data_1SMJ
#
_model_server_result.job_id            5PKsEPSy7PE1Y-WyZX18dA 
_model_server_result.datetime_utc      '2024-11-06 09:24:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1smj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":2465}' 
#
_entry.id    1SMJ 
#
_exptl.entry_id    1SMJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              254.408 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PALMITOLEIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1SMJ 
_cell.length_a            107.312 
_cell.length_b            166.886 
_cell.length_c            224.937 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1SMJ 
_symmetry.cell_setting             orthorhombic 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F 1 1 
B,G,H 2 1 
C,I,J 3 1 
D,K,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OE2 GLU 264 A GLU 264 1_555 E NC HEM . A HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.514 ? 
metalc ? metalc1 A OE2 GLU 264 A GLU 264 1_555 E FE HEM . A HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.754 ? 
metalc ? metalc2 A SG CYS 400 A CYS 400 1_555 E FE HEM . A HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc3 B OE2 GLU 264 B GLU 264 1_555 G FE HEM . B HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc4 B SG CYS 400 B CYS 400 1_555 G FE HEM . B HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc5 C OE2 GLU 264 C GLU 264 1_555 I FE HEM . C HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
metalc ? metalc6 C SG CYS 400 C CYS 400 1_555 I FE HEM . C HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? 
metalc ? metalc7 D OE2 GLU 264 D GLU 264 1_555 K FE HEM . D HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc8 D SG CYS 400 D CYS 400 1_555 K FE HEM . D HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? 
#
_chem_comp.formula           'C16 H30 O2' 
_chem_comp.formula_weight    254.408 
_chem_comp.id                PAM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PALMITOLEIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PAM sing 317 n n 
C1 O2 PAM doub 318 n n 
C1 C2 PAM sing 319 n n 
O1 HO1 PAM sing 320 n n 
C2 C3 PAM sing 321 n n 
C2 H21 PAM sing 322 n n 
C2 H22 PAM sing 323 n n 
C3 C4 PAM sing 324 n n 
C3 H31 PAM sing 325 n n 
C3 H32 PAM sing 326 n n 
C4 C5 PAM sing 327 n n 
C4 H41 PAM sing 328 n n 
C4 H42 PAM sing 329 n n 
C5 C6 PAM sing 330 n n 
C5 H51 PAM sing 331 n n 
C5 H52 PAM sing 332 n n 
C6 C7 PAM sing 333 n n 
C6 H61 PAM sing 334 n n 
C6 H62 PAM sing 335 n n 
C7 C8 PAM sing 336 n n 
C7 H71 PAM sing 337 n n 
C7 H72 PAM sing 338 n n 
C8 C9 PAM sing 339 n n 
C8 H81 PAM sing 340 n n 
C8 H82 PAM sing 341 n n 
C9 C10 PAM doub 342 z n 
C9 H9 PAM sing 343 n n 
C10 C11 PAM sing 344 n n 
C10 H10 PAM sing 345 n n 
C11 C12 PAM sing 346 n n 
C11 H111 PAM sing 347 n n 
C11 H112 PAM sing 348 n n 
C12 C13 PAM sing 349 n n 
C12 H121 PAM sing 350 n n 
C12 H122 PAM sing 351 n n 
C13 C14 PAM sing 352 n n 
C13 H131 PAM sing 353 n n 
C13 H132 PAM sing 354 n n 
C14 C15 PAM sing 355 n n 
C14 H141 PAM sing 356 n n 
C14 H142 PAM sing 357 n n 
C15 C16 PAM sing 358 n n 
C15 H151 PAM sing 359 n n 
C15 H152 PAM sing 360 n n 
C16 H161 PAM sing 361 n n 
C16 H162 PAM sing 362 n n 
C16 H163 PAM sing 363 n n 
#
_atom_sites.entry_id                     1SMJ 
_atom_sites.fract_transf_matrix[1][1]    0.009319 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005992 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004446 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HEM A 1 472 460 HEM HEM . 
F 3 PAM A 1 1465 1465 PAM PAM . 
G 2 HEM B 1 472 460 HEM HEM . 
H 3 PAM B 1 2465 2465 PAM PAM . 
I 2 HEM C 1 472 460 HEM HEM . 
J 3 PAM C 1 3465 3465 PAM PAM . 
K 2 HEM D 1 472 460 HEM HEM . 
L 3 PAM D 1 4465 4465 PAM PAM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PAM . . . H 3 89.32 132.354 167.46 1 72.78 ? C1 PAM 2465 B 1 
HETATM 2 O O1 PAM . . . H 3 88.277 131.749 167.904 1 76.93 ? O1 PAM 2465 B 1 
HETATM 3 O O2 PAM . . . H 3 89.689 133.43 168.075 1 57.66 ? O2 PAM 2465 B 1 
HETATM 4 C C2 PAM . . . H 3 90.091 131.862 166.213 1 74.36 ? C2 PAM 2465 B 1 
HETATM 5 C C3 PAM . . . H 3 89.224 130.823 165.44 1 74.91 ? C3 PAM 2465 B 1 
HETATM 6 C C4 PAM . . . H 3 88.549 131.255 164.113 1 73.58 ? C4 PAM 2465 B 1 
HETATM 7 C C5 PAM . . . H 3 89.162 130.437 162.973 1 74.08 ? C5 PAM 2465 B 1 
HETATM 8 C C6 PAM . . . H 3 88.107 129.744 162.104 1 71.64 ? C6 PAM 2465 B 1 
HETATM 9 C C7 PAM . . . H 3 88.63 129.639 160.665 1 69.76 ? C7 PAM 2465 B 1 
HETATM 10 C C8 PAM . . . H 3 87.52 130.108 159.753 1 66.54 ? C8 PAM 2465 B 1 
HETATM 11 C C9 PAM . . . H 3 87.583 129.326 158.465 1 68.52 ? C9 PAM 2465 B 1 
HETATM 12 C C10 PAM . . . H 3 88.676 129.868 157.529 1 68.67 ? C10 PAM 2465 B 1 
HETATM 13 C C11 PAM . . . H 3 88.474 131.342 157.172 1 63.57 ? C11 PAM 2465 B 1 
HETATM 14 C C12 PAM . . . H 3 88.73 131.525 155.688 1 61.9 ? C12 PAM 2465 B 1 
HETATM 15 C C13 PAM . . . H 3 87.609 132.363 155.077 1 59.57 ? C13 PAM 2465 B 1 
HETATM 16 C C14 PAM . . . H 3 87.143 131.701 153.796 1 61.95 ? C14 PAM 2465 B 1 
HETATM 17 C C15 PAM . . . H 3 86.694 132.747 152.773 1 64.18 ? C15 PAM 2465 B 1 
HETATM 18 C C16 PAM . . . H 3 85.227 133.123 152.952 1 59.05 ? C16 PAM 2465 B 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           18 
#