data_1SOI # _model_server_result.job_id GVigjcwlGAqsSfMfzJZz4Q _model_server_result.datetime_utc '2025-03-06 03:58:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1soi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 1SOI # _exptl.entry_id 1SOI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.36 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SAMARIUM (III) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1SOI _cell.length_a 53.171 _cell.length_b 53.171 _cell.length_c 121.972 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SOI _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 60.986 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 12 A GLU 12 1_555 D SM SM . A SM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? metalc ? metalc2 A OE1 GLU 65 A GLU 65 1_555 B SM SM . A SM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc3 A OE2 GLU 65 A GLU 65 1_555 B SM SM . A SM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc4 A OE1 GLU 68 A GLU 68 1_555 B SM SM . A SM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc5 A O GLY 90 A GLY 90 1_555 D SM SM . A SM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.887 ? metalc ? metalc6 A OD1 ASP 147 A ASP 147 1_555 C SM SM . A SM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc7 A NH2 ARG 150 A ARG 150 1_555 C SM SM . A SM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.039 ? metalc ? metalc8 B SM SM . A SM 301 1_555 E O HOH . A HOH 730 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc9 B SM SM . A SM 301 1_555 E O HOH . A HOH 772 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc10 C SM SM . A SM 302 1_555 E O HOH . A HOH 743 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc11 C SM SM . A SM 302 1_555 E O HOH . A HOH 774 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? metalc ? metalc12 C SM SM . A SM 302 1_555 E O HOH . A HOH 788 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc13 D SM SM . A SM 303 1_555 E O HOH . A HOH 753 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? # _chem_comp.formula 'Sm 3' _chem_comp.formula_weight 150.36 _chem_comp.id SM _chem_comp.mon_nstd_flag . _chem_comp.name 'SAMARIUM (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1SOI _atom_sites.fract_transf_matrix[1][1] 0.018807 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018807 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SM A 1 301 301 SM SM3 . C 2 SM A 1 302 302 SM SM3 . D 2 SM A 1 303 303 SM SM3 . E 3 HOH A 1 701 701 HOH HOH . E 3 HOH A 2 702 702 HOH HOH . E 3 HOH A 3 703 703 HOH HOH . E 3 HOH A 4 704 704 HOH HOH . E 3 HOH A 5 705 705 HOH HOH . E 3 HOH A 6 706 706 HOH HOH . E 3 HOH A 7 707 707 HOH HOH . E 3 HOH A 8 708 708 HOH HOH . E 3 HOH A 9 709 709 HOH HOH . E 3 HOH A 10 710 710 HOH HOH . E 3 HOH A 11 711 711 HOH HOH . E 3 HOH A 12 712 712 HOH HOH . E 3 HOH A 13 713 713 HOH HOH . E 3 HOH A 14 714 714 HOH HOH . E 3 HOH A 15 715 715 HOH HOH . E 3 HOH A 16 716 716 HOH HOH . E 3 HOH A 17 717 717 HOH HOH . E 3 HOH A 18 718 718 HOH HOH . E 3 HOH A 19 719 719 HOH HOH . E 3 HOH A 20 720 720 HOH HOH . E 3 HOH A 21 721 721 HOH HOH . E 3 HOH A 22 722 722 HOH HOH . E 3 HOH A 23 723 723 HOH HOH . E 3 HOH A 24 724 724 HOH HOH . E 3 HOH A 25 725 725 HOH HOH . E 3 HOH A 26 726 726 HOH HOH . E 3 HOH A 27 727 727 HOH HOH . E 3 HOH A 28 728 728 HOH HOH . E 3 HOH A 29 729 729 HOH HOH . E 3 HOH A 30 730 730 HOH HOH . E 3 HOH A 31 731 731 HOH HOH . E 3 HOH A 32 732 732 HOH HOH . E 3 HOH A 33 733 733 HOH HOH . E 3 HOH A 34 734 734 HOH HOH . E 3 HOH A 35 735 735 HOH HOH . E 3 HOH A 36 736 736 HOH HOH . E 3 HOH A 37 737 737 HOH HOH . E 3 HOH A 38 738 738 HOH HOH . E 3 HOH A 39 739 739 HOH HOH . E 3 HOH A 40 740 740 HOH HOH . E 3 HOH A 41 741 741 HOH HOH . E 3 HOH A 42 742 742 HOH HOH . E 3 HOH A 43 743 743 HOH HOH . E 3 HOH A 44 744 744 HOH HOH . E 3 HOH A 45 745 745 HOH HOH . E 3 HOH A 46 746 746 HOH HOH . E 3 HOH A 47 747 747 HOH HOH . E 3 HOH A 48 748 748 HOH HOH . E 3 HOH A 49 749 749 HOH HOH . E 3 HOH A 50 750 750 HOH HOH . E 3 HOH A 51 751 751 HOH HOH . E 3 HOH A 52 752 752 HOH HOH . E 3 HOH A 53 753 753 HOH HOH . E 3 HOH A 54 754 754 HOH HOH . E 3 HOH A 55 755 755 HOH HOH . E 3 HOH A 56 756 756 HOH HOH . E 3 HOH A 57 757 757 HOH HOH . E 3 HOH A 58 758 758 HOH HOH . E 3 HOH A 59 759 759 HOH HOH . E 3 HOH A 60 760 760 HOH HOH . E 3 HOH A 61 761 761 HOH HOH . E 3 HOH A 62 762 762 HOH HOH . E 3 HOH A 63 763 763 HOH HOH . E 3 HOH A 64 764 764 HOH HOH . E 3 HOH A 65 765 765 HOH HOH . E 3 HOH A 66 766 766 HOH HOH . E 3 HOH A 67 767 767 HOH HOH . E 3 HOH A 68 768 768 HOH HOH . E 3 HOH A 69 769 769 HOH HOH . E 3 HOH A 70 770 770 HOH HOH . E 3 HOH A 71 771 771 HOH HOH . E 3 HOH A 72 772 772 HOH HOH . E 3 HOH A 73 773 773 HOH HOH . E 3 HOH A 74 774 774 HOH HOH . E 3 HOH A 75 775 775 HOH HOH . E 3 HOH A 76 776 776 HOH HOH . E 3 HOH A 77 777 777 HOH HOH . E 3 HOH A 78 778 778 HOH HOH . E 3 HOH A 79 779 779 HOH HOH . E 3 HOH A 80 780 780 HOH HOH . E 3 HOH A 81 781 781 HOH HOH . E 3 HOH A 82 782 782 HOH HOH . E 3 HOH A 83 783 783 HOH HOH . E 3 HOH A 84 784 784 HOH HOH . E 3 HOH A 85 785 785 HOH HOH . E 3 HOH A 86 786 786 HOH HOH . E 3 HOH A 87 787 787 HOH HOH . E 3 HOH A 88 788 788 HOH HOH . E 3 HOH A 89 789 789 HOH HOH . E 3 HOH A 90 790 790 HOH HOH . E 3 HOH A 91 791 791 HOH HOH . E 3 HOH A 92 792 792 HOH HOH . E 3 HOH A 93 793 793 HOH HOH . E 3 HOH A 94 794 794 HOH HOH . E 3 HOH A 95 795 795 HOH HOH . E 3 HOH A 96 796 796 HOH HOH . E 3 HOH A 97 797 797 HOH HOH . E 3 HOH A 98 798 798 HOH HOH . E 3 HOH A 99 799 799 HOH HOH . E 3 HOH A 100 800 800 HOH HOH . E 3 HOH A 101 801 801 HOH HOH . E 3 HOH A 102 802 802 HOH HOH . E 3 HOH A 103 803 803 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol SM _atom_site.label_atom_id SM _atom_site.label_comp_id SM _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 0.203 _atom_site.Cartn_y -5.801 _atom_site.Cartn_z 16.295 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id SM _atom_site.auth_comp_id SM _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 1 #