data_1SPV # _model_server_result.job_id 3MpIOOpxuMIaTaqstXuSMA _model_server_result.datetime_utc '2024-11-24 06:04:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1spv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 1SPV # _exptl.entry_id 1SPV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.49 _cell.angle_gamma 90 _cell.entry_id 1SPV _cell.length_a 59.788 _cell.length_b 40.855 _cell.length_c 69.346 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SPV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 28 A LEU 28 1_555 A N MSE 29 A MSE 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 29 A MSE 29 1_555 A N GLY 30 A GLY 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 218 n n O1 C6 MES sing 219 n n C2 C3 MES sing 220 n n C2 H21 MES sing 221 n n C2 H22 MES sing 222 n n C3 N4 MES sing 223 n n C3 H31 MES sing 224 n n C3 H32 MES sing 225 n n N4 C5 MES sing 226 n n N4 C7 MES sing 227 n n N4 HN4 MES sing 228 n n C5 C6 MES sing 229 n n C5 H51 MES sing 230 n n C5 H52 MES sing 231 n n C6 H61 MES sing 232 n n C6 H62 MES sing 233 n n C7 C8 MES sing 234 n n C7 H71 MES sing 235 n n C7 H72 MES sing 236 n n C8 S MES sing 237 n n C8 H81 MES sing 238 n n C8 H82 MES sing 239 n n S O1S MES doub 240 n n S O2S MES doub 241 n n S O3S MES sing 242 n n # _atom_sites.entry_id 1SPV _atom_sites.fract_transf_matrix[1][1] 0.016726 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004012 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024477 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01483 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MES A 1 201 201 MES MES . C 3 HOH A 1 202 1 HOH HOH . C 3 HOH A 2 203 2 HOH HOH . C 3 HOH A 3 204 3 HOH HOH . C 3 HOH A 4 205 4 HOH HOH . C 3 HOH A 5 206 5 HOH HOH . C 3 HOH A 6 207 6 HOH HOH . C 3 HOH A 7 208 7 HOH HOH . C 3 HOH A 8 209 8 HOH HOH . C 3 HOH A 9 210 9 HOH HOH . C 3 HOH A 10 211 10 HOH HOH . C 3 HOH A 11 212 11 HOH HOH . C 3 HOH A 12 213 12 HOH HOH . C 3 HOH A 13 214 13 HOH HOH . C 3 HOH A 14 215 14 HOH HOH . C 3 HOH A 15 216 15 HOH HOH . C 3 HOH A 16 217 16 HOH HOH . C 3 HOH A 17 218 17 HOH HOH . C 3 HOH A 18 219 18 HOH HOH . C 3 HOH A 19 220 19 HOH HOH . C 3 HOH A 20 221 20 HOH HOH . C 3 HOH A 21 222 21 HOH HOH . C 3 HOH A 22 223 22 HOH HOH . C 3 HOH A 23 224 23 HOH HOH . C 3 HOH A 24 225 24 HOH HOH . C 3 HOH A 25 226 25 HOH HOH . C 3 HOH A 26 227 26 HOH HOH . C 3 HOH A 27 228 27 HOH HOH . C 3 HOH A 28 229 28 HOH HOH . C 3 HOH A 29 230 29 HOH HOH . C 3 HOH A 30 231 30 HOH HOH . C 3 HOH A 31 232 31 HOH HOH . C 3 HOH A 32 233 32 HOH HOH . C 3 HOH A 33 234 33 HOH HOH . C 3 HOH A 34 235 34 HOH HOH . C 3 HOH A 35 236 35 HOH HOH . C 3 HOH A 36 237 36 HOH HOH . C 3 HOH A 37 238 37 HOH HOH . C 3 HOH A 38 239 38 HOH HOH . C 3 HOH A 39 240 39 HOH HOH . C 3 HOH A 40 241 40 HOH HOH . C 3 HOH A 41 242 41 HOH HOH . C 3 HOH A 42 243 42 HOH HOH . C 3 HOH A 43 244 43 HOH HOH . C 3 HOH A 44 245 44 HOH HOH . C 3 HOH A 45 246 45 HOH HOH . C 3 HOH A 46 247 46 HOH HOH . C 3 HOH A 47 248 47 HOH HOH . C 3 HOH A 48 249 48 HOH HOH . C 3 HOH A 49 250 49 HOH HOH . C 3 HOH A 50 251 50 HOH HOH . C 3 HOH A 51 252 51 HOH HOH . C 3 HOH A 52 253 52 HOH HOH . C 3 HOH A 53 254 53 HOH HOH . C 3 HOH A 54 255 54 HOH HOH . C 3 HOH A 55 256 55 HOH HOH . C 3 HOH A 56 257 56 HOH HOH . C 3 HOH A 57 258 57 HOH HOH . C 3 HOH A 58 259 58 HOH HOH . C 3 HOH A 59 260 59 HOH HOH . C 3 HOH A 60 261 60 HOH HOH . C 3 HOH A 61 262 61 HOH HOH . C 3 HOH A 62 263 62 HOH HOH . C 3 HOH A 63 264 63 HOH HOH . C 3 HOH A 64 265 64 HOH HOH . C 3 HOH A 65 266 65 HOH HOH . C 3 HOH A 66 267 66 HOH HOH . C 3 HOH A 67 268 67 HOH HOH . C 3 HOH A 68 269 68 HOH HOH . C 3 HOH A 69 270 69 HOH HOH . C 3 HOH A 70 271 70 HOH HOH . C 3 HOH A 71 272 71 HOH HOH . C 3 HOH A 72 273 72 HOH HOH . C 3 HOH A 73 274 73 HOH HOH . C 3 HOH A 74 275 74 HOH HOH . C 3 HOH A 75 276 75 HOH HOH . C 3 HOH A 76 277 76 HOH HOH . C 3 HOH A 77 278 77 HOH HOH . C 3 HOH A 78 279 78 HOH HOH . C 3 HOH A 79 280 79 HOH HOH . C 3 HOH A 80 281 80 HOH HOH . C 3 HOH A 81 282 81 HOH HOH . C 3 HOH A 82 283 82 HOH HOH . C 3 HOH A 83 284 83 HOH HOH . C 3 HOH A 84 285 84 HOH HOH . C 3 HOH A 85 286 85 HOH HOH . C 3 HOH A 86 287 86 HOH HOH . C 3 HOH A 87 288 87 HOH HOH . C 3 HOH A 88 289 88 HOH HOH . C 3 HOH A 89 290 89 HOH HOH . C 3 HOH A 90 291 90 HOH HOH . C 3 HOH A 91 292 91 HOH HOH . C 3 HOH A 92 293 92 HOH HOH . C 3 HOH A 93 294 93 HOH HOH . C 3 HOH A 94 295 94 HOH HOH . C 3 HOH A 95 296 95 HOH HOH . C 3 HOH A 96 297 96 HOH HOH . C 3 HOH A 97 298 97 HOH HOH . C 3 HOH A 98 299 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . B 2 37.999 35.096 29.264 1 22.23 ? O1 MES 201 A 1 HETATM 2 C C2 MES . . . B 2 37.996 35.675 27.935 1 21.85 ? C2 MES 201 A 1 HETATM 3 C C3 MES . . . B 2 36.895 35.071 27.068 1 22.15 ? C3 MES 201 A 1 HETATM 4 N N4 MES . . . B 2 37.075 33.608 27.005 1 23.46 ? N4 MES 201 A 1 HETATM 5 C C5 MES . . . B 2 37.093 33.001 28.36 1 24.08 ? C5 MES 201 A 1 HETATM 6 C C6 MES . . . B 2 38.173 33.661 29.222 1 24.2 ? C6 MES 201 A 1 HETATM 7 C C7 MES . . . B 2 36.026 32.994 26.175 1 23.07 ? C7 MES 201 A 1 HETATM 8 C C8 MES . . . B 2 36.463 31.643 25.595 1 22.71 ? C8 MES 201 A 1 HETATM 9 S S MES . . . B 2 35.778 31.294 24.003 1 22.71 ? S MES 201 A 1 HETATM 10 O O1S MES . . . B 2 34.321 31.476 24.152 1 19.97 ? O1S MES 201 A 1 HETATM 11 O O2S MES . . . B 2 36.13 29.926 23.686 1 20.38 ? O2S MES 201 A 1 HETATM 12 O O3S MES . . . B 2 36.345 32.275 23.071 1 24.36 ? O3S MES 201 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #