data_1STP # _model_server_result.job_id iltS71mdYjGR9fWb_B7t9w _model_server_result.datetime_utc '2024-12-01 11:04:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1stp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1STP # _exptl.entry_id 1STP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.311 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BIOTIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1STP _cell.length_a 99.4 _cell.length_b 99.4 _cell.length_c 125.8 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1STP _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 10_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H16 N2 O3 S' _chem_comp.formula_weight 244.311 _chem_comp.id BTN _chem_comp.mon_nstd_flag . _chem_comp.name BIOTIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 O11 BTN doub 70 n n C11 O12 BTN sing 71 n n C11 C10 BTN sing 72 n n O12 HO2 BTN sing 73 n n C10 C9 BTN sing 74 n n C10 H101 BTN sing 75 n n C10 H102 BTN sing 76 n n C9 C8 BTN sing 77 n n C9 H91 BTN sing 78 n n C9 H92 BTN sing 79 n n C8 C7 BTN sing 80 n n C8 H81 BTN sing 81 n n C8 H82 BTN sing 82 n n C7 C2 BTN sing 83 n n C7 H71 BTN sing 84 n n C7 H72 BTN sing 85 n n C2 S1 BTN sing 86 n n C2 C4 BTN sing 87 n n C2 H2 BTN sing 88 n n S1 C6 BTN sing 89 n n C6 C5 BTN sing 90 n n C6 H61 BTN sing 91 n n C6 H62 BTN sing 92 n n C5 N1 BTN sing 93 n n C5 C4 BTN sing 94 n n C5 H5 BTN sing 95 n n N1 C3 BTN sing 96 n n N1 HN1 BTN sing 97 n n C3 O3 BTN doub 98 n n C3 N2 BTN sing 99 n n N2 C4 BTN sing 100 n n N2 HN2 BTN sing 101 n n C4 H4 BTN sing 102 n n # _atom_sites.entry_id 1STP _atom_sites.fract_transf_matrix[1][1] 0.01006 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01006 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007949 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BTN A 1 300 300 BTN BTN . C 3 HOH A 1 311 311 HOH HOH . C 3 HOH A 2 312 312 HOH HOH . C 3 HOH A 3 313 313 HOH HOH . C 3 HOH A 4 314 314 HOH HOH . C 3 HOH A 5 315 315 HOH HOH . C 3 HOH A 6 316 316 HOH HOH . C 3 HOH A 7 317 317 HOH HOH . C 3 HOH A 8 318 318 HOH HOH . C 3 HOH A 9 319 319 HOH HOH . C 3 HOH A 10 320 320 HOH HOH . C 3 HOH A 11 321 321 HOH HOH . C 3 HOH A 12 322 322 HOH HOH . C 3 HOH A 13 323 323 HOH HOH . C 3 HOH A 14 324 324 HOH HOH . C 3 HOH A 15 326 326 HOH HOH . C 3 HOH A 16 327 327 HOH HOH . C 3 HOH A 17 329 329 HOH HOH . C 3 HOH A 18 330 330 HOH HOH . C 3 HOH A 19 331 331 HOH HOH . C 3 HOH A 20 332 332 HOH HOH . C 3 HOH A 21 333 333 HOH HOH . C 3 HOH A 22 334 334 HOH HOH . C 3 HOH A 23 335 335 HOH HOH . C 3 HOH A 24 336 336 HOH HOH . C 3 HOH A 25 338 338 HOH HOH . C 3 HOH A 26 339 339 HOH HOH . C 3 HOH A 27 340 340 HOH HOH . C 3 HOH A 28 341 341 HOH HOH . C 3 HOH A 29 342 342 HOH HOH . C 3 HOH A 30 343 343 HOH HOH . C 3 HOH A 31 344 344 HOH HOH . C 3 HOH A 32 345 345 HOH HOH . C 3 HOH A 33 346 346 HOH HOH . C 3 HOH A 34 347 347 HOH HOH . C 3 HOH A 35 350 350 HOH HOH . C 3 HOH A 36 351 351 HOH HOH . C 3 HOH A 37 352 352 HOH HOH . C 3 HOH A 38 354 354 HOH HOH . C 3 HOH A 39 355 355 HOH HOH . C 3 HOH A 40 358 358 HOH HOH . C 3 HOH A 41 361 361 HOH HOH . C 3 HOH A 42 363 363 HOH HOH . C 3 HOH A 43 364 364 HOH HOH . C 3 HOH A 44 365 365 HOH HOH . C 3 HOH A 45 366 366 HOH HOH . C 3 HOH A 46 370 370 HOH HOH . C 3 HOH A 47 371 371 HOH HOH . C 3 HOH A 48 372 372 HOH HOH . C 3 HOH A 49 373 373 HOH HOH . C 3 HOH A 50 375 375 HOH HOH . C 3 HOH A 51 379 379 HOH HOH . C 3 HOH A 52 381 381 HOH HOH . C 3 HOH A 53 383 383 HOH HOH . C 3 HOH A 54 384 384 HOH HOH . C 3 HOH A 55 386 386 HOH HOH . C 3 HOH A 56 387 387 HOH HOH . C 3 HOH A 57 389 389 HOH HOH . C 3 HOH A 58 390 390 HOH HOH . C 3 HOH A 59 392 392 HOH HOH . C 3 HOH A 60 393 393 HOH HOH . C 3 HOH A 61 394 394 HOH HOH . C 3 HOH A 62 398 398 HOH HOH . C 3 HOH A 63 399 399 HOH HOH . C 3 HOH A 64 400 400 HOH HOH . C 3 HOH A 65 401 401 HOH HOH . C 3 HOH A 66 406 406 HOH HOH . C 3 HOH A 67 407 407 HOH HOH . C 3 HOH A 68 409 409 HOH HOH . C 3 HOH A 69 410 410 HOH HOH . C 3 HOH A 70 411 411 HOH HOH . C 3 HOH A 71 413 413 HOH HOH . C 3 HOH A 72 415 415 HOH HOH . C 3 HOH A 73 416 416 HOH HOH . C 3 HOH A 74 429 429 HOH HOH . C 3 HOH A 75 431 431 HOH HOH . C 3 HOH A 76 432 432 HOH HOH . C 3 HOH A 77 433 433 HOH HOH . C 3 HOH A 78 435 435 HOH HOH . C 3 HOH A 79 436 436 HOH HOH . C 3 HOH A 80 438 438 HOH HOH . C 3 HOH A 81 442 442 HOH HOH . C 3 HOH A 82 443 443 HOH HOH . C 3 HOH A 83 445 445 HOH HOH . C 3 HOH A 84 449 449 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTN . . . B 2 9.051 4.576 -14.459 1 21.57 ? C11 BTN 300 A 1 HETATM 2 O O11 BTN . . . B 2 8.147 5.373 -14.172 1 21.65 ? O11 BTN 300 A 1 HETATM 3 O O12 BTN . . . B 2 8.697 3.498 -15.132 1 22.67 ? O12 BTN 300 A 1 HETATM 4 C C10 BTN . . . B 2 10.321 4.413 -13.702 1 20.77 ? C10 BTN 300 A 1 HETATM 5 C C9 BTN . . . B 2 10.215 3.247 -12.658 1 20.09 ? C9 BTN 300 A 1 HETATM 6 C C8 BTN . . . B 2 11.487 2.972 -11.964 1 19.24 ? C8 BTN 300 A 1 HETATM 7 C C7 BTN . . . B 2 11.627 1.558 -11.402 1 18.33 ? C7 BTN 300 A 1 HETATM 8 C C2 BTN . . . B 2 10.923 1.086 -10.195 1 17.74 ? C2 BTN 300 A 1 HETATM 9 S S1 BTN . . . B 2 10.884 2.103 -8.662 1 16.59 ? S1 BTN 300 A 1 HETATM 10 C C6 BTN . . . B 2 10.299 0.62 -7.76 1 17.06 ? C6 BTN 300 A 1 HETATM 11 C C5 BTN . . . B 2 11.142 -0.543 -8.274 1 17.47 ? C5 BTN 300 A 1 HETATM 12 N N1 BTN . . . B 2 12.443 -0.631 -7.613 1 17.73 ? N1 BTN 300 A 1 HETATM 13 C C3 BTN . . . B 2 13.467 -0.443 -8.453 1 17.95 ? C3 BTN 300 A 1 HETATM 14 O O3 BTN . . . B 2 14.692 -0.446 -8.205 1 17.93 ? O3 BTN 300 A 1 HETATM 15 N N2 BTN . . . B 2 12.974 -0.237 -9.695 1 17.92 ? N2 BTN 300 A 1 HETATM 16 C C4 BTN . . . B 2 11.513 -0.265 -9.727 1 17.65 ? C4 BTN 300 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 24 _model_server_stats.element_count 16 #