data_1SQP # _model_server_result.job_id XZE_LPBHd6fAAKKr_NAwSg _model_server_result.datetime_utc '2024-11-05 15:38:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1sqp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":198}' # _entry.id 1SQP # _exptl.entry_id 1SQP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.82 _entity.id 16 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE2/S2 (INORGANIC) CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1SQP _cell.length_a 153.7 _cell.length_b 153.7 _cell.length_c 596.534 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SQP _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details 22-meric _pdbx_struct_assembly.oligomeric_count 22 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 153.7 153.7 0 # _struct_asym.details ? _struct_asym.entity_id 16 _struct_asym.id U _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 H SG CYS 24 H CYS 24 1_555 H SG CYS 68 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 H SG CYS 40 H CYS 40 1_555 H SG CYS 54 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 D SG CYS 37 D CYS 37 1_555 S CAB HEC . D HEC 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc1 C NE2 HIS 83 C HIS 83 1_555 P FE HEC . C HEC 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc2 C NE2 HIS 97 C HIS 97 1_555 O FE HEC . C HEC 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc3 C NE2 HIS 182 C HIS 182 1_555 P FE HEC . C HEC 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc4 C NE2 HIS 196 C HIS 196 1_555 O FE HEC . C HEC 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc5 D NE2 HIS 41 D HIS 41 1_555 S FE HEC . D HEC 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc6 D SD MET 160 D MET 160 1_555 S FE HEC . D HEC 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc7 E SG CYS 158 E CYS 158 1_555 U FE1 FES . E FES 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? metalc ? metalc8 E ND1 HIS 161 E HIS 161 1_555 U FE2 FES . E FES 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.874 ? # _chem_comp.formula 'Fe2 S2' _chem_comp.formula_weight 175.82 _chem_comp.id FES _chem_comp.mon_nstd_flag . _chem_comp.name 'FE2/S2 (INORGANIC) CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 FES sing 338 n n FE1 S2 FES sing 339 n n FE2 S1 FES sing 340 n n FE2 S2 FES sing 341 n n # _atom_sites.entry_id 1SQP _atom_sites.fract_transf_matrix[1][1] 0.006506 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006506 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001676 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code L 12 CDL A 1 447 1 CDL CDL . M 13 PEE A 1 448 11 PEE PEE . N 13 PEE C 1 380 12 PEE PEE . O 14 HEC C 1 381 381 HEC HEM . P 14 HEC C 1 382 382 HEC HEM . Q 15 MYX C 1 383 1 MYX MYX . R 12 CDL D 1 242 2 CDL CDL . S 14 HEC D 1 243 242 HEC HEM . T 13 PEE E 1 197 14 PEE PEE . U 16 FES E 1 198 197 FES FES . V 12 CDL G 1 82 3 CDL CDL . W 17 PLX J 1 63 21 PLX PLX . X 18 HOH A 1 500 500 HOH HOH . X 18 HOH A 2 501 501 HOH HOH . X 18 HOH A 3 502 502 HOH HOH . X 18 HOH A 4 503 503 HOH HOH . X 18 HOH A 5 504 504 HOH HOH . X 18 HOH A 6 505 505 HOH HOH . X 18 HOH A 7 506 506 HOH HOH . X 18 HOH A 8 507 507 HOH HOH . X 18 HOH A 9 508 508 HOH HOH . X 18 HOH A 10 509 509 HOH HOH . X 18 HOH A 11 510 510 HOH HOH . X 18 HOH A 12 512 512 HOH HOH . X 18 HOH A 13 513 513 HOH HOH . X 18 HOH A 14 514 514 HOH HOH . X 18 HOH A 15 515 515 HOH HOH . X 18 HOH A 16 516 516 HOH HOH . X 18 HOH A 17 517 517 HOH HOH . X 18 HOH A 18 518 518 HOH HOH . X 18 HOH A 19 519 519 HOH HOH . X 18 HOH A 20 520 520 HOH HOH . X 18 HOH A 21 521 521 HOH HOH . X 18 HOH A 22 522 522 HOH HOH . X 18 HOH A 23 523 523 HOH HOH . X 18 HOH A 24 524 524 HOH HOH . X 18 HOH A 25 525 525 HOH HOH . X 18 HOH A 26 526 526 HOH HOH . X 18 HOH A 27 530 530 HOH HOH . X 18 HOH A 28 532 532 HOH HOH . X 18 HOH A 29 533 533 HOH HOH . X 18 HOH A 30 534 534 HOH HOH . X 18 HOH A 31 535 535 HOH HOH . X 18 HOH A 32 536 536 HOH HOH . X 18 HOH A 33 537 537 HOH HOH . X 18 HOH A 34 538 538 HOH HOH . X 18 HOH A 35 539 539 HOH HOH . X 18 HOH A 36 540 540 HOH HOH . X 18 HOH A 37 541 541 HOH HOH . X 18 HOH A 38 542 542 HOH HOH . X 18 HOH A 39 543 543 HOH HOH . X 18 HOH A 40 544 544 HOH HOH . X 18 HOH A 41 545 545 HOH HOH . X 18 HOH A 42 546 546 HOH HOH . X 18 HOH A 43 568 568 HOH HOH . X 18 HOH A 44 705 705 HOH HOH . X 18 HOH A 45 706 706 HOH HOH . X 18 HOH A 46 708 708 HOH HOH . X 18 HOH A 47 710 710 HOH HOH . X 18 HOH A 48 711 711 HOH HOH . X 18 HOH A 49 712 712 HOH HOH . X 18 HOH A 50 713 713 HOH HOH . X 18 HOH A 51 714 714 HOH HOH . Y 18 HOH B 1 511 511 HOH HOH . Y 18 HOH B 2 547 547 HOH HOH . Y 18 HOH B 3 548 548 HOH HOH . Y 18 HOH B 4 549 549 HOH HOH . Y 18 HOH B 5 550 550 HOH HOH . Y 18 HOH B 6 551 551 HOH HOH . Y 18 HOH B 7 552 552 HOH HOH . Y 18 HOH B 8 553 553 HOH HOH . Y 18 HOH B 9 554 554 HOH HOH . Y 18 HOH B 10 555 555 HOH HOH . Y 18 HOH B 11 556 556 HOH HOH . Y 18 HOH B 12 557 557 HOH HOH . Y 18 HOH B 13 558 558 HOH HOH . Y 18 HOH B 14 559 559 HOH HOH . Y 18 HOH B 15 560 560 HOH HOH . Y 18 HOH B 16 561 561 HOH HOH . Y 18 HOH B 17 562 562 HOH HOH . Y 18 HOH B 18 563 563 HOH HOH . Y 18 HOH B 19 564 564 HOH HOH . Y 18 HOH B 20 565 565 HOH HOH . Y 18 HOH B 21 566 566 HOH HOH . Y 18 HOH B 22 567 567 HOH HOH . Y 18 HOH B 23 569 569 HOH HOH . Y 18 HOH B 24 570 570 HOH HOH . Y 18 HOH B 25 571 571 HOH HOH . Y 18 HOH B 26 572 572 HOH HOH . Y 18 HOH B 27 573 573 HOH HOH . Y 18 HOH B 28 574 574 HOH HOH . Y 18 HOH B 29 575 575 HOH HOH . Y 18 HOH B 30 576 576 HOH HOH . Y 18 HOH B 31 577 577 HOH HOH . Y 18 HOH B 32 578 578 HOH HOH . Y 18 HOH B 33 579 579 HOH HOH . Y 18 HOH B 34 580 580 HOH HOH . Y 18 HOH B 35 581 581 HOH HOH . Y 18 HOH B 36 582 582 HOH HOH . Y 18 HOH B 37 583 583 HOH HOH . Y 18 HOH B 38 584 584 HOH HOH . Y 18 HOH B 39 585 585 HOH HOH . Y 18 HOH B 40 586 586 HOH HOH . Y 18 HOH B 41 587 587 HOH HOH . Y 18 HOH B 42 588 588 HOH HOH . Y 18 HOH B 43 589 589 HOH HOH . Y 18 HOH B 44 590 590 HOH HOH . Y 18 HOH B 45 591 591 HOH HOH . Y 18 HOH B 46 592 592 HOH HOH . Y 18 HOH B 47 593 593 HOH HOH . Y 18 HOH B 48 594 594 HOH HOH . Y 18 HOH B 49 595 595 HOH HOH . Y 18 HOH B 50 596 596 HOH HOH . Y 18 HOH B 51 597 597 HOH HOH . Y 18 HOH B 52 598 598 HOH HOH . Y 18 HOH B 53 599 599 HOH HOH . Y 18 HOH B 54 600 600 HOH HOH . Y 18 HOH B 55 601 601 HOH HOH . Y 18 HOH B 56 602 602 HOH HOH . Y 18 HOH B 57 603 603 HOH HOH . Y 18 HOH B 58 604 604 HOH HOH . Y 18 HOH B 59 605 605 HOH HOH . Y 18 HOH B 60 606 606 HOH HOH . Y 18 HOH B 61 607 607 HOH HOH . Y 18 HOH B 62 608 608 HOH HOH . Y 18 HOH B 63 609 609 HOH HOH . Y 18 HOH B 64 610 610 HOH HOH . Y 18 HOH B 65 612 612 HOH HOH . Y 18 HOH B 66 613 613 HOH HOH . Y 18 HOH B 67 614 614 HOH HOH . Y 18 HOH B 68 615 615 HOH HOH . Y 18 HOH B 69 616 616 HOH HOH . Y 18 HOH B 70 617 617 HOH HOH . Y 18 HOH B 71 618 618 HOH HOH . Y 18 HOH B 72 619 619 HOH HOH . Y 18 HOH B 73 620 620 HOH HOH . Y 18 HOH B 74 621 621 HOH HOH . Y 18 HOH B 75 622 622 HOH HOH . Y 18 HOH B 76 623 623 HOH HOH . Y 18 HOH B 77 624 624 HOH HOH . Y 18 HOH B 78 625 625 HOH HOH . Y 18 HOH B 79 626 626 HOH HOH . Y 18 HOH B 80 627 627 HOH HOH . Y 18 HOH B 81 628 628 HOH HOH . Y 18 HOH B 82 629 629 HOH HOH . Y 18 HOH B 83 707 707 HOH HOH . Y 18 HOH B 84 709 709 HOH HOH . Z 18 HOH C 1 630 630 HOH HOH . Z 18 HOH C 2 631 631 HOH HOH . Z 18 HOH C 3 632 632 HOH HOH . Z 18 HOH C 4 633 633 HOH HOH . Z 18 HOH C 5 634 634 HOH HOH . Z 18 HOH C 6 635 635 HOH HOH . Z 18 HOH C 7 636 636 HOH HOH . Z 18 HOH C 8 637 637 HOH HOH . Z 18 HOH C 9 638 638 HOH HOH . Z 18 HOH C 10 639 639 HOH HOH . Z 18 HOH C 11 640 640 HOH HOH . Z 18 HOH C 12 641 641 HOH HOH . Z 18 HOH C 13 642 642 HOH HOH . Z 18 HOH C 14 644 644 HOH HOH . Z 18 HOH C 15 645 645 HOH HOH . Z 18 HOH C 16 646 646 HOH HOH . Z 18 HOH C 17 647 647 HOH HOH . Z 18 HOH C 18 649 649 HOH HOH . Z 18 HOH C 19 650 650 HOH HOH . Z 18 HOH C 20 651 651 HOH HOH . Z 18 HOH C 21 652 652 HOH HOH . Z 18 HOH C 22 653 653 HOH HOH . Z 18 HOH C 23 654 654 HOH HOH . Z 18 HOH C 24 655 655 HOH HOH . Z 18 HOH C 25 656 656 HOH HOH . Z 18 HOH C 26 657 657 HOH HOH . Z 18 HOH C 27 658 658 HOH HOH . Z 18 HOH C 28 659 659 HOH HOH . Z 18 HOH C 29 660 660 HOH HOH . Z 18 HOH C 30 661 661 HOH HOH . Z 18 HOH C 31 662 662 HOH HOH . Z 18 HOH C 32 663 663 HOH HOH . Z 18 HOH C 33 664 664 HOH HOH . Z 18 HOH C 34 665 665 HOH HOH . Z 18 HOH C 35 691 691 HOH HOH . Z 18 HOH C 36 692 692 HOH HOH . AA 18 HOH D 1 529 529 HOH HOH . AA 18 HOH D 2 648 648 HOH HOH . AA 18 HOH D 3 666 666 HOH HOH . AA 18 HOH D 4 667 667 HOH HOH . AA 18 HOH D 5 668 668 HOH HOH . AA 18 HOH D 6 669 669 HOH HOH . AA 18 HOH D 7 670 670 HOH HOH . AA 18 HOH D 8 671 671 HOH HOH . AA 18 HOH D 9 672 672 HOH HOH . AA 18 HOH D 10 687 687 HOH HOH . AA 18 HOH D 11 695 695 HOH HOH . BA 18 HOH E 1 673 673 HOH HOH . BA 18 HOH E 2 674 674 HOH HOH . CA 18 HOH F 1 643 643 HOH HOH . CA 18 HOH F 2 675 675 HOH HOH . CA 18 HOH F 3 676 676 HOH HOH . CA 18 HOH F 4 677 677 HOH HOH . CA 18 HOH F 5 678 678 HOH HOH . CA 18 HOH F 6 679 679 HOH HOH . CA 18 HOH F 7 680 680 HOH HOH . CA 18 HOH F 8 681 681 HOH HOH . CA 18 HOH F 9 682 682 HOH HOH . CA 18 HOH F 10 684 684 HOH HOH . CA 18 HOH F 11 686 686 HOH HOH . CA 18 HOH F 12 688 688 HOH HOH . CA 18 HOH F 13 689 689 HOH HOH . CA 18 HOH F 14 690 690 HOH HOH . CA 18 HOH F 15 694 694 HOH HOH . DA 18 HOH G 1 527 527 HOH HOH . DA 18 HOH G 2 528 528 HOH HOH . DA 18 HOH G 3 683 683 HOH HOH . DA 18 HOH G 4 685 685 HOH HOH . DA 18 HOH G 5 693 693 HOH HOH . DA 18 HOH G 6 696 696 HOH HOH . DA 18 HOH G 7 697 697 HOH HOH . DA 18 HOH G 8 698 698 HOH HOH . DA 18 HOH G 9 699 699 HOH HOH . DA 18 HOH G 10 700 700 HOH HOH . DA 18 HOH G 11 701 701 HOH HOH . EA 18 HOH I 1 531 531 HOH HOH . EA 18 HOH I 2 611 611 HOH HOH . FA 18 HOH K 1 702 702 HOH HOH . FA 18 HOH K 2 703 703 HOH HOH . FA 18 HOH K 3 704 704 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FES . . . U 16 79.522 109.06 179.345 1 166 ? FE1 FES 198 E 1 HETATM 2 FE FE2 FES . . . U 16 80.699 108.823 176.87 1 164.91 ? FE2 FES 198 E 1 HETATM 3 S S1 FES . . . U 16 81.101 110.322 178.453 1 166.24 ? S1 FES 198 E 1 HETATM 4 S S2 FES . . . U 16 78.872 107.826 177.631 1 165.75 ? S2 FES 198 E 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 4 #