data_1SJ0 # _model_server_result.job_id MNbk6Eg4P98TnEk8bhJang _model_server_result.datetime_utc '2024-11-05 04:33:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1sj0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":600}' # _entry.id 1SJ0 # _exptl.entry_id 1SJ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 463.588 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S,3R)-2-(4-(2-(PIPERIDIN-1-YL)ETHOXY)PHENYL)-2,3-DIHYDRO-3-(4-HYDROXYPHENYL)BENZO[B][1,4]OXATHIIN-6-OL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1SJ0 _cell.length_a 58.48 _cell.length_b 58.48 _cell.length_c 276.08 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SJ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 29.24 50.645166 46.013333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H29 N O4 S' _chem_comp.formula_weight 463.588 _chem_comp.id E4D _chem_comp.mon_nstd_flag . _chem_comp.name (2S,3R)-2-(4-(2-(PIPERIDIN-1-YL)ETHOXY)PHENYL)-2,3-DIHYDRO-3-(4-HYDROXYPHENYL)BENZO[B][1,4]OXATHIIN-6-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'COMPOUND 4-D' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 E4D sing 83 n n C1 S11 E4D sing 84 n n C1 C12 E4D sing 85 n n C1 H1 E4D sing 86 n n C2 O3 E4D sing 87 n n C2 C19 E4D sing 88 n n C2 H2 E4D sing 89 n n O3 C4 E4D sing 90 n n C4 C5 E4D doub 91 n y C4 C10 E4D sing 92 n y C5 C6 E4D sing 93 n y C5 H5 E4D sing 94 n n C6 C7 E4D doub 95 n y C6 H6 E4D sing 96 n n C7 O8 E4D sing 97 n n C7 C9 E4D sing 98 n y O8 HO8 E4D sing 99 n n C9 C10 E4D doub 100 n y C9 H9 E4D sing 101 n n C10 S11 E4D sing 102 n n C12 C13 E4D doub 103 n y C12 C18 E4D sing 104 n y C13 C14 E4D sing 105 n y C13 H13 E4D sing 106 n n C14 C15 E4D doub 107 n y C14 H14 E4D sing 108 n n C15 O16 E4D sing 109 n n C15 C17 E4D sing 110 n y O16 H16 E4D sing 111 n n C17 C18 E4D doub 112 n y C17 H17 E4D sing 113 n n C18 H18 E4D sing 114 n n C19 C20 E4D doub 115 n y C19 C24 E4D sing 116 n y C20 C21 E4D sing 117 n y C20 H20 E4D sing 118 n n C21 C22 E4D doub 119 n y C21 H21 E4D sing 120 n n C22 C23 E4D sing 121 n y C22 O25 E4D sing 122 n n C23 C24 E4D doub 123 n y C23 H23 E4D sing 124 n n C24 H24 E4D sing 125 n n O25 C26 E4D sing 126 n n C26 C27 E4D sing 127 n n C26 H261 E4D sing 128 n n C26 H262 E4D sing 129 n n C27 N28 E4D sing 130 n n C27 H271 E4D sing 131 n n C27 H272 E4D sing 132 n n N28 C29 E4D sing 133 n n N28 C33 E4D sing 134 n n C29 C30 E4D sing 135 n n C29 H291 E4D sing 136 n n C29 H292 E4D sing 137 n n C30 C31 E4D sing 138 n n C30 H301 E4D sing 139 n n C30 H302 E4D sing 140 n n C31 C32 E4D sing 141 n n C31 H311 E4D sing 142 n n C31 H312 E4D sing 143 n n C32 C33 E4D sing 144 n n C32 H321 E4D sing 145 n n C32 H322 E4D sing 146 n n C33 H331 E4D sing 147 n n C33 H332 E4D sing 148 n n # _atom_sites.entry_id 1SJ0 _atom_sites.fract_transf_matrix[1][1] 0.0171 _atom_sites.fract_transf_matrix[1][2] 0.009873 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019745 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003622 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 E4D A 1 600 600 E4D INH . C 3 HOH A 1 1001 1001 HOH HOH . C 3 HOH A 2 1002 1002 HOH HOH . C 3 HOH A 3 1003 1003 HOH HOH . C 3 HOH A 4 1004 1004 HOH HOH . C 3 HOH A 5 1005 1005 HOH HOH . C 3 HOH A 6 1006 1006 HOH HOH . C 3 HOH A 7 1007 1007 HOH HOH . C 3 HOH A 8 1008 1008 HOH HOH . C 3 HOH A 9 1009 1009 HOH HOH . C 3 HOH A 10 1010 1010 HOH HOH . C 3 HOH A 11 1011 1011 HOH HOH . C 3 HOH A 12 1012 1012 HOH HOH . C 3 HOH A 13 1013 1013 HOH HOH . C 3 HOH A 14 1014 1014 HOH HOH . C 3 HOH A 15 1015 1015 HOH HOH . C 3 HOH A 16 1016 1016 HOH HOH . C 3 HOH A 17 1017 1017 HOH HOH . C 3 HOH A 18 1018 1018 HOH HOH . C 3 HOH A 19 1019 1019 HOH HOH . C 3 HOH A 20 1020 1020 HOH HOH . C 3 HOH A 21 1021 1021 HOH HOH . C 3 HOH A 22 1022 1022 HOH HOH . C 3 HOH A 23 1023 1023 HOH HOH . C 3 HOH A 24 1024 1024 HOH HOH . C 3 HOH A 25 1025 1025 HOH HOH . C 3 HOH A 26 1026 1026 HOH HOH . C 3 HOH A 27 1027 1027 HOH HOH . C 3 HOH A 28 1028 1028 HOH HOH . C 3 HOH A 29 1029 1029 HOH HOH . C 3 HOH A 30 1030 1030 HOH HOH . C 3 HOH A 31 1031 1031 HOH HOH . C 3 HOH A 32 1032 1032 HOH HOH . C 3 HOH A 33 1033 1033 HOH HOH . C 3 HOH A 34 1034 1034 HOH HOH . C 3 HOH A 35 1035 1035 HOH HOH . C 3 HOH A 36 1036 1036 HOH HOH . C 3 HOH A 37 1037 1037 HOH HOH . C 3 HOH A 38 1038 1038 HOH HOH . C 3 HOH A 39 1039 1039 HOH HOH . C 3 HOH A 40 1040 1040 HOH HOH . C 3 HOH A 41 1041 1041 HOH HOH . C 3 HOH A 42 1042 1042 HOH HOH . C 3 HOH A 43 1043 1043 HOH HOH . C 3 HOH A 44 1044 1044 HOH HOH . C 3 HOH A 45 1045 1045 HOH HOH . C 3 HOH A 46 1046 1046 HOH HOH . C 3 HOH A 47 1047 1047 HOH HOH . C 3 HOH A 48 1048 1048 HOH HOH . C 3 HOH A 49 1049 1049 HOH HOH . C 3 HOH A 50 1050 1050 HOH HOH . C 3 HOH A 51 1051 1051 HOH HOH . C 3 HOH A 52 1052 1052 HOH HOH . C 3 HOH A 53 1053 1053 HOH HOH . C 3 HOH A 54 1054 1054 HOH HOH . C 3 HOH A 55 1055 1055 HOH HOH . C 3 HOH A 56 1056 1056 HOH HOH . C 3 HOH A 57 1057 1057 HOH HOH . C 3 HOH A 58 1058 1058 HOH HOH . C 3 HOH A 59 1059 1059 HOH HOH . C 3 HOH A 60 1060 1060 HOH HOH . C 3 HOH A 61 1061 1061 HOH HOH . C 3 HOH A 62 1062 1062 HOH HOH . C 3 HOH A 63 1063 1063 HOH HOH . C 3 HOH A 64 1064 1064 HOH HOH . C 3 HOH A 65 1065 1065 HOH HOH . C 3 HOH A 66 1066 1066 HOH HOH . C 3 HOH A 67 1067 1067 HOH HOH . C 3 HOH A 68 1068 1068 HOH HOH . C 3 HOH A 69 1069 1069 HOH HOH . C 3 HOH A 70 1070 1070 HOH HOH . C 3 HOH A 71 1071 1071 HOH HOH . C 3 HOH A 72 1072 1072 HOH HOH . C 3 HOH A 73 1073 1073 HOH HOH . C 3 HOH A 74 1074 1074 HOH HOH . C 3 HOH A 75 1075 1075 HOH HOH . C 3 HOH A 76 1076 1076 HOH HOH . C 3 HOH A 77 1077 1077 HOH HOH . C 3 HOH A 78 1078 1078 HOH HOH . C 3 HOH A 79 1079 1079 HOH HOH . C 3 HOH A 80 1080 1080 HOH HOH . C 3 HOH A 81 1081 1081 HOH HOH . C 3 HOH A 82 1082 1082 HOH HOH . C 3 HOH A 83 1083 1083 HOH HOH . C 3 HOH A 84 1084 1084 HOH HOH . C 3 HOH A 85 1085 1085 HOH HOH . C 3 HOH A 86 1086 1086 HOH HOH . C 3 HOH A 87 1087 1087 HOH HOH . C 3 HOH A 88 1088 1088 HOH HOH . C 3 HOH A 89 1089 1089 HOH HOH . C 3 HOH A 90 1090 1090 HOH HOH . C 3 HOH A 91 1091 1091 HOH HOH . C 3 HOH A 92 1092 1092 HOH HOH . C 3 HOH A 93 1093 1093 HOH HOH . C 3 HOH A 94 1094 1094 HOH HOH . C 3 HOH A 95 1095 1095 HOH HOH . C 3 HOH A 96 1096 1096 HOH HOH . C 3 HOH A 97 1097 1097 HOH HOH . C 3 HOH A 98 1098 1098 HOH HOH . C 3 HOH A 99 1099 1099 HOH HOH . C 3 HOH A 100 1100 1100 HOH HOH . C 3 HOH A 101 1101 1101 HOH HOH . C 3 HOH A 102 1102 1102 HOH HOH . C 3 HOH A 103 1103 1103 HOH HOH . C 3 HOH A 104 1104 1104 HOH HOH . C 3 HOH A 105 1105 1105 HOH HOH . C 3 HOH A 106 1106 1106 HOH HOH . C 3 HOH A 107 1107 1107 HOH HOH . C 3 HOH A 108 1108 1108 HOH HOH . C 3 HOH A 109 1109 1109 HOH HOH . C 3 HOH A 110 1110 1110 HOH HOH . C 3 HOH A 111 1111 1111 HOH HOH . C 3 HOH A 112 1112 1112 HOH HOH . C 3 HOH A 113 1113 1113 HOH HOH . C 3 HOH A 114 1114 1114 HOH HOH . C 3 HOH A 115 1115 1115 HOH HOH . C 3 HOH A 116 1116 1116 HOH HOH . C 3 HOH A 117 1117 1117 HOH HOH . C 3 HOH A 118 1118 1118 HOH HOH . C 3 HOH A 119 1119 1119 HOH HOH . C 3 HOH A 120 1120 1120 HOH HOH . C 3 HOH A 121 1121 1121 HOH HOH . C 3 HOH A 122 1122 1122 HOH HOH . C 3 HOH A 123 1123 1123 HOH HOH . C 3 HOH A 124 1124 1124 HOH HOH . C 3 HOH A 125 1125 1125 HOH HOH . C 3 HOH A 126 1126 1126 HOH HOH . C 3 HOH A 127 1127 1127 HOH HOH . C 3 HOH A 128 1128 1128 HOH HOH . C 3 HOH A 129 1129 1129 HOH HOH . C 3 HOH A 130 1130 1130 HOH HOH . C 3 HOH A 131 1131 1131 HOH HOH . C 3 HOH A 132 1132 1132 HOH HOH . C 3 HOH A 133 1133 1133 HOH HOH . C 3 HOH A 134 1134 1134 HOH HOH . C 3 HOH A 135 1135 1135 HOH HOH . C 3 HOH A 136 1136 1136 HOH HOH . C 3 HOH A 137 1137 1137 HOH HOH . C 3 HOH A 138 1138 1138 HOH HOH . C 3 HOH A 139 1139 1139 HOH HOH . C 3 HOH A 140 1140 1140 HOH HOH . C 3 HOH A 141 1141 1141 HOH HOH . C 3 HOH A 142 1142 1142 HOH HOH . C 3 HOH A 143 1143 1143 HOH HOH . C 3 HOH A 144 1144 1144 HOH HOH . C 3 HOH A 145 1145 1145 HOH HOH . C 3 HOH A 146 1146 1146 HOH HOH . C 3 HOH A 147 1147 1147 HOH HOH . C 3 HOH A 148 1148 1148 HOH HOH . C 3 HOH A 149 1149 1149 HOH HOH . C 3 HOH A 150 1150 1150 HOH HOH . C 3 HOH A 151 1151 1151 HOH HOH . C 3 HOH A 152 1152 1152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 E4D . . . B 2 31.172 -0.238 28.707 1 32.1 ? C1 E4D 600 A 1 HETATM 2 C C2 E4D . . . B 2 31.276 -1.669 28.177 1 34.73 ? C2 E4D 600 A 1 HETATM 3 O O3 E4D . . . B 2 30.05 -2.369 28.431 1 27.07 ? O3 E4D 600 A 1 HETATM 4 C C4 E4D . . . B 2 28.861 -1.948 27.967 1 25.57 ? C4 E4D 600 A 1 HETATM 5 C C5 E4D . . . B 2 27.932 -2.901 27.58 1 31.13 ? C5 E4D 600 A 1 HETATM 6 C C6 E4D . . . B 2 26.724 -2.535 27.003 1 31.21 ? C6 E4D 600 A 1 HETATM 7 C C7 E4D . . . B 2 26.346 -1.183 27.031 1 28.79 ? C7 E4D 600 A 1 HETATM 8 O O8 E4D . . . B 2 25.128 -0.857 26.584 1 30.58 ? O8 E4D 600 A 1 HETATM 9 C C9 E4D . . . B 2 27.284 -0.215 27.426 1 28.86 ? C9 E4D 600 A 1 HETATM 10 C C10 E4D . . . B 2 28.555 -0.563 27.854 1 26.69 ? C10 E4D 600 A 1 HETATM 11 S S11 E4D . . . B 2 29.608 0.457 28.191 1 35.01 ? S11 E4D 600 A 1 HETATM 12 C C12 E4D . . . B 2 32.47 0.48 28.42 1 32.35 ? C12 E4D 600 A 1 HETATM 13 C C13 E4D . . . B 2 32.68 1.38 27.373 1 28.69 ? C13 E4D 600 A 1 HETATM 14 C C14 E4D . . . B 2 33.932 1.987 27.205 1 29.37 ? C14 E4D 600 A 1 HETATM 15 C C15 E4D . . . B 2 34.976 1.698 28.099 1 37.62 ? C15 E4D 600 A 1 HETATM 16 O O16 E4D . . . B 2 36.191 2.251 27.923 1 46.17 ? O16 E4D 600 A 1 HETATM 17 C C17 E4D . . . B 2 34.783 0.784 29.143 1 42.5 ? C17 E4D 600 A 1 HETATM 18 C C18 E4D . . . B 2 33.519 0.203 29.311 1 34.19 ? C18 E4D 600 A 1 HETATM 19 C C19 E4D . . . B 2 31.63 -1.84 26.702 1 29.57 ? C19 E4D 600 A 1 HETATM 20 C C20 E4D . . . B 2 32.648 -2.767 26.448 1 28.87 ? C20 E4D 600 A 1 HETATM 21 C C21 E4D . . . B 2 33.073 -3.05 25.148 1 32.16 ? C21 E4D 600 A 1 HETATM 22 C C22 E4D . . . B 2 32.496 -2.352 24.06 1 29.17 ? C22 E4D 600 A 1 HETATM 23 C C23 E4D . . . B 2 31.455 -1.471 24.295 1 27.18 ? C23 E4D 600 A 1 HETATM 24 C C24 E4D . . . B 2 31.047 -1.171 25.623 1 28.42 ? C24 E4D 600 A 1 HETATM 25 O O25 E4D . . . B 2 32.911 -2.572 22.785 1 32.5 ? O25 E4D 600 A 1 HETATM 26 C C26 E4D . . . B 2 34.002 -3.4 22.346 1 31.58 ? C26 E4D 600 A 1 HETATM 27 C C27 E4D . . . B 2 33.655 -4.384 21.206 1 37.58 ? C27 E4D 600 A 1 HETATM 28 N N28 E4D . . . B 2 32.8 -4.012 20.054 1 43.91 ? N28 E4D 600 A 1 HETATM 29 C C29 E4D . . . B 2 31.597 -3.241 20.319 1 36.37 ? C29 E4D 600 A 1 HETATM 30 C C30 E4D . . . B 2 30.557 -3.264 19.177 1 36.38 ? C30 E4D 600 A 1 HETATM 31 C C31 E4D . . . B 2 31.187 -2.912 17.813 1 30.2 ? C31 E4D 600 A 1 HETATM 32 C C32 E4D . . . B 2 32.413 -3.842 17.617 1 40.75 ? C32 E4D 600 A 1 HETATM 33 C C33 E4D . . . B 2 33.434 -3.674 18.776 1 35.27 ? C33 E4D 600 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 33 #