data_1SRF # _model_server_result.job_id QQW_Svd7lKqqaEd6OME1gA _model_server_result.datetime_utc '2024-10-20 20:01:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1srf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":300}' # _entry.id 1SRF # _exptl.entry_id 1SRF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 298.336 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2-((3'-TERTBUTYL-4'-HYDROXYPHENYL)AZO)BENZOIC ACID" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1SRF _cell.length_a 94.2 _cell.length_b 104.8 _cell.length_c 47 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SRF _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N ASN 37 A ASN 49 1_555 C O4' MTB . A MTB 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? covale ? covale2 A C ASN 37 A ASN 49 1_555 C O4' MTB . A MTB 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? covale ? covale3 A O ASN 37 A ASN 49 1_555 C O4' MTB . A MTB 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.899 ? # _chem_comp.formula 'C17 H18 N2 O3' _chem_comp.formula_weight 298.336 _chem_comp.id MTB _chem_comp.mon_nstd_flag . _chem_comp.name "2-((3'-TERTBUTYL-4'-HYDROXYPHENYL)AZO)BENZOIC ACID" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MTB sing 205 n y C1 C6 MTB doub 206 n y C1 N1 MTB sing 207 n n C2 C3 MTB doub 208 n y C2 C MTB sing 209 n n C3 C4 MTB sing 210 n y C3 H3 MTB sing 211 n n C4 C5 MTB doub 212 n y C4 H4 MTB sing 213 n n C5 C6 MTB sing 214 n y C5 H5 MTB sing 215 n n C6 H6 MTB sing 216 n n C1' C2' MTB sing 217 n y C1' C6' MTB doub 218 n y C1' N1' MTB sing 219 n n C2' C3' MTB doub 220 n y C2' H2' MTB sing 221 n n C3' C4' MTB sing 222 n y C3' CT3 MTB sing 223 n n C4' C5' MTB doub 224 n y C4' O4' MTB sing 225 n n C5' C6' MTB sing 226 n y C5' H5' MTB sing 227 n n C6' H6' MTB sing 228 n n C O MTB doub 229 n n C OXT MTB sing 230 n n CT3 CHV MTB sing 231 n n CT3 CHW MTB sing 232 n n CT3 CHX MTB sing 233 n n CHV H11 MTB sing 234 n n CHV H12 MTB sing 235 n n CHV H13 MTB sing 236 n n CHW H21 MTB sing 237 n n CHW H22 MTB sing 238 n n CHW H23 MTB sing 239 n n CHX H31 MTB sing 240 n n CHX H32 MTB sing 241 n n CHX H33 MTB sing 242 n n N1 N1' MTB doub 243 e n OXT HXT MTB sing 244 n n O4' HO4' MTB sing 245 n n # _atom_sites.entry_id 1SRF _atom_sites.fract_transf_matrix[1][1] 0.010616 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009542 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021277 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MTB A 1 300 300 MTB MTB . D 2 MTB B 1 300 300 MTB MTB . E 3 HOH A 1 604 604 HOH HOH . E 3 HOH A 2 605 605 HOH HOH . E 3 HOH A 3 610 610 HOH HOH . E 3 HOH A 4 611 611 HOH HOH . E 3 HOH A 5 613 613 HOH HOH . E 3 HOH A 6 614 614 HOH HOH . E 3 HOH A 7 615 615 HOH HOH . E 3 HOH A 8 616 616 HOH HOH . E 3 HOH A 9 617 617 HOH HOH . E 3 HOH A 10 624 624 HOH HOH . E 3 HOH A 11 625 625 HOH HOH . E 3 HOH A 12 626 626 HOH HOH . E 3 HOH A 13 633 633 HOH HOH . E 3 HOH A 14 634 634 HOH HOH . E 3 HOH A 15 635 635 HOH HOH . E 3 HOH A 16 638 638 HOH HOH . E 3 HOH A 17 639 639 HOH HOH . E 