data_1SJ7 # _model_server_result.job_id 0bjFbbdmq8jOILBnwX0dow _model_server_result.datetime_utc '2024-11-24 06:33:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1sj7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":206}' # _entry.id 1SJ7 # _exptl.entry_id 1SJ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PLATINUM (II) ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1SJ7 _cell.length_a 95.662 _cell.length_b 95.662 _cell.length_c 115.215 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SJ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA dimeric 2 software_defined_assembly 4 PISA dimeric 2 software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,K 1 1 B,F,G,H,L 2 1 C,I,J,M 3 1 C,I,J,M 4 1,2 A,B,D,E,F,G,H,K,L 5 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_676 x-y+1,-y+2,-z+4/3 1 0 0 0 -1 0 0 0 -1 0 165.691444 153.62 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 K O HOH . A HOH 63 1_555 D PT PT . A PT 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.507 ? metalc ? metalc2 L O HOH . B HOH 59 1_555 H PT PT . B PT 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc3 F PT PT . B PT 203 1_555 B OG SER 149 B SER 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.297 ? metalc ? metalc4 G PT PT . B PT 204 1_555 B NE ARG 143 B ARG 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.445 ? metalc ? metalc5 G PT PT . B PT 204 1_555 B NH1 ARG 143 B ARG 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.503 ? metalc ? metalc6 G PT PT . B PT 204 1_555 B NH2 ARG 143 B ARG 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.347 ? metalc ? metalc7 H PT PT . B PT 205 1_555 B NZ LYS 59 B LYS 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.849 ? metalc ? metalc8 H PT PT . B PT 205 1_555 B OE2 GLU 120 B GLU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.589 ? metalc ? metalc9 J PT PT . C PT 207 1_555 C NZ LYS 59 C LYS 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.923 ? # _chem_comp.formula 'Pt 2' _chem_comp.formula_weight 195.078 _chem_comp.id PT _chem_comp.mon_nstd_flag . _chem_comp.name 'PLATINUM (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1SJ7 _atom_sites.fract_transf_matrix[1][1] 0.010453 _atom_sites.fract_transf_matrix[1][2] 0.006035 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012071 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008679 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PT A 1 201 1 PT PT . E 2 PT A 1 202 2 PT PT . F 2 PT B 1 203 3 PT PT . G 2 PT B 1 204 4 PT PT . H 2 PT B 1 205 5 PT PT . I 2 PT C 1 206 6 PT PT . J 2 PT C 1 207 7 PT PT . K 3 HOH A 1 1 1 HOH HOH . K 3 HOH A 2 2 2 HOH HOH . K 3 HOH A 3 8 8 HOH HOH . K 3 HOH A 4 12 12 HOH HOH . K 3 HOH A 5 13 13 HOH HOH . K 3 HOH A 6 14 14 HOH HOH . K 3 HOH A 7 18 18 HOH HOH . K 3 HOH A 8 19 19 HOH HOH . K 3 HOH A 9 21 21 HOH HOH . K 3 HOH A 10 23 23 HOH HOH . K 3 HOH A 11 25 25 HOH HOH . K 3 HOH A 12 31 31 HOH HOH . K 3 HOH A 13 35 35 HOH HOH . K 3 HOH A 14 40 40 HOH HOH . K 3 HOH A 15 43 43 HOH HOH . K 3 HOH A 16 54 54 HOH HOH . K 3 HOH A 17 55 55 HOH HOH . K 3 HOH A 18 58 58 HOH HOH . K 3 HOH A 19 62 62 HOH HOH . K 3 HOH A 20 63 63 HOH HOH . K 3 HOH A 21 64 64 HOH HOH . K 3 HOH A 22 65 65 HOH HOH . K 3 HOH A 23 69 69 HOH HOH . K 3 HOH A 24 71 71 HOH HOH . K 3 HOH A 25 74 74 HOH HOH . K 3 HOH A 26 84 84 HOH HOH . K 3 HOH A 27 85 85 HOH HOH . K 3 HOH A 28 90 90 HOH HOH . K 3 HOH A 29 91 91 HOH HOH . K 3 HOH A 30 99 99 HOH HOH . K 3 HOH A 31 100 100 HOH HOH . K 3 HOH A 32 103 103 HOH HOH . K 3 HOH A 33 105 105 HOH HOH . K 3 HOH A 34 106 106 HOH HOH . K 3 HOH A 35 107 107 HOH HOH . K 3 HOH A 36 108 108 HOH HOH . K 3 HOH A 37 109 109 HOH HOH . K 3 HOH A 38 111 111 HOH HOH . K 3 HOH A 39 112 112 HOH HOH . K 3 HOH A 40 115 115 HOH HOH . K 3 HOH A 41 116 116 HOH HOH . K 3 HOH A 42 119 119 HOH HOH . K 3 HOH A 43 122 122 HOH HOH . K 3 HOH A 44 123 123 HOH HOH . K 3 HOH A 45 130 130 HOH HOH . K 3 HOH A 46 135 135 HOH HOH . K 3 HOH A 47 137 137 HOH HOH . K 3 HOH A 48 138 138 HOH HOH . K 3 HOH A 49 141 141 HOH HOH . L 3 HOH B 1 3 3 HOH HOH . L 3 HOH B 2 4 4 HOH HOH . L 3 HOH B 3 6 6 HOH HOH . L 3 HOH B 4 7 7 HOH HOH . L 3 HOH B 5 15 15 HOH HOH . L 3 HOH B 6 17 17 HOH HOH . L 3 HOH B 7 20 20 HOH HOH . L 3 HOH B 8 24 24 HOH HOH . L 3 HOH B 9 26 26 HOH HOH . L 3 HOH B 10 27 27 HOH HOH . L 3 HOH B 11 29 29 HOH HOH . L 3 HOH B 12 36 36 HOH HOH . L 3 HOH B 13 37 37 HOH HOH . L 3 HOH B 14 39 39 HOH HOH . L 3 HOH B 15 45 45 HOH HOH . L 3 HOH B 16 48 48 HOH HOH . L 3 HOH B 17 49 49 HOH HOH . L 3 HOH B 18 52 52 HOH HOH . L 3 HOH B 19 59 59 HOH HOH . L 3 HOH B 20 60 60 HOH HOH . L 3 HOH B 21 66 66 HOH HOH . L 3 HOH B 22 67 67 HOH HOH . L 3 HOH B 23 73 73 HOH HOH . L 3 HOH B 24 77 77 HOH HOH . L 3 HOH B 25 80 80 HOH HOH . L 3 HOH B 26 83 83 HOH HOH . L 3 HOH B 27 86 86 HOH HOH . L 3 HOH B 28 87 87 HOH HOH . L 3 HOH B 29 92 92 HOH HOH . L 3 HOH B 30 93 93 HOH HOH . L 3 HOH B 31 94 94 HOH HOH . L 3 HOH B 32 95 95 HOH HOH . L 3 HOH B 33 96 96 HOH HOH . L 3 HOH B 34 104 104 HOH HOH . L 3 HOH B 35 113 113 HOH HOH . L 3 HOH B 36 114 114 HOH HOH . L 3 HOH B 37 118 118 HOH HOH . L 3 HOH B 38 120 120 HOH HOH . L 3 HOH B 39 121 121 HOH HOH . L 3 HOH B 40 124 124 HOH HOH . L 3 HOH B 41 139 139 HOH HOH . L 3 HOH B 42 142 142 HOH HOH . M 3 HOH C 1 5 5 HOH HOH . M 3 HOH C 2 9 9 HOH HOH . M 3 HOH C 3 10 10 HOH HOH . M 3 HOH C 4 11 11 HOH HOH . M 3 HOH C 5 16 16 HOH HOH . M 3 HOH C 6 22 22 HOH HOH . M 3 HOH C 7 28 28 HOH HOH . M 3 HOH C 8 30 30 HOH HOH . M 3 HOH C 9 32 32 HOH HOH . M 3 HOH C 10 33 33 HOH HOH . M 3 HOH C 11 34 34 HOH HOH . M 3 HOH C 12 41 41 HOH HOH . M 3 HOH C 13 42 42 HOH HOH . M 3 HOH C 14 44 44 HOH HOH . M 3 HOH C 15 47 47 HOH HOH . M 3 HOH C 16 50 50 HOH HOH . M 3 HOH C 17 51 51 HOH HOH . M 3 HOH C 18 53 53 HOH HOH . M 3 HOH C 19 56 56 HOH HOH . M 3 HOH C 20 57 57 HOH HOH . M 3 HOH C 21 61 61 HOH HOH . M 3 HOH C 22 68 68 HOH HOH . M 3 HOH C 23 70 70 HOH HOH . M 3 HOH C 24 72 72 HOH HOH . M 3 HOH C 25 76 76 HOH HOH . M 3 HOH C 26 79 79 HOH HOH . M 3 HOH C 27 82 82 HOH HOH . M 3 HOH C 28 88 88 HOH HOH . M 3 HOH C 29 98 98 HOH HOH . M 3 HOH C 30 101 101 HOH HOH . M 3 HOH C 31 102 102 HOH HOH . M 3 HOH C 32 110 110 HOH HOH . M 3 HOH C 33 117 117 HOH HOH . M 3 HOH C 34 127 127 HOH HOH . M 3 HOH C 35 128 128 HOH HOH . M 3 HOH C 36 131 131 HOH HOH . M 3 HOH C 37 132 132 HOH HOH . M 3 HOH C 38 133 133 HOH HOH . M 3 HOH C 39 136 136 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol PT _atom_site.label_atom_id PT _atom_site.label_comp_id PT _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x 21.468 _atom_site.Cartn_y 68.603 _atom_site.Cartn_z 64.239 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id PT _atom_site.auth_comp_id PT _atom_site.auth_seq_id 206 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #