data_1SMJ # _model_server_result.job_id o2SgMYwbEJ3gBlwBNXtCTg _model_server_result.datetime_utc '2024-11-24 10:48:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1smj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2465}' # _entry.id 1SMJ # _exptl.entry_id 1SMJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 254.408 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITOLEIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1SMJ _cell.length_a 107.312 _cell.length_b 166.886 _cell.length_c 224.937 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SMJ _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F 1 1 B,G,H 2 1 C,I,J 3 1 D,K,L 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OE2 GLU 264 A GLU 264 1_555 E NC HEM . A HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.514 ? metalc ? metalc1 A OE2 GLU 264 A GLU 264 1_555 E FE HEM . A HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.754 ? metalc ? metalc2 A SG CYS 400 A CYS 400 1_555 E FE HEM . A HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc3 B OE2 GLU 264 B GLU 264 1_555 G FE HEM . B HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc4 B SG CYS 400 B CYS 400 1_555 G FE HEM . B HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc5 C OE2 GLU 264 C GLU 264 1_555 I FE HEM . C HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc6 C SG CYS 400 C CYS 400 1_555 I FE HEM . C HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? metalc ? metalc7 D OE2 GLU 264 D GLU 264 1_555 K FE HEM . D HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc8 D SG CYS 400 D CYS 400 1_555 K FE HEM . D HEM 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? # _chem_comp.formula 'C16 H30 O2' _chem_comp.formula_weight 254.408 _chem_comp.id PAM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITOLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PAM sing 317 n n C1 O2 PAM doub 318 n n C1 C2 PAM sing 319 n n O1 HO1 PAM sing 320 n n C2 C3 PAM sing 321 n n C2 H21 PAM sing 322 n n C2 H22 PAM sing 323 n n C3 C4 PAM sing 324 n n C3 H31 PAM sing 325 n n C3 H32 PAM sing 326 n n C4 C5 PAM sing 327 n n C4 H41 PAM sing 328 n n C4 H42 PAM sing 329 n n C5 C6 PAM sing 330 n n C5 H51 PAM sing 331 n n C5 H52 PAM sing 332 n n C6 C7 PAM sing 333 n n C6 H61 PAM sing 334 n n C6 H62 PAM sing 335 n n C7 C8 PAM sing 336 n n C7 H71 PAM sing 337 n n C7 H72 PAM sing 338 n n C8 C9 PAM sing 339 n n C8 H81 PAM sing 340 n n C8 H82 PAM sing 341 n n C9 C10 PAM doub 342 z n C9 H9 PAM sing 343 n n C10 C11 PAM sing 344 n n C10 H10 PAM sing 345 n n C11 C12 PAM sing 346 n n C11 H111 PAM sing 347 n n C11 H112 PAM sing 348 n n C12 C13 PAM sing 349 n n C12 H121 PAM sing 350 n n C12 H122 PAM sing 351 n n C13 C14 PAM sing 352 n n C13 H131 PAM sing 353 n n C13 H132 PAM sing 354 n n C14 C15 PAM sing 355 n n C14 H141 PAM sing 356 n n C14 H142 PAM sing 357 n n C15 C16 PAM sing 358 n n C15 H151 PAM sing 359 n n C15 H152 PAM sing 360 n n C16 H161 PAM sing 361 n n C16 H162 PAM sing 362 n n C16 H163 PAM sing 363 n n # _atom_sites.entry_id 1SMJ _atom_sites.fract_transf_matrix[1][1] 0.009319 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005992 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004446 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HEM A 1 472 460 HEM HEM . F 3 PAM A 1 1465 1465 PAM PAM . G 2 HEM B 1 472 460 HEM HEM . H 3 PAM B 1 2465 2465 PAM PAM . I 2 HEM C 1 472 460 HEM HEM . J 3 PAM C 1 3465 3465 PAM PAM . K 2 HEM D 1 472 460 HEM HEM . L 3 PAM D 1 4465 4465 PAM PAM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PAM . . . H 3 89.32 132.354 167.46 1 72.78 ? C1 PAM 2465 B 1 HETATM 2 O O1 PAM . . . H 3 88.277 131.749 167.904 1 76.93 ? O1 PAM 2465 B 1 HETATM 3 O O2 PAM . . . H 3 89.689 133.43 168.075 1 57.66 ? O2 PAM 2465 B 1 HETATM 4 C C2 PAM . . . H 3 90.091 131.862 166.213 1 74.36 ? C2 PAM 2465 B 1 HETATM 5 C C3 PAM . . . H 3 89.224 130.823 165.44 1 74.91 ? C3 PAM 2465 B 1 HETATM 6 C C4 PAM . . . H 3 88.549 131.255 164.113 1 73.58 ? C4 PAM 2465 B 1 HETATM 7 C C5 PAM . . . H 3 89.162 130.437 162.973 1 74.08 ? C5 PAM 2465 B 1 HETATM 8 C C6 PAM . . . H 3 88.107 129.744 162.104 1 71.64 ? C6 PAM 2465 B 1 HETATM 9 C C7 PAM . . . H 3 88.63 129.639 160.665 1 69.76 ? C7 PAM 2465 B 1 HETATM 10 C C8 PAM . . . H 3 87.52 130.108 159.753 1 66.54 ? C8 PAM 2465 B 1 HETATM 11 C C9 PAM . . . H 3 87.583 129.326 158.465 1 68.52 ? C9 PAM 2465 B 1 HETATM 12 C C10 PAM . . . H 3 88.676 129.868 157.529 1 68.67 ? C10 PAM 2465 B 1 HETATM 13 C C11 PAM . . . H 3 88.474 131.342 157.172 1 63.57 ? C11 PAM 2465 B 1 HETATM 14 C C12 PAM . . . H 3 88.73 131.525 155.688 1 61.9 ? C12 PAM 2465 B 1 HETATM 15 C C13 PAM . . . H 3 87.609 132.363 155.077 1 59.57 ? C13 PAM 2465 B 1 HETATM 16 C C14 PAM . . . H 3 87.143 131.701 153.796 1 61.95 ? C14 PAM 2465 B 1 HETATM 17 C C15 PAM . . . H 3 86.694 132.747 152.773 1 64.18 ? C15 PAM 2465 B 1 HETATM 18 C C16 PAM . . . H 3 85.227 133.123 152.952 1 59.05 ? C16 PAM 2465 B 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #