data_1SRG # _model_server_result.job_id u_bMNw2Q9i-CawfARfvnhw _model_server_result.datetime_utc '2024-10-19 22:35:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1srg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":300}' # _entry.id 1SRG # _exptl.entry_id 1SRG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.257 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2-((3'-METHYL-4'-HYDROXYPHENYL)AZO)BENZOIC ACID" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1SRG _cell.length_a 95.2 _cell.length_b 106.5 _cell.length_c 47.9 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SRG _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PQS octameric 8 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1,2 A,B,C,D,E,F 2 1,3,4,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 95.2 0 0 4 'crystal symmetry operation' 3_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 95.2 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C14 H12 N2 O3' _chem_comp.formula_weight 256.257 _chem_comp.id MHB _chem_comp.mon_nstd_flag . _chem_comp.name "2-((3'-METHYL-4'-HYDROXYPHENYL)AZO)BENZOIC ACID" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MHB sing 205 n y C1 C6 MHB doub 206 n y C1 N1 MHB sing 207 n n C2 C3 MHB doub 208 n y C2 C MHB sing 209 n n C3 C4 MHB sing 210 n y C3 H3 MHB sing 211 n n C4 C5 MHB doub 212 n y C4 H4 MHB sing 213 n n C5 C6 MHB sing 214 n y C5 H5 MHB sing 215 n n C6 H6 MHB sing 216 n n C1' C2' MHB sing 217 n y C1' C6' MHB doub 218 n y C1' N1' MHB sing 219 n n C2' C3' MHB doub 220 n y C2' H2' MHB sing 221 n n C3' C4' MHB sing 222 n y C3' CM3 MHB sing 223 n n C4' C5' MHB doub 224 n y C4' O4' MHB sing 225 n n C5' C6' MHB sing 226 n y C5' H5' MHB sing 227 n n C6' H6' MHB sing 228 n n C O MHB doub 229 n n C OXT MHB sing 230 n n CM3 HM31 MHB sing 231 n n CM3 HM32 MHB sing 232 n n CM3 HM33 MHB sing 233 n n N1 N1' MHB doub 234 e n OXT HXT MHB sing 235 n n O4' HO4' MHB sing 236 n n # _atom_sites.entry_id 1SRG _atom_sites.fract_transf_matrix[1][1] 0.010504 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00939 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020877 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MHB A 1 300 300 MHB MHB . D 2 MHB B 1 300 300 MHB MHB . E 3 HOH A 1 605 605 HOH HOH . E 3 HOH A 2 606 606 HOH HOH . E 3 HOH A 3 609 609 HOH HOH . E 3 HOH A 4 610 610 HOH HOH . E 3 HOH A 5 613 613 HOH HOH . E 3 HOH A 6 614 614 HOH HOH . E 3 HOH A 7 616 616 HOH HOH . E 3 HOH A 8 617 617 HOH HOH . E 3 HOH A 9 618 618 HOH HOH . E 3 HOH A 10 619 619 HOH HOH . E 3 HOH A 11 620 620 HOH HOH . E 3 HOH A 12 627 627 HOH HOH . E 3 HOH A 13 629 629 HOH HOH . E 3 HOH A 14 636 636 HOH HOH . E 3 HOH A 15 637 637 HOH HOH . E 3 HOH A 16 638 638 HOH HOH . E 3 HOH A 17 641 641 HOH HOH . E 3 HOH A 18 642 642 HOH HOH . E 3 HOH A 19 643 643 HOH HOH . E 3 HOH A 20 644 644 HOH HOH . E 3 HOH A 21 645 645 HOH HOH . E 3 HOH A 22 646 646 HOH HOH . E 3 HOH A 23 647 647 HOH HOH . E 3 HOH A 24 648 648 HOH HOH . E 3 HOH A 25 649 649 HOH HOH . E 3 HOH A 26 654 654 HOH HOH . E 3 HOH A 27 655 655 HOH HOH . E 3 HOH A 28 656 656 HOH HOH . E 3 HOH A 29 658 658 HOH HOH . E 3 HOH A 30 661 661 HOH HOH . E 3 HOH A 31 663 663 HOH HOH . E 3 HOH A 32 664 664 HOH HOH . E 3 HOH A 33 665 665 HOH HOH . E 3 HOH A 34 670 670 HOH HOH . E 3 HOH A 35 674 674 HOH HOH . E 3 HOH A 36 685 685 HOH HOH . E 3 HOH A 37 686 686 HOH HOH . E 3 HOH A 38 687 687 HOH HOH . E 3 HOH A 39 689 689 HOH HOH . E 3 HOH A 40 695 695 HOH HOH . E 3 HOH A 41 696 696 HOH HOH . E 3 HOH A 42 697 697 HOH HOH . E 3 HOH A 43 699 699 HOH HOH . E 3 HOH A 44 701 701 HOH HOH . E 3 HOH A 45 704 704 HOH HOH . E 3 HOH A 46 706 706 HOH HOH . E 3 HOH A 47 707 707 HOH HOH . E 3 HOH A 48 708 708 HOH HOH . E 3 HOH A 49 709 709 HOH HOH . E 3 HOH A 50 710 710 HOH HOH . E 3 HOH A 51 711 711 HOH HOH . E 3 HOH A 52 712 712 HOH HOH . E 3 HOH A 53 713 713 HOH HOH . E 3 HOH A 54 718 718 HOH HOH . E 3 HOH A 55 719 719 HOH HOH . E 3 HOH A 56 720 720 HOH HOH . E 3 HOH A 57 722 722 HOH HOH . E 3 HOH A 58 723 723 HOH HOH . E 3 HOH A 59 725 725 HOH HOH . E 3 HOH A 60 726 726 HOH HOH . E 3 HOH A 61 727 727 HOH HOH . E 3 HOH A 62 729 729 HOH HOH . E 3 HOH A 63 730 730 HOH HOH . E 3 HOH A 64 735 735 HOH HOH . E 3 HOH A 65 738 738 HOH HOH . E 3 HOH A 66 739 739 HOH HOH . E 3 HOH A 67 742 742 HOH HOH . E 3 HOH A 68 743 743 HOH HOH . E 3 HOH A 69 744 744 HOH HOH . E 3 HOH A 70 746 746 HOH HOH . E 3 HOH A 71 747 747 HOH HOH . E 3 HOH A 72 749 749 HOH HOH . F 3 HOH B 1 601 601 HOH HOH . F 3 HOH B 2 602 602 HOH HOH . F 3 HOH B 3 603 603 HOH HOH . F 3 HOH B 4 604 604 HOH HOH . F 3 HOH B 5 607 607 HOH HOH . F 3 HOH B 6 608 608 HOH HOH . F 3 HOH B 7 611 611 HOH HOH . F 3 HOH B 8 612 612 HOH HOH . F 3 HOH B 9 615 615 HOH HOH . F 3 HOH B 10 621 621 HOH HOH . F 3 HOH B 11 622 622 HOH HOH . F 3 HOH B 12 623 623 HOH HOH . F 3 HOH B 13 624 624 HOH HOH . F 3 HOH B 14 625 625 HOH HOH . F 3 HOH B 15 626 626 HOH HOH . F 3 HOH B 16 628 628 HOH HOH . F 3 HOH B 17 630 630 HOH HOH . F 3 HOH B 18 631 631 HOH HOH . F 3 HOH B 19 632 632 HOH HOH . F 3 HOH B 20 633 633 HOH HOH . F 3 HOH B 21 634 634 HOH HOH . F 3 HOH B 22 635 635 HOH HOH . F 3 HOH B 23 639 639 HOH HOH . F 3 HOH B 24 640 640 HOH HOH . F 3 HOH B 25 650 650 HOH HOH . F 3 HOH B 26 651 651 HOH HOH . F 3 HOH B 27 652 652 HOH HOH . F 3 HOH B 28 653 653 HOH HOH . F 3 HOH B 29 657 657 HOH HOH . F 3 HOH B 30 659 659 HOH HOH . F 3 HOH B 31 660 660 HOH HOH . F 3 HOH B 32 662 662 HOH HOH . F 3 HOH B 33 666 666 HOH HOH . F 3 HOH B 34 667 667 HOH HOH . F 3 HOH B 35 668 668 HOH HOH . F 3 HOH B 36 669 669 HOH HOH . F 3 HOH B 37 671 671 HOH HOH . F 3 HOH B 38 672 672 HOH HOH . F 3 HOH B 39 673 673 HOH HOH . F 3 HOH B 40 675 675 HOH HOH . F 3 HOH B 41 676 676 HOH HOH . F 3 HOH B 42 677 677 HOH HOH . F 3 HOH B 43 678 678 HOH HOH . F 3 HOH B 44 679 679 HOH HOH . F 3 HOH B 45 680 680 HOH HOH . F 3 HOH B 46 681 681 HOH HOH . F 3 HOH B 47 682 682 HOH HOH . F 3 HOH B 48 683 683 HOH HOH . F 3 HOH B 49 684 684 HOH HOH . F 3 HOH B 50 688 688 HOH HOH . F 3 HOH B 51 690 690 HOH HOH . F 3 HOH B 52 691 691 HOH HOH . F 3 HOH B 53 692 692 HOH HOH . F 3 HOH B 54 693 693 HOH HOH . F 3 HOH B 55 694 694 HOH HOH . F 3 HOH B 56 698 698 HOH HOH . F 3 HOH B 57 700 700 HOH HOH . F 3 HOH B 58 702 702 HOH HOH . F 3 HOH B 59 703 703 HOH HOH . F 3 HOH B 60 705 705 HOH HOH . F 3 HOH B 61 714 714 HOH HOH . F 3 HOH B 62 715 715 HOH HOH . F 3 HOH B 63 716 716 HOH HOH . F 3 HOH B 64 717 717 HOH HOH . F 3 HOH B 65 721 721 HOH HOH . F 3 HOH B 66 724 724 HOH HOH . F 3 HOH B 67 728 728 HOH HOH . F 3 HOH B 68 731 731 HOH HOH . F 3 HOH B 69 732 732 HOH HOH . F 3 HOH B 70 733 733 HOH HOH . F 3 HOH B 71 734 734 HOH HOH . F 3 HOH B 72 736 736 HOH HOH . F 3 HOH B 73 737 737 HOH HOH . F 3 HOH B 74 740 740 HOH HOH . F 3 HOH B 75 741 741 HOH HOH . F 3 HOH B 76 745 745 HOH HOH . F 3 HOH B 77 748 748 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MHB . . . D 2 33.351 12.183 -5.443 1 17.49 ? C1 MHB 300 B 1 HETATM 2 C C2 MHB . . . D 2 34.589 12.105 -4.828 1 16.72 ? C2 MHB 300 B 1 HETATM 3 C C3 MHB . . . D 2 34.866 11.085 -3.901 1 16.68 ? C3 MHB 300 B 1 HETATM 4 C C4 MHB . . . D 2 33.879 10.144 -3.63 1 16.85 ? C4 MHB 300 B 1 HETATM 5 C C5 MHB . . . D 2 32.63 10.187 -4.264 1 16.87 ? C5 MHB 300 B 1 HETATM 6 C C6 MHB . . . D 2 32.358 11.207 -5.181 1 17.09 ? C6 MHB 300 B 1 HETATM 7 C C1' MHB . . . D 2 31.74 14.165 -8.099 1 22.29 ? C1' MHB 300 B 1 HETATM 8 C C2' MHB . . . D 2 32.478 15.351 -8.145 1 22.67 ? C2' MHB 300 B 1 HETATM 9 C C3' MHB . . . D 2 32.055 16.422 -8.924 1 22.87 ? C3' MHB 300 B 1 HETATM 10 C C4' MHB . . . D 2 30.862 16.298 -9.643 1 23.19 ? C4' MHB 300 B 1 HETATM 11 C C5' MHB . . . D 2 30.022 15.204 -9.659 1 22.85 ? C5' MHB 300 B 1 HETATM 12 C C6' MHB . . . D 2 30.55 14.01 -8.775 1 22.77 ? C6' MHB 300 B 1 HETATM 13 C C MHB . . . D 2 35.659 13.182 -5.041 1 16.74 ? C MHB 300 B 1 HETATM 14 C CM3 MHB . . . D 2 32.848 17.728 -8.948 1 22.94 ? CM3 MHB 300 B 1 HETATM 15 N N1 MHB . . . D 2 33.045 13.266 -6.389 1 18.16 ? N1 MHB 300 B 1 HETATM 16 N N1' MHB . . . D 2 32.154 13.014 -7.274 1 20.83 ? N1' MHB 300 B 1 HETATM 17 O O MHB . . . D 2 35.496 14.161 -5.747 1 17.02 ? O MHB 300 B 1 HETATM 18 O OXT MHB . . . D 2 36.822 13.041 -4.215 1 15.45 ? OXT MHB 300 B 1 HETATM 19 O O4' MHB . . . D 2 30.418 17.468 -10.476 1 23.69 ? O4' MHB 300 B 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 19 #