3 HOH A 18 640 640 HOH HOH . E 3 HOH A 19 641 641 HOH HOH . E 3 HOH A 20 642 642 HOH HOH . E 3 HOH A 21 643 643 HOH HOH . E 3 HOH A 22 644 644 HOH HOH . E 3 HOH A 23 645 645 HOH HOH . E 3 HOH A 24 646 646 HOH HOH . E 3 HOH A 25 647 647 HOH HOH . E 3 HOH A 26 649 649 HOH HOH . E 3 HOH A 27 652 652 HOH HOH . E 3 HOH A 28 653 653 HOH HOH . E 3 HOH A 29 654 654 HOH HOH . E 3 HOH A 30 656 656 HOH HOH . E 3 HOH A 31 660 660 HOH HOH . E 3 HOH A 32 663 663 HOH HOH . E 3 HOH A 33 664 664 HOH HOH . E 3 HOH A 34 669 669 HOH HOH . E 3 HOH A 35 673 673 HOH HOH . E 3 HOH A 36 674 674 HOH HOH . E 3 HOH A 37 685 685 HOH HOH . E 3 HOH A 38 686 686 HOH HOH . E 3 HOH A 39 687 687 HOH HOH . E 3 HOH A 40 689 689 HOH HOH . E 3 HOH A 41 694 694 HOH HOH . E 3 HOH A 42 695 695 HOH HOH . E 3 HOH A 43 697 697 HOH HOH . E 3 HOH A 44 699 699 HOH HOH . E 3 HOH A 45 700 700 HOH HOH . E 3 HOH A 46 703 703 HOH HOH . E 3 HOH A 47 705 705 HOH HOH . E 3 HOH A 48 706 706 HOH HOH . E 3 HOH A 49 707 707 HOH HOH . E 3 HOH A 50 708 708 HOH HOH . E 3 HOH A 51 709 709 HOH HOH . E 3 HOH A 52 711 711 HOH HOH . E 3 HOH A 53 712 712 HOH HOH . E 3 HOH A 54 713 713 HOH HOH . E 3 HOH A 55 714 714 HOH HOH . E 3 HOH A 56 715 715 HOH HOH . E 3 HOH A 57 716 716 HOH HOH . E 3 HOH A 58 717 717 HOH HOH . E 3 HOH A 59 720 720 HOH HOH . E 3 HOH A 60 721 721 HOH HOH . E 3 HOH A 61 722 722 HOH HOH . E 3 HOH A 62 724 724 HOH HOH . E 3 HOH A 63 725 725 HOH HOH . E 3 HOH A 64 727 727 HOH HOH . E 3 HOH A 65 730 730 HOH HOH . E 3 HOH A 66 731 731 HOH HOH . E 3 HOH A 67 733 733 HOH HOH . E 3 HOH A 68 737 737 HOH HOH . E 3 HOH A 69 738 738 HOH HOH . E 3 HOH A 70 741 741 HOH HOH . E 3 HOH A 71 744 744 HOH HOH . E 3 HOH A 72 745 745 HOH HOH . E 3 HOH A 73 746 746 HOH HOH . E 3 HOH A 74 747 747 HOH HOH . E 3 HOH A 75 749 749 HOH HOH . E 3 HOH A 76 751 751 HOH HOH . E 3 HOH A 77 753 753 HOH HOH . E 3 HOH A 78 755 755 HOH HOH . E 3 HOH A 79 756 756 HOH HOH . E 3 HOH A 80 757 757 HOH HOH . F 3 HOH B 1 601 601 HOH HOH . F 3 HOH B 2 602 602 HOH HOH . F 3 HOH B 3 603 603 HOH HOH . F 3 HOH B 4 606 606 HOH HOH . F 3 HOH B 5 607 607 HOH HOH . F 3 HOH B 6 608 608 HOH HOH . F 3 HOH B 7 609 609 HOH HOH . F 3 HOH B 8 612 612 HOH HOH . F 3 HOH B 9 618 618 HOH HOH . F 3 HOH B 10 619 619 HOH HOH . F 3 HOH B 11 620 620 HOH HOH . F 3 HOH B 12 621 621 HOH HOH . F 3 HOH B 13 622 622 HOH HOH . F 3 HOH B 14 623 623 HOH HOH . F 3 HOH B 15 627 627 HOH HOH . F 3 HOH B 16 628 628 HOH HOH . F 3 HOH B 17 629 629 HOH HOH . F 3 HOH B 18 630 630 HOH HOH . F 3 HOH B 19 631 631 HOH HOH . F 3 HOH B 20 632 632 HOH HOH . F 3 HOH B 21 636 636 HOH HOH . F 3 HOH B 22 637 637 HOH HOH . F 3 HOH B 23 648 648 HOH HOH . F 3 HOH B 24 650 650 HOH HOH . F 3 HOH B 25 651 651 HOH HOH . F 3 HOH B 26 655 655 HOH HOH . F 3 HOH B 27 657 657 HOH HOH . F 3 HOH B 28 658 658 HOH HOH . F 3 HOH B 29 659 659 HOH HOH . F 3 HOH B 30 661 661 HOH HOH . F 3 HOH B 31 662 662 HOH HOH . F 3 HOH B 32 665 665 HOH HOH . F 3 HOH B 33 666 666 HOH HOH . F 3 HOH B 34 667 667 HOH HOH . F 3 HOH B 35 668 668 HOH HOH . F 3 HOH B 36 670 670 HOH HOH . F 3 HOH B 37 671 671 HOH HOH . F 3 HOH B 38 672 672 HOH HOH . F 3 HOH B 39 675 675 HOH HOH . F 3 HOH B 40 676 676 HOH HOH . F 3 HOH B 41 677 677 HOH HOH . F 3 HOH B 42 678 678 HOH HOH . F 3 HOH B 43 679 679 HOH HOH . F 3 HOH B 44 680 680 HOH HOH . F 3 HOH B 45 681 681 HOH HOH . F 3 HOH B 46 682 682 HOH HOH . F 3 HOH B 47 683 683 HOH HOH . F 3 HOH B 48 684 684 HOH HOH . F 3 HOH B 49 688 688 HOH HOH . F 3 HOH B 50 690 690 HOH HOH . F 3 HOH B 51 691 691 HOH HOH . F 3 HOH B 52 692 692 HOH HOH . F 3 HOH B 53 693 693 HOH HOH . F 3 HOH B 54 696 696 HOH HOH . F 3 HOH B 55 698 698 HOH HOH . F 3 HOH B 56 701 701 HOH HOH . F 3 HOH B 57 702 702 HOH HOH . F 3 HOH B 58 704 704 HOH HOH . F 3 HOH B 59 710 710 HOH HOH . F 3 HOH B 60 718 718 HOH HOH . F 3 HOH B 61 719 719 HOH HOH . F 3 HOH B 62 723 723 HOH HOH . F 3 HOH B 63 726 726 HOH HOH . F 3 HOH B 64 728 728 HOH HOH . F 3 HOH B 65 729 729 HOH HOH . F 3 HOH B 66 732 732 HOH HOH . F 3 HOH B 67 734 734 HOH HOH . F 3 HOH B 68 735 735 HOH HOH . F 3 HOH B 69 736 736 HOH HOH . F 3 HOH B 70 739 739 HOH HOH . F 3 HOH B 71 740 740 HOH HOH . F 3 HOH B 72 742 742 HOH HOH . F 3 HOH B 73 743 743 HOH HOH . F 3 HOH B 74 748 748 HOH HOH . F 3 HOH B 75 750 750 HOH HOH . F 3 HOH B 76 752 752 HOH HOH . F 3 HOH B 77 754 754 HOH HOH . F 3 HOH B 78 758 758 HOH HOH . F 3 HOH B 79 759 759 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MTB . . . D 2 18.467 4.752 12.005 1 18.79 ? C1 MTB 300 B 1 HETATM 2 C C2 MTB . . . D 2 17.261 5.284 11.592 1 18.23 ? C2 MTB 300 B 1 HETATM 3 C C3 MTB . . . D 2 16.936 5.301 10.233 1 18.16 ? C3 MTB 300 B 1 HETATM 4 C C4 MTB . . . D 2 17.839 4.814 9.295 1 18.07 ? C4 MTB 300 B 1 HETATM 5 C C5 MTB . . . D 2 19.069 4.292 9.717 1 18.26 ? C5 MTB 300 B 1 HETATM 6 C C6 MTB . . . D 2 19.393 4.248 11.077 1 18.28 ? C6 MTB 300 B 1 HETATM 7 C C1' MTB . . . D 2 20.529 4.188 15.017 1 21.4 ? C1' MTB 300 B 1 HETATM 8 C C2' MTB . . . D 2 19.898 4.94 16 1 22.03 ? C2' MTB 300 B 1 HETATM 9 C C3' MTB . . . D 2 20.325 4.832 17.324 1 22.13 ? C3' MTB 300 B 1 HETATM 10 C C4' MTB . . . D 2 21.341 3.949 17.688 1 22.39 ? C4' MTB 300 B 1 HETATM 11 C C5' MTB . . . D 2 21.982 3.192 16.69 1 22.13 ? C5' MTB 300 B 1 HETATM 12 C C6' MTB . . . D 2 21.572 3.312 15.355 1 22.08 ? C6' MTB 300 B 1 HETATM 13 C C MTB . . . D 2 16.254 5.846 12.619 1 17.96 ? C MTB 300 B 1 HETATM 14 C CT3 MTB . . . D 2 19.62 5.692 18.376 1 22.41 ? CT3 MTB 300 B 1 HETATM 15 C CHV MTB . . . D 2 18.829 6.832 17.664 1 22.82 ? CHV MTB 300 B 1 HETATM 16 C CHW MTB . . . D 2 20.696 6.291 19.267 1 22.21 ? CHW MTB 300 B 1 HETATM 17 C CHX MTB . . . D 2 18.561 4.796 19.002 1 22.54 ? CHX MTB 300 B 1 HETATM 18 N N1 MTB . . . D 2 18.826 4.696 13.452 1 19.09 ? N1 MTB 300 B 1 HETATM 19 N N1' MTB . . . D 2 20.033 4.337 13.642 1 20.95 ? N1' MTB 300 B 1 HETATM 20 O O MTB . . . D 2 15.09 6.439 12.081 1 16.99 ? O MTB 300 B 1 HETATM 21 O OXT MTB . . . D 2 16.433 5.79 13.82 1 17.9 ? OXT MTB 300 B 1 HETATM 22 O O4' MTB . . . D 2 21.724 3.856 19.058 1 23.21 ? O4' MTB 300 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #