data_1SU5
#
_model_server_result.job_id            y5GLEW30xGamG2Bs4GKsaQ 
_model_server_result.datetime_utc      '2024-11-23 22:40:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1su5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":1306}' 
#
_entry.id    1SU5 
#
_exptl.entry_id    1SU5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1SU5 
_cell.length_a            86.756 
_cell.length_b            86.756 
_cell.length_c            163.376 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1SU5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 O N N 
? 4 P N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     1SU5 
_atom_sites.fract_transf_matrix[1][1]    0.011527 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011527 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006121 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PGA A 1 300 300 PGA PGA . 
D 3 SO4 A 1 301 4 SO4 SO4 . 
E 3 SO4 A 1 302 7 SO4 SO4 . 
F 3 SO4 A 1 303 11 SO4 SO4 . 
G 3 SO4 A 1 304 12 SO4 SO4 . 
H 4 GOL A 1 305 3 GOL GOL . 
I 2 PGA B 1 1300 300 PGA PGA . 
J 3 SO4 B 1 1301 5 SO4 SO4 . 
K 3 SO4 B 1 1302 6 SO4 SO4 . 
L 3 SO4 B 1 1303 8 SO4 SO4 . 
M 3 SO4 B 1 1304 9 SO4 SO4 . 
N 3 SO4 B 1 1305 10 SO4 SO4 . 
O 4 GOL B 1 1 1 GOL GOL . 
P 4 GOL B 1 1306 2 GOL GOL . 
Q 5 HOH A 1 306 14 HOH HOH . 
Q 5 HOH A 2 307 19 HOH HOH . 
Q 5 HOH A 3 308 23 HOH HOH . 
Q 5 HOH A 4 309 24 HOH HOH . 
Q 5 HOH A 5 310 26 HOH HOH . 
Q 5 HOH A 6 311 28 HOH HOH . 
Q 5 HOH A 7 312 31 HOH HOH . 
Q 5 HOH A 8 313 33 HOH HOH . 
Q 5 HOH A 9 314 34 HOH HOH . 
Q 5 HOH A 10 315 36 HOH HOH . 
Q 5 HOH A 11 316 37 HOH HOH . 
Q 5 HOH A 12 317 38 HOH HOH . 
Q 5 HOH A 13 318 39 HOH HOH . 
Q 5 HOH A 14 319 40 HOH HOH . 
Q 5 HOH A 15 320 44 HOH HOH . 
Q 5 HOH A 16 321 46 HOH HOH . 
Q 5 HOH A 17 322 47 HOH HOH . 
Q 5 HOH A 18 323 48 HOH HOH . 
Q 5 HOH A 19 324 49 HOH HOH . 
Q 5 HOH A 20 325 51 HOH HOH . 
Q 5 HOH A 21 326 52 HOH HOH . 
Q 5 HOH A 22 327 54 HOH HOH . 
Q 5 HOH A 23 328 55 HOH HOH . 
Q 5 HOH A 24 329 57 HOH HOH . 
Q 5 HOH A 25 330 58 HOH HOH . 
Q 5 HOH A 26 331 59 HOH HOH . 
Q 5 HOH A 27 332 60 HOH HOH . 
Q 5 HOH A 28 333 63 HOH HOH . 
Q 5 HOH A 29 334 64 HOH HOH . 
Q 5 HOH A 30 335 67 HOH HOH . 
Q 5 HOH A 31 336 68 HOH HOH . 
Q 5 HOH A 32 337 70 HOH HOH . 
Q 5 HOH A 33 338 73 HOH HOH . 
Q 5 HOH A 34 339 75 HOH HOH . 
Q 5 HOH A 35 340 79 HOH HOH . 
Q 5 HOH A 36 341 81 HOH HOH . 
Q 5 HOH A 37 342 82 HOH HOH . 
Q 5 HOH A 38 343 88 HOH HOH . 
Q 5 HOH A 39 344 89 HOH HOH . 
Q 5 HOH A 40 345 92 HOH HOH . 
Q 5 HOH A 41 346 93 HOH HOH . 
Q 5 HOH A 42 347 94 HOH HOH . 
Q 5 HOH A 43 348 97 HOH HOH . 
Q 5 HOH A 44 349 100 HOH HOH . 
Q 5 HOH A 45 350 102 HOH HOH . 
Q 5 HOH A 46 351 103 HOH HOH . 
Q 5 HOH A 47 352 108 HOH HOH . 
Q 5 HOH A 48 353 109 HOH HOH . 
Q 5 HOH A 49 354 110 HOH HOH . 
Q 5 HOH A 50 355 112 HOH HOH . 
Q 5 HOH A 51 356 113 HOH HOH . 
Q 5 HOH A 52 357 115 HOH HOH . 
Q 5 HOH A 53 358 118 HOH HOH . 
Q 5 HOH A 54 359 119 HOH HOH . 
Q 5 HOH A 55 360 120 HOH HOH . 
Q 5 HOH A 56 361 124 HOH HOH . 
Q 5 HOH A 57 362 125 HOH HOH . 
Q 5 HOH A 58 363 128 HOH HOH . 
Q 5 HOH A 59 364 129 HOH HOH . 
Q 5 HOH A 60 365 130 HOH HOH . 
Q 5 HOH A 61 366 133 HOH HOH . 
Q 5 HOH A 62 367 136 HOH HOH . 
Q 5 HOH A 63 368 137 HOH HOH . 
Q 5 HOH A 64 369 138 HOH HOH . 
Q 5 HOH A 65 370 139 HOH HOH . 
Q 5 HOH A 66 371 142 HOH HOH . 
Q 5 HOH A 67 372 144 HOH HOH . 
Q 5 HOH A 68 373 145 HOH HOH . 
Q 5 HOH A 69 374 147 HOH HOH . 
Q 5 HOH A 70 375 154 HOH HOH . 
Q 5 HOH A 71 376 155 HOH HOH . 
Q 5 HOH A 72 377 156 HOH HOH . 
Q 5 HOH A 73 378 157 HOH HOH . 
Q 5 HOH A 74 379 158 HOH HOH . 
Q 5 HOH A 75 380 160 HOH HOH . 
Q 5 HOH A 76 381 161 HOH HOH . 
Q 5 HOH A 77 382 166 HOH HOH . 
Q 5 HOH A 78 383 168 HOH HOH . 
Q 5 HOH A 79 384 171 HOH HOH . 
Q 5 HOH A 80 385 172 HOH HOH . 
Q 5 HOH A 81 386 174 HOH HOH . 
Q 5 HOH A 82 387 175 HOH HOH . 
Q 5 HOH A 83 388 176 HOH HOH . 
Q 5 HOH A 84 389 177 HOH HOH . 
Q 5 HOH A 85 390 178 HOH HOH . 
Q 5 HOH A 86 391 180 HOH HOH . 
Q 5 HOH A 87 392 181 HOH HOH . 
Q 5 HOH A 88 393 183 HOH HOH . 
Q 5 HOH A 89 394 185 HOH HOH . 
Q 5 HOH A 90 395 188 HOH HOH . 
Q 5 HOH A 91 396 192 HOH HOH . 
Q 5 HOH A 92 397 193 HOH HOH . 
Q 5 HOH A 93 398 195 HOH HOH . 
Q 5 HOH A 94 399 197 HOH HOH . 
Q 5 HOH A 95 400 198 HOH HOH . 
Q 5 HOH A 96 401 199 HOH HOH . 
Q 5 HOH A 97 402 201 HOH HOH . 
Q 5 HOH A 98 403 202 HOH HOH . 
Q 5 HOH A 99 404 203 HOH HOH . 
Q 5 HOH A 100 405 204 HOH HOH . 
Q 5 HOH A 101 406 205 HOH HOH . 
Q 5 HOH A 102 407 206 HOH HOH . 
Q 5 HOH A 103 408 207 HOH HOH . 
Q 5 HOH A 104 409 208 HOH HOH . 
Q 5 HOH A 105 410 212 HOH HOH . 
Q 5 HOH A 106 411 214 HOH HOH . 
Q 5 HOH A 107 412 218 HOH HOH . 
Q 5 HOH A 108 413 219 HOH HOH . 
Q 5 HOH A 109 414 220 HOH HOH . 
Q 5 HOH A 110 415 223 HOH HOH . 
Q 5 HOH A 111 416 225 HOH HOH . 
Q 5 HOH A 112 417 226 HOH HOH . 
Q 5 HOH A 113 418 227 HOH HOH . 
Q 5 HOH A 114 419 228 HOH HOH . 
Q 5 HOH A 115 420 229 HOH HOH . 
Q 5 HOH A 116 421 230 HOH HOH . 
Q 5 HOH A 117 422 231 HOH HOH . 
Q 5 HOH A 118 423 232 HOH HOH . 
R 5 HOH B 1 1307 13 HOH HOH . 
R 5 HOH B 2 1308 15 HOH HOH . 
R 5 HOH B 3 1309 16 HOH HOH . 
R 5 HOH B 4 1310 17 HOH HOH . 
R 5 HOH B 5 1311 18 HOH HOH . 
R 5 HOH B 6 1312 20 HOH HOH . 
R 5 HOH B 7 1313 21 HOH HOH . 
R 5 HOH B 8 1314 22 HOH HOH . 
R 5 HOH B 9 1315 25 HOH HOH . 
R 5 HOH B 10 1316 27 HOH HOH . 
R 5 HOH B 11 1317 29 HOH HOH . 
R 5 HOH B 12 1318 30 HOH HOH . 
R 5 HOH B 13 1319 32 HOH HOH . 
R 5 HOH B 14 1320 35 HOH HOH . 
R 5 HOH B 15 1321 41 HOH HOH . 
R 5 HOH B 16 1322 42 HOH HOH . 
R 5 HOH B 17 1323 43 HOH HOH . 
R 5 HOH B 18 1324 45 HOH HOH . 
R 5 HOH B 19 1325 50 HOH HOH . 
R 5 HOH B 20 1326 53 HOH HOH . 
R 5 HOH B 21 1327 56 HOH HOH . 
R 5 HOH B 22 1328 61 HOH HOH . 
R 5 HOH B 23 1329 62 HOH HOH . 
R 5 HOH B 24 1330 65 HOH HOH . 
R 5 HOH B 25 1331 66 HOH HOH . 
R 5 HOH B 26 1332 69 HOH HOH . 
R 5 HOH B 27 1333 71 HOH HOH . 
R 5 HOH B 28 1334 72 HOH HOH . 
R 5 HOH B 29 1335 74 HOH HOH . 
R 5 HOH B 30 1336 76 HOH HOH . 
R 5 HOH B 31 1337 77 HOH HOH . 
R 5 HOH B 32 1338 78 HOH HOH . 
R 5 HOH B 33 1339 80 HOH HOH . 
R 5 HOH B 34 1340 83 HOH HOH . 
R 5 HOH B 35 1341 84 HOH HOH . 
R 5 HOH B 36 1342 85 HOH HOH . 
R 5 HOH B 37 1343 86 HOH HOH . 
R 5 HOH B 38 1344 87 HOH HOH . 
R 5 HOH B 39 1345 90 HOH HOH . 
R 5 HOH B 40 1346 91 HOH HOH . 
R 5 HOH B 41 1347 95 HOH HOH . 
R 5 HOH B 42 1348 96 HOH HOH . 
R 5 HOH B 43 1349 98 HOH HOH . 
R 5 HOH B 44 1350 99 HOH HOH . 
R 5 HOH B 45 1351 101 HOH HOH . 
R 5 HOH B 46 1352 104 HOH HOH . 
R 5 HOH B 47 1353 105 HOH HOH . 
R 5 HOH B 48 1354 106 HOH HOH . 
R 5 HOH B 49 1355 107 HOH HOH . 
R 5 HOH B 50 1356 111 HOH HOH . 
R 5 HOH B 51 1357 114 HOH HOH . 
