 473 473 HOH WAT . C 3 HOH A 74 474 474 HOH WAT . C 3 HOH A 75 475 475 HOH WAT . C 3 HOH A 76 476 476 HOH WAT . C 3 HOH A 77 477 477 HOH WAT . C 3 HOH A 78 478 478 HOH WAT . C 3 HOH A 79 479 479 HOH WAT . C 3 HOH A 80 480 480 HOH WAT . C 3 HOH A 81 481 481 HOH WAT . C 3 HOH A 82 482 482 HOH WAT . C 3 HOH A 83 483 483 HOH WAT . C 3 HOH A 84 484 484 HOH WAT . C 3 HOH A 85 485 485 HOH WAT . C 3 HOH A 86 486 486 HOH WAT . C 3 HOH A 87 487 487 HOH WAT . C 3 HOH A 88 488 488 HOH WAT . C 3 HOH A 89 489 489 HOH WAT . C 3 HOH A 90 490 490 HOH WAT . C 3 HOH A 91 491 491 HOH WAT . C 3 HOH A 92 492 492 HOH WAT . C 3 HOH A 93 493 493 HOH WAT . C 3 HOH A 94 494 494 HOH WAT . C 3 HOH A 95 495 495 HOH WAT . C 3 HOH A 96 496 496 HOH WAT . C 3 HOH A 97 497 497 HOH WAT . C 3 HOH A 98 498 498 HOH WAT . C 3 HOH A 99 499 499 HOH WAT . C 3 HOH A 100 500 500 HOH WAT . C 3 HOH A 101 501 501 HOH WAT . C 3 HOH A 102 502 502 HOH WAT . C 3 HOH A 103 503 503 HOH WAT . C 3 HOH A 104 504 504 HOH WAT . C 3 HOH A 105 505 505 HOH WAT . C 3 HOH A 106 506 506 HOH WAT . C 3 HOH A 107 507 507 HOH WAT . C 3 HOH A 108 508 508 HOH WAT . C 3 HOH A 109 509 509 HOH WAT . C 3 HOH A 110 510 510 HOH WAT . C 3 HOH A 111 511 511 HOH WAT . C 3 HOH A 112 512 512 HOH WAT . C 3 HOH A 113 513 513 HOH WAT . C 3 HOH A 114 514 514 HOH WAT . C 3 HOH A 115 515 515 HOH WAT . C 3 HOH A 116 516 516 HOH WAT . C 3 HOH A 117 517 517 HOH WAT . C 3 HOH A 118 518 518 HOH WAT . C 3 HOH A 119 519 519 HOH WAT . C 3 HOH A 120 520 520 HOH WAT . C 3 HOH A 121 521 521 HOH WAT . C 3 HOH A 122 522 522 HOH WAT . C 3 HOH A 123 523 523 HOH WAT . C 3 HOH A 124 524 524 HOH WAT . C 3 HOH A 125 525 525 HOH WAT . C 3 HOH A 126 526 526 HOH WAT . C 3 HOH A 127 527 527 HOH WAT . C 3 HOH A 128 528 528 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . B 2 -15.184 55.54 -39.705 1 14.98 ? PA FAD 399 A 1 HETATM 2 O O1A FAD . . . B 2 -15.99 54.345 -39.396 1 18.47 ? O1A FAD 399 A 1 HETATM 3 O O2A FAD . . . B 2 -14.961 55.803 -40.989 1 13.04 ? O2A FAD 399 A 1 HETATM 4 O O5B FAD . . . B 2 -16.195 56.523 -39.08 1 11.48 ? O5B FAD 399 A 1 HETATM 5 C C5B FAD . . . B 2 -16.574 56.499 -37.654 1 9.29 ? C5B FAD 399 A 1 HETATM 6 C C4B FAD . . . B 2 -18.023 55.956 -37.407 1 12.86 ? C4B FAD 399 A 1 HETATM 7 O O4B FAD . . . B 2 -18.687 55.516 -38.66 1 11.58 ? O4B FAD 399 A 1 HETATM 8 C C3B FAD . . . B 2 -18.055 54.744 -36.467 1 10.11 ? C3B FAD 399 A 1 HETATM 9 O O3B FAD . . . B 2 -18.872 54.864 -35.364 1 11.27 ? O3B FAD 399 A 1 HETATM 10 C C2B FAD . . . B 2 -18.368 53.61 -37.406 1 13.27 ? C2B FAD 399 A 1 HETATM 11 O O2B FAD . . . B 2 -18.877 52.477 -36.775 1 8.16 ? O2B FAD 399 A 1 HETATM 12 C C1B FAD . . . B 2 -19.394 54.26 -38.3 1 9.59 ? C1B FAD 399 A 1 HETATM 13 N N9A FAD . . . B 2 -19.616 53.574 -39.574 1 11.72 ? N9A FAD 399 A 1 HETATM 14 C C8A FAD . . . B 2 -18.7 53.412 -40.606 1 15.96 ? C8A FAD 399 A 1 HETATM 15 N N7A FAD . . . B 2 -19.197 52.733 -41.635 1 12.61 ? N7A FAD 399 A 1 HETATM 16 C C5A FAD . . . B 2 -20.486 52.433 -41.278 1 13.8 ? C5A FAD 399 A 1 HETATM 17 C C6A FAD . . . B 2 -21.547 51.696 -41.982 1 14.12 ? C6A FAD 399 A 1 HETATM 18 N N6A FAD . . . B 2 -21.401 51.157 -43.179 1 9.26 ? N6A FAD 399 A 1 HETATM 19 N N1A FAD . . . B 2 -22.747 51.594 -41.288 1 18.19 ? N1A FAD 399 A 1 HETATM 20 C C2A FAD . . . B 2 -22.932 52.137 -40.038 1 15.93 ? C2A FAD 399 A 1 HETATM 21 N N3A FAD . . . B 2 -22.007 52.825 -39.32 1 15.59 ? N3A FAD 399 A 1 HETATM 22 C C4A FAD . . . B 2 -20.798 52.947 -39.98 1 15.13 ? C4A FAD 399 A 1 HETATM 23 N N1 FAD . . . B 2 -4.855 51.592 -38.339 1 22.15 ? N1 FAD 399 A 1 HETATM 24 C C2 FAD . . . B 2 -3.882 50.864 -38.902 1 24.38 ? C2 FAD 399 A 1 HETATM 25 O O2 FAD . . . B 2 -3.968 50.453 -40.017 1 25.64 ? O2 FAD 399 A 1 HETATM 26 N N3 FAD . . . B 2 -2.674 50.543 -38.192 1 23.04 ? N3 FAD 399 A 1 HETATM 27 C C4 FAD . . . B 2 -2.449 50.975 -36.896 1 21.75 ? C4 FAD 399 A 1 HETATM 28 O O4 FAD . . . B 2 -1.411 50.684 -36.339 1 22.35 ? O4 FAD 399 A 1 HETATM 29 C C4X FAD . . . B 2 -3.492 51.782 -36.275 1 19.26 ? C4X FAD 399 A 1 HETATM 30 N N5 FAD . . . B 2 -3.328 52.268 -35.008 1 21.46 ? N5 FAD 399 A 1 HETATM 31 C C5X FAD . . . B 2 -4.34 53.059 -34.471 1 21.81 ? C5X FAD 399 A 1 HETATM 32 C C6 FAD . . . B 2 -4.164 53.611 -33.165 1 21.33 ? C6 FAD 399 A 1 HETATM 33 C C7 FAD . . . B 2 -5.134 54.429 -32.588 1 20.27 ? C7 FAD 399 A 1 HETATM 34 C C7M FAD . . . B 2 -4.912 55.013 -31.213 1 23.67 ? C7M FAD 399 A 1 HETATM 35 C C8 FAD . . . B 2 -6.368 54.729 -33.317 1 21.77 ? C8 FAD 399 A 1 HETATM 36 C C8M FAD . . . B 2 -7.463 55.61 -32.75 1 16.59 ? C8M FAD 399 A 1 HETATM 37 C C9 FAD . . . B 2 -6.544 54.189 -34.592 1 23.84 ? C9 FAD 399 A 1 HETATM 38 C C9A FAD . . . B 2 -5.542 53.365 -35.173 1 23.74 ? C9A FAD 399 A 1 HETATM 39 N N10 FAD . . . B 2 -5.664 52.812 -36.5 1 19.96 ? N10 FAD 399 A 1 HETATM 40 C C10 FAD . . . B 2 -4.705 52.062 -37.06 1 19.29 ? C10 FAD 399 A 1 HETATM 41 C C1' FAD . . . B 2 -6.875 53.149 -37.188 1 17.02 ? C1' FAD 399 A 1 HETATM 42 C C2' FAD . . . B 2 -8.086 52.158 -37.045 1 22.25 ? C2' FAD 399 A 1 HETATM 43 O O2' FAD . . . B 2 -7.759 50.938 -37.712 1 27.7 ? O2' FAD 399 A 1 HETATM 44 C C3' FAD . . . B 2 -9.026 52.964 -37.766 1 23.95 ? C3' FAD 399 A 1 HETATM 45 O O3' FAD . . . B 2 -9.229 54.149 -36.934 1 21.69 ? O3' FAD 399 A 1 HETATM 46 C C4' FAD . . . B 2 -10.428 52.502 -37.984 1 19.88 ? C4' FAD 399 A 1 HETATM 47 O O4' FAD . . . B 2 -10.435 51.281 -38.78 1 27.76 ? O4' FAD 399 A 1 HETATM 48 C C5' FAD . . . B 2 -10.742 53.74 -38.716 1 24.17 ? C5' FAD 399 A 1 HETATM 49 O O5' FAD . . . B 2 -12.131 53.997 -39.175 1 19.88 ? O5' FAD 399 A 1 HETATM 50 P P FAD . . . B 2 -12.473 55.465 -39.076 1 19.73 ? P FAD 399 A 1 HETATM 51 O O1P FAD . . . B 2 -11.667 55.988 -37.836 1 24.34 ? O1P FAD 399 A 1 HETATM 52 O O2P FAD . . . B 2 -12.248 56.175 -40.256 1 23.16 ? O2P FAD 399 A 1 HETATM 53 O O3P FAD . . . B 2 -13.902 55.425 -38.844 1 15.5 ? O3P FAD 399 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #