data_1SMH
#
_model_server_result.job_id            cxdPJYx1-S0n6af8_JywiQ 
_model_server_result.datetime_utc      '2024-11-27 01:12:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1smh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":905}' 
#
_entry.id    1SMH 
#
_exptl.entry_id    1SMH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              90.121 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (R,R)-2,3-BUTANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1SMH 
_cell.length_a            48.78 
_cell.length_b            79.431 
_cell.length_c            117.82 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1SMH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C TRP 196 A TRP 196 1_555 A N TPO 197 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale2 A C TPO 197 A TPO 197 1_555 A N LEU 198 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale3 A C VAL 337 A VAL 337 1_555 A N SEP 338 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale4 A C SEP 338 A SEP 338 1_555 A N ILE 339 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
#
_chem_comp.formula           'C4 H10 O2' 
_chem_comp.formula_weight    90.121 
_chem_comp.id                BU3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (R,R)-2,3-BUTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O6 C3 BU3 sing 70 n n 
O6 HO6 BU3 sing 71 n n 
C3 C4 BU3 sing 72 n n 
C3 C2 BU3 sing 73 n n 
C3 H3 BU3 sing 74 n n 
C4 H41 BU3 sing 75 n n 
C4 H42 BU3 sing 76 n n 
C4 H43 BU3 sing 77 n n 
C2 O5 BU3 sing 78 n n 
C2 C1 BU3 sing 79 n n 
C2 H2 BU3 sing 80 n n 
O5 HO5 BU3 sing 81 n n 
C1 H11 BU3 sing 82 n n 
C1 H12 BU3 sing 83 n n 
C1 H13 BU3 sing 84 n n 
#
_atom_sites.entry_id                     1SMH 
_atom_sites.fract_transf_matrix[1][1]    0.0205 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01259 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008488 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 BU3 A 1 901 901 BU3 BU3 . 
D 3 BU3 A 1 903 903 BU3 BU3 . 
E 3 BU3 A 1 904 904 BU3 BU3 . 
F 3 BU3 A 1 905 905 BU3 BU3 . 
G 3 BU3 A 1 906 906 BU3 BU3 . 
H 4 MG8 A 1 1000 1000 MG8 MG8 . 
I 3 BU3 B 1 902 902 BU3 BU3 . 
J 5 HOH A 1 1001 2 HOH HOH . 
J 5 HOH A 2 1002 4 HOH HOH . 
J 5 HOH A 3 1003 5 HOH HOH . 
J 5 HOH A 4 1004 6 HOH HOH . 
J 5 HOH A 5 1005 8 HOH HOH . 
J 5 HOH A 6 1006 9 HOH HOH . 
J 5 HOH A 7 1007 11 HOH HOH . 
J 5 HOH A 8 1008 13 HOH HOH . 
J 5 HOH A 9 1009 15 HOH HOH . 
J 5 HOH A 10 1010 16 HOH HOH . 
J 5 HOH A 11 1011 18 HOH HOH . 
J 5 HOH A 12 1012 20 HOH HOH . 
J 5 HOH A 13 1013 22 HOH HOH . 
J 5 HOH A 14 1014 25 HOH HOH . 
J 5 HOH A 15 1015 32 HOH HOH . 
J 5 HOH A 16 1016 34 HOH HOH . 
J 5 HOH A 17 1017 36 HOH HOH . 
J 5 HOH A 18 1018 37 HOH HOH . 
J 5 HOH A 19 1019 39 HOH HOH . 
J 5 HOH A 20 1020 43 HOH HOH . 
J 5 HOH A 21 1021 45 HOH HOH . 
J 5 HOH A 22 1022 48 HOH HOH . 
J 5 HOH A 23 1023 50 HOH HOH . 
J 5 HOH A 24 1024 52 HOH HOH . 
J 5 HOH A 25 1025 53 HOH HOH . 
J 5 HOH A 26 1026 54 HOH HOH . 
J 5 HOH A 27 1027 55 HOH HOH . 
J 5 HOH A 28 1028 57 HOH HOH . 
J 5 HOH A 29 1029 59 HOH HOH . 
J 5 HOH A 30 1030 105 HOH HOH . 
J 5 HOH A 31 1031 106 HOH HOH . 
J 5 HOH A 32 1032 108 HOH HOH . 
J 5 HOH A 33 1033 109 HOH HOH . 
J 5 HOH A 34 1034 119 HOH HOH . 
J 5 HOH A 35 1035 127 HOH HOH . 
J 5 HOH A 36 1036 134 HOH HOH . 
J 5 HOH A 37 1037 136 HOH HOH . 
J 5 HOH A 38 1038 162 HOH HOH . 
J 5 HOH A 39 1039 281 HOH HOH . 
J 5 HOH A 40 1040 225 HOH HOH . 
J 5 HOH A 41 1041 232 HOH HOH . 
J 5 HOH A 42 1042 239 HOH HOH . 
J 5 HOH A 43 1043 241 HOH HOH . 
J 5 HOH A 44 1044 242 HOH HOH . 
J 5 HOH A 45 1045 259 HOH HOH . 
J 5 HOH A 46 1046 265 HOH HOH . 
J 5 HOH A 47 1047 266 HOH HOH . 
J 5 HOH A 48 1048 294 HOH HOH . 
J 5 HOH A 49 1049 216 HOH HOH . 
J 5 HOH A 50 1050 219 HOH HOH . 
J 5 HOH A 51 1051 233 HOH HOH . 
J 5 HOH A 52 1052 439 HOH HOH . 
J 5 HOH A 53 1053 445 HOH HOH . 
J 5 HOH A 54 1054 449 HOH HOH . 
J 5 HOH A 55 1055 450 HOH HOH . 
J 5 HOH A 56 1056 515 HOH HOH . 
J 5 HOH A 57 1057 522 HOH HOH . 
J 5 HOH A 58 1058 523 HOH HOH . 
J 5 HOH A 59 1059 528 HOH HOH . 
J 5 HOH A 60 1060 529 HOH HOH . 
J 5 HOH A 61 1061 536 HOH HOH . 
J 5 HOH A 62 1062 545 HOH HOH . 
J 5 HOH A 63 1063 550 HOH HOH . 
J 5 HOH A 64 1064 556 HOH HOH . 
J 5 HOH A 65 1065 566 HOH HOH . 
J 5 HOH A 66 1066 577 HOH HOH . 
J 5 HOH A 67 1067 600 HOH HOH . 
J 5 HOH A 68 1068 588 HOH HOH . 
J 5 HOH A 69 1069 579 HOH HOH . 
J 5 HOH A 70 1070 617 HOH HOH . 
J 5 HOH A 71 1071 636 HOH HOH . 
J 5 HOH A 72 1072 639 HOH HOH . 
J 5 HOH A 73 1073 643 HOH HOH . 
J 5 HOH A 74 1074 647 HOH HOH . 
J 5 HOH A 75 1075 661 HOH HOH . 
J 5 HOH A 76 1076 662 HOH HOH . 
J 5 HOH A 77 1077 710 HOH HOH . 
J 5 HOH A 78 1078 711 HOH HOH . 
J 5 HOH A 79 1079 712 HOH HOH . 
J 5 HOH A 80 1080 713 HOH HOH . 
J 5 HOH A 81 1081 715 HOH HOH . 
J 5 HOH A 82 1082 718 HOH HOH . 
J 5 HOH A 83 1083 719 HOH HOH . 
J 5 HOH A 84 1084 720 HOH HOH . 
J 5 HOH A 85 1085 721 HOH HOH . 
J 5 HOH A 86 1086 723 HOH HOH . 
J 5 HOH A 87 1087 724 HOH HOH . 
J 5 HOH A 88 1088 725 HOH HOH . 
J 5 HOH A 89 1089 726 HOH HOH . 
J 5 HOH A 90 1090 727 HOH HOH . 
J 5 HOH A 91 1091 729 HOH HOH . 
J 5 HOH A 92 1092 731 HOH HOH . 
J 5 HOH A 93 1093 732 HOH HOH . 
J 5 HOH A 94 1094 733 HOH HOH . 
J 5 HOH A 95 1095 734 HOH HOH . 
J 5 HOH A 96 1096 735 HOH HOH . 
J 5 HOH A 97 1097 737 HOH HOH . 
J 5 HOH A 98 1098 736 HOH HOH . 
J 5 HOH A 99 1099 739 HOH HOH . 
J 5 HOH A 100 1100 740 HOH HOH . 
J 5 HOH A 101 1101 741 HOH HOH . 
J 5 HOH A 102 1102 742 HOH HOH . 
J 5 HOH A 103 1103 743 HOH HOH . 
J 5 HOH A 104 1104 745 HOH HOH . 
J 5 HOH A 105 1105 746 HOH HOH . 
J 5 HOH A 106 1106 750 HOH HOH . 
J 5 HOH A 107 1107 751 HOH HOH . 
J 5 HOH A 108 1108 752 HOH HOH . 
J 5 HOH A 109 1109 753 HOH HOH . 
J 5 HOH A 110 1110 754 HOH HOH . 
J 5 HOH A 111 1111 757 HOH HOH . 
J 5 HOH A 112 1112 758 HOH HOH . 
J 5 HOH A 113 1113 760 HOH HOH . 
J 5 HOH A 114 1114 761 HOH HOH . 
J 5 HOH A 115 1115 762 HOH HOH . 
J 5 HOH A 116 1116 763 HOH HOH . 
J 5 HOH A 117 1117 764 HOH HOH . 
J 5 HOH A 118 1118 765 HOH HOH . 
J 5 HOH A 119 1119 767 HOH HOH . 
J 5 HOH A 120 1120 768 HOH HOH . 
J 5 HOH A 121 1121 769 HOH HOH . 
J 5 HOH A 122 1122 770 HOH HOH . 
J 5 HOH A 123 1123 772 HOH HOH . 
J 5 HOH A 124 1124 774 HOH HOH . 
J 5 HOH A 125 1125 775 HOH HOH . 
J 5 HOH A 126 1126 777 HOH HOH . 
J 5 HOH A 127 1127 782 HOH HOH . 
J 5 HOH A 128 1128 784 HOH HOH . 
J 5 HOH A 129 1129 786 HOH HOH . 
J 5 HOH A 130 1130 789 HOH HOH . 
J 5 HOH A 131 1131 790 HOH HOH . 
J 5 HOH A 132 1132 792 HOH HOH . 
J 5 HOH A 133 1133 793 HOH HOH . 
J 5 HOH A 134 1134 795 HOH HOH . 
J 5 HOH A 135 1135 796 HOH HOH . 
J 5 HOH A 136 1136 797 HOH HOH . 
J 5 HOH A 137 1137 798 HOH HOH . 
J 5 HOH A 138 1138 799 HOH HOH . 
J 5 HOH A 139 1139 804 HOH HOH . 
J 5 HOH A 140 1140 807 HOH HOH . 
J 5 HOH A 141 1141 809 HOH HOH . 
J 5 HOH A 142 1142 810 HOH HOH . 
J 5 HOH A 143 1143 813 HOH HOH . 
J 5 HOH A 144 1144 816 HOH HOH . 
J 5 HOH A 145 1145 817 HOH HOH . 
J 5 HOH A 146 1146 819 HOH HOH . 
J 5 HOH A 147 1147 821 HOH HOH . 
J 5 HOH A 148 1148 848 HOH HOH . 
J 5 HOH A 149 1149 852 HOH HOH . 
J 5 HOH A 150 1150 853 HOH HOH . 
J 5 HOH A 151 1151 855 HOH HOH . 
J 5 HOH A 152 1152 857 HOH HOH . 
K 5 HOH B 1 903 1 HOH HOH . 
K 5 HOH B 2 904 14 HOH HOH . 
K 5 HOH B 3 905 19 HOH HOH . 
K 5 HOH B 4 906 21 HOH HOH . 
K 5 HOH B 5 907 101 HOH HOH . 
K 5 HOH B 6 908 116 HOH HOH . 
K 5 HOH B 7 909 120 HOH HOH . 
K 5 HOH B 8 910 149 HOH HOH . 
K 5 HOH B 9 911 300 HOH HOH . 
K 5 HOH B 10 912 507 HOH HOH . 
K 5 HOH B 11 913 526 HOH HOH . 
K 5 HOH B 12 914 582 HOH HOH . 
K 5 HOH B 13 915 595 HOH HOH . 
K 5 HOH B 14 916 578 HOH HOH . 
K 5 HOH B 15 917 655 HOH HOH . 
K 5 HOH B 16 918 658 HOH HOH . 
K 5 HOH B 17 919 722 HOH HOH . 
K 5 HOH B 18 920 730 HOH HOH . 
K 5 HOH B 19 921 773 HOH HOH . 
K 5 HOH B 20 922 805 HOH HOH . 
K 5 HOH B 21 923 806 HOH HOH . 
K 5 HOH B 22 924 844 HOH HOH . 
K 5 HOH B 23 925 846 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O6 BU3 . . . F 3 -8.969 30.483 23.984 1 58.62 ? O6 BU3 905 A 1 
HETATM 2 C C3 BU3 . . . F 3 -10.193 29.752 23.901 1 57.26 ? C3 BU3 905 A 1 
HETATM 3 C C4 BU3 . . . F 3 -10.848 29.708 25.287 1 58.09 ? C4 BU3 905 A 1 
HETATM 4 C C2 BU3 . . . F 3 -9.859 28.379 23.285 1 56.37 ? C2 BU3 905 A 1 
HETATM 5 O O5 BU3 . . . F 3 -9.503 28.6 21.92 1 54.82 ? O5 BU3 905 A 1 
HETATM 6 C C1 BU3 . . . F 3 -10.996 27.347 23.379 1 56.11 ? C1 BU3 905 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           6 
#