R 5 HOH B 52 1358 116 HOH HOH . 
R 5 HOH B 53 1359 117 HOH HOH . 
R 5 HOH B 54 1360 121 HOH HOH . 
R 5 HOH B 55 1361 122 HOH HOH . 
R 5 HOH B 56 1362 123 HOH HOH . 
R 5 HOH B 57 1363 126 HOH HOH . 
R 5 HOH B 58 1364 127 HOH HOH . 
R 5 HOH B 59 1365 131 HOH HOH . 
R 5 HOH B 60 1366 132 HOH HOH . 
R 5 HOH B 61 1367 134 HOH HOH . 
R 5 HOH B 62 1368 135 HOH HOH . 
R 5 HOH B 63 1369 140 HOH HOH . 
R 5 HOH B 64 1370 141 HOH HOH . 
R 5 HOH B 65 1371 143 HOH HOH . 
R 5 HOH B 66 1372 146 HOH HOH . 
R 5 HOH B 67 1373 148 HOH HOH . 
R 5 HOH B 68 1374 149 HOH HOH . 
R 5 HOH B 69 1375 150 HOH HOH . 
R 5 HOH B 70 1376 151 HOH HOH . 
R 5 HOH B 71 1377 152 HOH HOH . 
R 5 HOH B 72 1378 153 HOH HOH . 
R 5 HOH B 73 1379 159 HOH HOH . 
R 5 HOH B 74 1380 162 HOH HOH . 
R 5 HOH B 75 1381 163 HOH HOH . 
R 5 HOH B 76 1382 164 HOH HOH . 
R 5 HOH B 77 1383 165 HOH HOH . 
R 5 HOH B 78 1384 167 HOH HOH . 
R 5 HOH B 79 1385 169 HOH HOH . 
R 5 HOH B 80 1386 170 HOH HOH . 
R 5 HOH B 81 1387 173 HOH HOH . 
R 5 HOH B 82 1388 179 HOH HOH . 
R 5 HOH B 83 1389 182 HOH HOH . 
R 5 HOH B 84 1390 184 HOH HOH . 
R 5 HOH B 85 1391 186 HOH HOH . 
R 5 HOH B 86 1392 187 HOH HOH . 
R 5 HOH B 87 1393 189 HOH HOH . 
R 5 HOH B 88 1394 190 HOH HOH . 
R 5 HOH B 89 1395 191 HOH HOH . 
R 5 HOH B 90 1396 194 HOH HOH . 
R 5 HOH B 91 1397 196 HOH HOH . 
R 5 HOH B 92 1398 200 HOH HOH . 
R 5 HOH B 93 1399 209 HOH HOH . 
R 5 HOH B 94 1400 210 HOH HOH . 
R 5 HOH B 95 1401 211 HOH HOH . 
R 5 HOH B 96 1402 213 HOH HOH . 
R 5 HOH B 97 1403 215 HOH HOH . 
R 5 HOH B 98 1404 216 HOH HOH . 
R 5 HOH B 99 1405 217 HOH HOH . 
R 5 HOH B 100 1406 221 HOH HOH . 
R 5 HOH B 101 1407 222 HOH HOH . 
R 5 HOH B 102 1408 224 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . P 4 22.143 39.29 18.067 1 31.85 ? C1 GOL 1306 B 1 
HETATM 2 O O1 GOL . . . P 4 22.195 38.413 16.946 1 32.79 ? O1 GOL 1306 B 1 
HETATM 3 C C2 GOL . . . P 4 21.529 38.618 19.298 1 30.7 ? C2 GOL 1306 B 1 
HETATM 4 O O2 GOL . . . P 4 20.193 39.031 19.419 1 31.27 ? O2 GOL 1306 B 1 
HETATM 5 C C3 GOL . . . P 4 22.29 38.936 20.58 1 30.6 ? C3 GOL 1306 B 1 
HETATM 6 O O3 GOL . . . P 4 21.532 38.593 21.729 1 30.11 ? O3 GOL 1306 B 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           229 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#